| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,239,099 | C→G | 5.1% | intergenic (‑68/‑307) | argF ← / → PP_1080 | ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,239,099 | 0 | C | G | 5.1% | 241.7 / 4.1 | 79 | intergenic (‑68/‑307) | argF/PP_1080 | ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (37/38); new base G (2/2); total (39/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.77e-01 | |||||||||||
AGCTCGATGCCGTGGCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTAT > NC_002947/1238952‑1239247 | aGCTCGATGCCGTGGCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTg > 1:180770/1‑150 (MQ=255) gCTCGATGCCGTGGCGGATCACCCCGAGCAATTCGTCTGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTgc > 2:1397866/1‑150 (MQ=255) gCTCGATGCCGTGGCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTgc > 2:1607166/1‑150 (MQ=255) cGATGCCGTGGCGGATCACCCCGAGCAATTCGTCTGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTgcggc < 1:1397866/150‑1 (MQ=255) cGATGCCGTGGCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTgcggc < 2:815928/150‑1 (MQ=255) ggATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTgc < 2:89554/135‑1 (MQ=255) ggATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTgc > 1:89554/1‑135 (MQ=255) tccccgcGAGCAATGCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACgggg < 2:243200/144‑1 (MQ=255) cACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGc < 1:847134/150‑1 (MQ=255) ccccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAg > 1:825595/1‑137 (MQ=255) ccccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAg < 2:825595/137‑1 (MQ=255) ccccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCGCGGGGCgg > 2:637434/1‑150 (MQ=255) ccccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCgg < 1:702409/150‑1 (MQ=255) ccccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCgg > 1:1921892/1‑150 (MQ=255) cccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGa > 2:809584/1‑150 (MQ=255) cGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACTGGGGTGGCCTGCGGCGTAAGCCGCAAGGGGCGGACg > 1:877981/1‑150 (MQ=255) gAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGa > 1:744561/1‑150 (MQ=255) cAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAAt > 1:1630871/1‑150 (MQ=255) aaTTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATa < 2:1559422/150‑1 (MQ=255) aTTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAg < 1:1082937/150‑1 (MQ=255) aTTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAg > 2:1082937/1‑150 (MQ=255) ttCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACGTGCGGCTTACGCCGCa > 1:1602897/1‑132 (MQ=255) ttCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACGTGCGGCTTACGCCGCa < 1:1897037/132‑1 (MQ=255) ttCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACGTGCGGCTTACGCCGCa > 2:1897037/1‑132 (MQ=255) ttCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACGTGCGGCTTACGCCGCa < 2:1602897/132‑1 (MQ=255) gtcgGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGAACTAGGCGGACGaaagtgtgac > 2:111003/1‑143 (MQ=255) tgAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCaa > 1:883185/1‑150 (MQ=255) aaGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATa < 1:762843/150‑1 (MQ=255) cagcagGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAgg < 2:1836201/132‑1 (MQ=255) cagcagGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAgg > 1:1836201/1‑132 (MQ=255) agcagGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATaa < 2:883185/150‑1 (MQ=255) agcagGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATaa < 1:809584/150‑1 (MQ=255) gggAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGAAACGGTATGCAGGTCGACCATATGGCGTGAGTGGACAACGGGGATGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTaa > 1:1492919/1‑150 (MQ=255) ggAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTaaa > 1:330432/1‑150 (MQ=255) aaaGCGCCTGGCGCGCATGAGTCGCTGCCTTAGCTGCAACGGTAGGCAGGGCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGc < 1:1567371/150‑1 (MQ=255) ccTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAg > 2:1707135/1‑113 (MQ=255) ccTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAg < 1:1707135/113‑1 (MQ=255) ccTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAg > 2:1413330/1‑150 (MQ=255) tAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCCGAGTACTATAAGTAAATGTCGCCTGAAGcc > 1:974789/1‑150 (MQ=255) tCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAgggg < 2:330432/150‑1 (MQ=255) tCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAgggg > 2:1764891/1‑150 (MQ=255) tCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAgggg > 1:1821429/1‑150 (MQ=255) cATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAggggg < 1:637434/150‑1 (MQ=255) gAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGaa < 2:1630871/150‑1 (MQ=255) tGACCACCTTATGTGCCCCGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGCACTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAg < 1:1529641/150‑1 (MQ=255) tACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAgcggc < 2:744561/150‑1 (MQ=255) caCCTTCTCTGCAAGGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGAGGGGTAAGCCGCACGTGGCGGACGAAATAGGCAAAGGCGCAATACTATAAGTAAATGTCGCTTGAAGCCAAGGGGGGAAAAgcggc < 1:867402/149‑1 (MQ=255) ccgtATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGt > 1:1936353/4‑150 (MQ=255) ccTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATaa > 1:504548/1‑112 (MQ=255) ccTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATaa < 2:504548/112‑1 (MQ=255) ttATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAGAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGa > 2:1503850/1‑150 (MQ=255) ttATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGa > 2:1492158/1‑150 (MQ=255) ctATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATa < 2:1771280/88‑1 (MQ=255) ctATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATa > 1:1771280/2‑89 (MQ=255) aTCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAtt < 2:865413/150‑1 (MQ=255) aTCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAtt < 1:1764891/150‑1 (MQ=255) tGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgca > 2:1634131/1‑150 (MQ=255) gCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAAt > 2:1667848/1‑82 (MQ=255) gCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAAt < 1:1667848/82‑1 (MQ=255) cAACGGCATGGAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaa < 1:103872/150‑1 (MQ=255) aaCGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaag > 1:1588380/1‑150 (MQ=255) ggaTGCAGGTCGCCCGGATGGTTTTTTTTGACAACTGGGGTGACCTGCGGCGTAAGCCGCCCGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGGCCCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtg < 2:877981/148‑1 (MQ=255) gTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACtat < 2:1549790/96‑1 (MQ=255) gTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACtat > 1:1549790/1‑96 (MQ=255) gCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgc < 2:1821429/150‑1 (MQ=255) aGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAgggg > 2:955908/1‑117 (MQ=255) aGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAgggg < 1:955908/117‑1 (MQ=255) tCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgcaaagg > 1:783946/1‑150 (MQ=255) tATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCtt < 2:1492919/150‑1 (MQ=255) ggTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTAc < 2:1921892/150‑1 (MQ=255) ggTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTAc < 1:1712392/150‑1 (MQ=255) ttttttttGACAACTGTGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTAccc > 2:1090037/1‑150 (MQ=255) ttttttGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTc > 2:152492/1‑141 (MQ=255) ttttttGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTc < 1:152492/141‑1 (MQ=255) tttGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTgg > 1:62063/1‑150 (MQ=255) ggggTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGt < 1:1634131/150‑1 (MQ=255) tGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAgggg > 2:1504611/1‑83 (MQ=255) tGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAgggg < 1:1504611/83‑1 (MQ=255) aCCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTa < 1:1533344/150‑1 (MQ=255) ccTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTAt < 1:1503850/150‑1 (MQ=255) cTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGt < 2:113200/56‑1 (MQ=255) cTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGt > 1:113200/1‑56 (MQ=255) | AGCTCGATGCCGTGGCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTAT > NC_002947/1238952‑1239247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |