| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,264,630 | G→C | 5.1% | R266G (CGG→GGG) | PP_1106 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,264,630 | 0 | G | C | 5.1% | 256.2 / 4.7 | 78 | R266G (CGG→GGG) | PP_1106 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (41/33); new base C (2/2); total (43/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01 | |||||||||||
CCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGCCTGCGT > NC_002947/1264482‑1264779 | ccTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCcgg > 2:922134/1‑150 (MQ=255) ttCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCggcgggc > 2:1758652/1‑150 (MQ=255) gTGAGGTAGCGCACCAGGACCTCGACCGAGCCGTAAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGcgccg > 1:374445/1‑150 (MQ=255) ggTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCAAGACGAGCGTTTGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTa > 1:1574766/1‑150 (MQ=255) gTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGTCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGGCGCCCGCCGGCGGcgcggcg < 1:622339/150‑4 (MQ=255) aGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTagca < 1:4184/150‑1 (MQ=255) gcACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAgcagca < 1:1042597/150‑1 (MQ=255) aCCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCGGTCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGGAGCAGCATc > 1:1591713/1‑150 (MQ=255) aCCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATc > 2:1269546/1‑150 (MQ=255) aCCTCGACCGATCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCg < 1:180965/150‑1 (MQ=255) cTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCcggcg > 1:916165/1‑123 (MQ=255) cTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCcggcg < 2:916165/123‑1 (MQ=255) gACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGc > 1:1365691/1‑150 (MQ=255) agtgaCCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCAAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACt < 2:756821/150‑1 (MQ=255) tgaCCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACCGt > 2:819569/1‑150 (MQ=255) cATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATc > 2:665750/1‑150 (MQ=255) aCCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGGCGCCCGCCGGCGGcgcggcgt > 1:1254689/1‑107 (MQ=255) aCCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGGCGCCCGCCGGCGGcgcggcgt < 2:1254689/111‑5 (MQ=255) aCCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCa > 1:1308908/1‑150 (MQ=255) aCCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCa > 1:580155/1‑150 (MQ=255) ttGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACg < 2:357882/150‑1 (MQ=255) gggCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAACACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGgc < 2:1599498/150‑1 (MQ=255) aCCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGATCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCAt > 2:1417998/1‑150 (MQ=255) ccGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATc < 2:1308908/150‑1 (MQ=255) tGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTa > 1:1774907/1‑150 (MQ=255) ggCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTag < 1:1275620/91‑1 (MQ=255) ggCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTag > 2:1275620/1‑91 (MQ=255) ggCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTAc > 2:173534/1‑150 (MQ=255) ggCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTAc > 2:1356180/1‑150 (MQ=255) ccAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTg < 1:1253457/150‑1 (MQ=255) cAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGc > 1:276730/1‑150 (MQ=255) cAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGc > 1:409954/1‑150 (MQ=255) cAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGc > 1:1711939/1‑150 (MQ=255) tGGCCCAGTGCAGGCCCAGCGCGGCGGCGTGTTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCTCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCAc < 1:99692/150‑1 (MQ=255) ccAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATc > 2:1269032/1‑117 (MQ=255) ccAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATc < 1:1269032/117‑1 (MQ=255) ccAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGc > 2:1332358/1‑150 (MQ=255) ccAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGc > 2:682344/1‑150 (MQ=255) ccAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGc > 1:462907/1‑150 (MQ=255) cAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCt < 2:1365691/150‑1 (MQ=255) agagCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTAc < 2:1004722/138‑1 (MQ=255) agagCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTAc > 1:1004722/1‑138 (MQ=255) gCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACg < 1:665750/150‑1 (MQ=255) caggccaggcCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTgg > 2:1413024/1‑92 (MQ=255) caggccaggcCAGTCGGCGTGGTCGGACAGCACAAAGCCCAGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTgg < 1:1413024/92‑1 (MQ=255) gccaggccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACggggg > 2:1700697/1‑150 (MQ=255) aggccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGgcgc < 2:1774907/150‑1 (MQ=255) gccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGcc < 2:1856131/130‑1 (MQ=255) gccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGcc > 1:1856131/1‑130 (MQ=255) gccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCa > 1:954018/1‑150 (MQ=255) gccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCa > 2:1237468/1‑150 (MQ=255) gccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCA‑CCAGCCGCTGGCGAAg > 2:1725779/1‑88 (MQ=255) gccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCA‑CCAGCCGCTGGCGAAg < 1:1725779/88‑1 (MQ=255) gTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGTCGCCAGGAc < 2:1574766/150‑1 (MQ=255) gTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGAc < 1:1700697/150‑1 (MQ=255) gTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGAc < 2:954018/150‑1 (MQ=255) tCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAg < 1:840257/84‑1 (MQ=255) tCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCACCATCCAGCCGCTGGCGAAg > 2:840257/1‑84 (MQ=255) ttgctCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGc < 2:132673/146‑1 (MQ=255) gACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGgcgc > 1:1932706/1‑150 (MQ=255) gCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCgcagca < 1:1440953/150‑1 (MQ=255) cacaAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGcagcag > 2:1702063/1‑150 (MQ=255) acaAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTTATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGt > 1:622696/1‑150 (MQ=255) acaAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGt < 1:1012451/150‑1 (MQ=255) acaAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGt > 2:1012451/1‑150 (MQ=255) caAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTg > 2:441839/1‑150 (MQ=255) aaaGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCgca < 2:1397056/143‑1 (MQ=255) aaaGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCgca > 1:1397056/1‑143 (MQ=255) aaaGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTgg > 1:1231847/1‑150 (MQ=255) aaGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGa < 2:1231847/150‑1 (MQ=255) ccccGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGt < 1:1179406/129‑1 (MQ=255) ccccGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGt > 2:1179406/1‑129 (MQ=255) ccccGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCg < 2:276730/150‑1 (MQ=255) cccGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGt > 2:933816/1‑150 (MQ=255) ccGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGtt < 1:682344/150‑1 (MQ=255) tCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGc > 2:194968/1‑43 (MQ=255) tCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGc < 1:194968/43‑1 (MQ=255) aCGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGc > 2:384031/1‑122 (MQ=255) aCGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGc < 1:384031/122‑1 (MQ=255) aCGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGa > 2:1872536/1‑150 (MQ=255) gcggcgcCCGCCGGCGGCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATc > 2:1236429/1‑150 (MQ=255) gccgccGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGc < 2:409954/150‑1 (MQ=255) ccgccgGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGcc < 2:580155/150‑1 (MQ=255) ccgccgGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGcc < 2:1591713/150‑1 (MQ=255) gccgGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGCCTg < 1:922134/150‑1 (MQ=255) ccgGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGCCTGc > 2:1901629/1‑150 (MQ=255) ggcgggcgCCGCGTAGCAGCATCCAGCAGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGCCTGCGt > 2:507747/1‑150 (MQ=255) | CCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCGCCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGCCTGCGT > NC_002947/1264482‑1264779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |