| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 122,650 | A→C | 5.0% | R103R (CGT→CGG) | PP_0116 ← | putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 122,650 | 0 | A | C | 5.0% | 291.9 / 5.8 | 99 | R103R (CGT→CGG) | PP_0116 | putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (41/53); new base C (2/3); total (43/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.98e-01 | |||||||||||
CTTGGCGCTGTCGGGTCGATGATGCGTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGCCTGCAGAGCTGCAAGCTGGTCT > NC_002947/122501‑122797 | cTTGGCGCTGTCGGGTCGATGATGCGTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCa < 1:393649/150‑1 (MQ=255) ggCGCTGTCGGGTCGATGATGCGTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACgg < 1:1356790/150‑1 (MQ=255) ggCGCTGTCGGGTCGATGATGCGTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCGTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACgg < 2:353658/150‑1 (MQ=255) cgcTGTCGGGTCGATGATGCGTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGc < 1:954842/150‑1 (MQ=255) gcTGTCGGGTCGATGATGCGTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGcc > 2:458128/1‑150 (MQ=255) ccggccggTCGATTATGCGTTCCCCGTGTCTGGCTTCGGCGCCTTTCAGCGCCGCTTCAGCCTTTCCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCATTGACCGCTGGCGTCTGCGGCATCAGGGCCCGGGCACGGGCCa < 2:418383/144‑1 (MQ=255) cTGTCGGGTCGATGATGCGTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGTGCCCGGGccc < 2:8084/150‑2 (MQ=255) gggTCGATGATGCGTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGcgcg > 2:867432/1‑150 (MQ=255) tCGATGATGCGTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTa > 1:1460798/1‑150 (MQ=255) atgCGTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGTTCCCGGGCACGGGCCAGCGCGGTAGCTGcc > 2:1286636/1‑150 (MQ=255) tgCGTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGc < 1:151240/133‑1 (MQ=255) tgCGTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGc > 2:151240/1‑133 (MQ=255) gTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGt > 2:1016555/1‑150 (MQ=255) tGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCCGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGtt < 1:1474997/150‑1 (MQ=255) ccTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTca > 1:1569328/1‑150 (MQ=255) gggCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATc < 1:1546224/150‑1 (MQ=255) ttCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGACACGTTTTCATCGCCCT‑TCTg > 2:932081/1‑150 (MQ=255) ttCGCCGGCTTTCATCCCCGCTTCACCCTTTTCCAGCTCGGCCTTGCGAGCCTGACTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGACCCGCTCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTg < 1:932081/150‑1 (MQ=255) ggcTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGAc > 1:251088/1‑150 (MQ=255) tttCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGAt < 2:1657181/150‑1 (MQ=255) gccgcTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTa > 2:240548/1‑108 (MQ=255) gccgcTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTa < 1:240548/108‑1 (MQ=255) cgcTTCAGCCTTTTCCAGCTCGGCCTTGCGGGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGc < 1:1858263/125‑1 (MQ=255) cgcTTCAGCCTTTTCCAGCTCGGCCTTGCGGGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGc > 2:1858263/1‑125 (MQ=255) cgcTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACg < 2:251088/150‑1 (MQ=255) gcTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGt < 2:1540589/150‑1 (MQ=255) cAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCa > 1:97446/1‑150 (MQ=255) cAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCa < 1:1853226/150‑1 (MQ=255) cAGCCTTTTCCAGCGCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGGGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCa < 2:1145427/150‑1 (MQ=255) aGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGTCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAg < 2:289942/150‑1 (MQ=255) aGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAg < 2:1623381/150‑1 (MQ=255) aGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAg > 2:171001/1‑150 (MQ=255) aGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAg < 1:1719046/150‑1 (MQ=255) ccTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGt > 2:599615/1‑150 (MQ=255) ttttCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTaa > 1:1558848/1‑150 (MQ=255) ccgCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGCCACGGGACAGCACGGTAGCTGCCCCGTTCACA‑CACCCTCTCTGCCGGTCGATCTGGCTACGTTGCAGGTAAGCTTc < 2:1192810/148‑1 (MQ=255) aGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTca > 2:621773/1‑103 (MQ=255) aGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTca < 1:621773/103‑1 (MQ=255) aGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCg > 1:753987/1‑150 (MQ=255) aGCTCGGCCTTGCGAGCCTGAGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCAAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCg < 2:649621/150‑1 (MQ=255) ggCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAg < 1:1705058/150‑1 (MQ=255) ccTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGtt > 1:1231092/1‑150 (MQ=255) ttGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTgg < 2:97446/150‑1 (MQ=255) ttGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTgg > 1:375898/1‑150 (MQ=255) gAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCgg > 2:1317921/1‑75 (MQ=255) gAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCgg < 1:1317921/75‑1 (MQ=255) gAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCt > 2:1282310/1‑150 (MQ=255) aGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTg < 2:1460798/150‑1 (MQ=255) gCCTGGGTCCCGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCTCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTgg < 1:1850379/150‑1 (MQ=255) tGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTAt > 2:1062998/1‑150 (MQ=255) gggTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCCGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTAtt < 1:230062/150‑1 (MQ=255) aCGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGttggc < 2:109862/80‑4 (MQ=255) aCGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGttggc > 1:109862/1‑77 (MQ=255) aCGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTcc > 1:156302/1‑150 (MQ=255) aCGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTcc > 1:1439009/1‑150 (MQ=255) aCGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTcc < 1:1282310/150‑1 (MQ=255) cGGCATCCCCGCCAGTGACCGCTGGCGCTTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCTCCTCGCCCT‑TCTGCGAAGGGATGAGGGGTTGGTTGAGGGAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCa < 1:1492929/150‑1 (MQ=255) cGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCa > 1:1707613/1‑150 (MQ=255) ggCATCCCCCCCAGTGTCCGCTGGCGCCTGCGGCAGCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCACCAGCGCCCGCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAg < 2:1036691/150‑1 (MQ=255) tCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGt < 1:795519/150‑1 (MQ=255) ccGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGca > 1:351771/1‑150 (MQ=255) ccGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGca < 1:1927938/150‑1 (MQ=255) ccGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGca < 2:1354899/150‑1 (MQ=255) ccGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGCTACCCTTCCGCGAGGTGGCGCTGGTATTGTTACAGGCGTGca > 2:154645/1‑150 (MQ=255) cGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGcat > 1:523494/1‑150 (MQ=255) aGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCatcatc < 1:171001/150‑1 (MQ=255) gTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATcc < 1:1016555/150‑1 (MQ=255) ccGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGc > 2:823752/1‑52 (MQ=255) ccGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGc < 1:823752/52‑1 (MQ=255) tGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTaa > 1:278404/1‑97 (MQ=255) tGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTaa < 2:278404/97‑1 (MQ=255) ggCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTgg < 1:154645/150‑1 (MQ=255) ggCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTgg < 2:1231092/150‑1 (MQ=255) gcgcCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTggg < 2:375898/150‑1 (MQ=255) cgcCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGc < 2:753987/150‑1 (MQ=255) ccTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACt > 2:540407/1‑144 (MQ=255) ccTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACt < 1:540407/144‑1 (MQ=255) ccTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGAAGTTCGAGCGACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGCCt < 1:234512/150‑1 (MQ=255) gCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGCCTGCa < 2:781785/150‑1 (MQ=255) gCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGCCTGCa < 2:629614/150‑1 (MQ=255) cGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAg > 2:533332/1‑120 (MQ=255) cGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAg < 1:533332/120‑1 (MQ=255) cATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAg < 2:498648/117‑1 (MQ=255) cATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAg > 1:498648/1‑117 (MQ=255) aTCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGcatca < 1:1267380/126‑1 (MQ=255) aTCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGcatca > 2:1267380/1‑126 (MQ=255) cAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAg < 1:791555/114‑1 (MQ=255) cAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAg > 2:791555/1‑114 (MQ=255) cAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGCCTGCAGAGCTGc < 1:867432/150‑1 (MQ=255) tggCCCGTGCCCGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTg > 1:1919709/2‑106 (MQ=255) tggCCCGTGCCCGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTg < 2:1919709/105‑1 (MQ=255) tggCCCGTGCCCGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGCCTGCa > 2:863261/2‑141 (MQ=255) tggCCCGTGCCCGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGCCTGCa < 1:863261/140‑1 (MQ=255) cccGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGCCTGCAGAGCTGCAAGCt > 2:757393/1‑150 (MQ=255) cccGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGAGACTGCGCCTGCAGAGCTGCAATCt > 2:258445/1‑150 (MQ=255) ccGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGCCTGCAGAGCt < 2:516370/142‑1 (MQ=255) ccGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGCCTGCAGAGCt > 1:516370/1‑142 (MQ=255) ccGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGCCTGCAGAGCTGCAAGCTg < 2:351771/150‑1 (MQ=255) ggCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGCCTGCAGAGCTGCAAGCTGGTc > 1:793066/1‑150 (MQ=255) gCACGGGCCAGCGCGGTAGCTGCCGCGTTCACACCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCAAGTTGGCGCTGGTATTGTTCCAGGCGTGCATAATCCGGCGACTGGGCCTGCAGAGCTGCAAGCTGGTCt > 1:646274/1‑150 (MQ=255) | CTTGGCGCTGTCGGGTCGATGATGCGTGCCTCGGGCTTGGCTTCGGCGGCTTTCAGCGCCGCTTCAGCCTTTTCCAGCTCGGCCTTGCGAGCCTGGGTCACGGCATCCCCGCCAGTGACCGCTGGCGCCTGCGGCATCAGGGCCCGGGCACGGGCCAGCGCGGTAGCTGCCGCGTTCACATCGCCCT‑TCTGCAGGACGATCTGGCTACGTTGCAGGTAAGCTTCGGCCAGTTGGCGCTGGTATTGTTCCAGGCGTGCATCATCCGGCGACTGGGCCTGCAGAGCTGCAAGCTGGTCT > NC_002947/122501‑122797 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |