| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,469,815 | A→G | 7.4% | V112A (GTG→GCG) | algK ← | alginate biosynthesis protein AlgK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,469,815 | 0 | A | G | 7.4% | 234.9 / 6.8 | 83 | V112A (GTG→GCG) | algK | alginate biosynthesis protein AlgK |
| Reads supporting (aligned to +/- strand): ref base A (39/37); new base G (4/2); total (43/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.92e-01 | |||||||||||
GTTGACCTTGGGGAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGT > NC_002947/1469673‑1469962 | gTTGACCTTGGGGAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCCGGCGTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACcagcag < 1:1593296/150‑1 (MQ=255) ttGACCTTGGGGAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAgg > 1:46288/1‑150 (MQ=255) gACCTTGGGGAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAggcg < 1:294966/150‑1 (MQ=255) ccTTGGGGAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGAGGTCGGCGTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAggcggc < 2:1036307/150‑1 (MQ=255) gggAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCGCCTGCTGGTGGCCAAgc < 2:1091381/150‑2 (MQ=255) gggAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAgg < 1:500118/150‑1 (MQ=255) aaaCTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGgcgc < 2:89124/150‑1 (MQ=255) tGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTgg < 2:1659891/150‑1 (MQ=255) tAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCACTAACTCGAGCACCGCTTAAACCGCCATCAGCCTCCCTCACGTGCGGCCTTGGTGCTGTCCGGCTTTGCCACCAGCAGGCGTCCAAGGCGCGCTTGGGCGCGt < 2:709280/150‑1 (MQ=255) cTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGc > 2:1500771/1‑150 (MQ=255) cTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGc < 2:777212/150‑1 (MQ=255) cTGAGGTAGAGCATTGCCAGCGGAATCAGGGGATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGACACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTgga > 2:43750/1‑149 (MQ=255) tAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTg > 2:1220100/1‑150 (MQ=255) agagCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCACGGCGCGCTTGGGCGCGTGGCGaggagg > 2:602435/1‑145 (MQ=255) gagCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTACGGCGTTGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTggc > 1:1392053/1‑150 (MQ=255) agCATTGAAAGAGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTggcg > 2:1928595/1‑150 (MQ=255) cATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGAGCGCTTGGGCGCGTGGCGACGGggaggg > 1:372237/1‑149 (MQ=255) gCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTggg > 2:244369/1‑127 (MQ=255) gCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTggg < 1:244369/127‑1 (MQ=255) gCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCa < 1:1500771/150‑1 (MQ=255) cAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGAGAAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAgc > 1:102227/1‑150 (MQ=255) gCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAgcgc > 1:1412241/1‑150 (MQ=255) gCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAgcgc < 1:1928595/150‑1 (MQ=255) gCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGAGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAgcgc > 1:10364/1‑150 (MQ=255) aGGGTATTGCTTTGGGCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTg < 2:423539/150‑1 (MQ=255) gTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGcc > 2:1234748/1‑150 (MQ=255) cTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCt > 1:516909/1‑150 (MQ=255) gCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTg < 2:1440940/107‑1 (MQ=255) gCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTg > 1:1440940/1‑107 (MQ=255) gCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCtt > 2:986663/1‑150 (MQ=255) cccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGCCTTGGCCGCCTGCTGGTGGCCAAgcc < 1:1713674/91‑3 (MQ=25) cccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGCCTTGGCCGCCTGCTGGTGGCCAAgcc > 2:1713674/1‑89 (MQ=25) ccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCgg < 2:760003/141‑1 (MQ=255) ccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCgg > 1:760003/1‑141 (MQ=255) ccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCt < 1:445079/147‑1 (MQ=255) ccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCt > 2:445079/1‑147 (MQ=255) tGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGAtt > 1:480506/1‑150 (MQ=255) cgcgGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGa < 1:681110/150‑1 (MQ=255) cgcgGCCTGCTTGAGCAGCGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCTTTTTTTTGTGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGa < 1:119671/150‑1 (MQ=255) cgGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCTCGTGTCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAgg < 1:43750/150‑1 (MQ=255) cgGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAgg < 1:900662/150‑1 (MQ=255) ggCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAggg < 1:1064274/150‑1 (MQ=255) ccTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGAttt < 2:1801487/141‑1 (MQ=255) ccTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGAttt > 1:1801487/1‑141 (MQ=255) cTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTg < 2:1485042/118‑1 (MQ=255) cTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTg > 1:1485042/1‑118 (MQ=255) gAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTGCTTGGTTTTCGGGGGGGGGCgggg > 2:916039/1‑149 (MQ=255) aGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTg < 1:1220100/150‑1 (MQ=255) gCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGa < 1:1083293/107‑1 (MQ=255) gCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGa > 2:1083293/1‑107 (MQ=255) cAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGc > 2:1111301/1‑150 (MQ=255) gTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTgg > 1:1666293/1‑72 (MQ=255) gTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTgg < 2:1666293/72‑1 (MQ=255) gTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCAcc > 1:1290102/1‑150 (MQ=255) cGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGa < 2:1253438/150‑1 (MQ=255) ttCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTc < 1:1111301/150‑1 (MQ=255) cTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGc > 1:714074/1‑150 (MQ=255) tCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCCTGGGGTCCGcc > 2:49096/1‑150 (MQ=255) cccattCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCa < 1:1928342/146‑1 (MQ=255) aCGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAg > 1:757028/1‑150 (MQ=255) gTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGc > 1:663298/1‑150 (MQ=255) gTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGc > 2:1768264/1‑150 (MQ=255) tCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCg < 1:986663/150‑1 (MQ=255) ccTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACtt > 1:388191/1‑150 (MQ=255) gTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCt < 2:1644279/150‑1 (MQ=255) tGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCtt < 1:1234748/150‑1 (MQ=255) tGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGc > 1:1448410/1‑150 (MQ=255) gTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCt < 2:480506/150‑1 (MQ=255) gTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCt < 1:602435/150‑1 (MQ=255) ccGGCTTGGCCACCGGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTgc < 1:1926399/140‑1 (MQ=255) ccGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTgc > 2:1926399/1‑140 (MQ=255) cGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCgg > 2:684131/1‑106 (MQ=255) cGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCgg < 1:684131/106‑1 (MQ=255) cGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCt > 1:1272126/1‑116 (MQ=255) cGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCt < 2:1272126/116‑1 (MQ=255) gccTTGGCCGCCTGCTGGTGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGACCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAg > 2:1612851/3‑150 (MQ=255) gCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTc < 1:141105/121‑1 (MQ=255) gCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTc > 2:141105/1‑121 (MQ=255) gCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGc > 1:519543/1‑150 (MQ=255) ccTTGGCCGCCTGCTGGTGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGc > 2:453192/2‑150 (MQ=255) cTTGGCCGCCTGCTGGTGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGcc > 1:1037507/1‑150 (MQ=255) ttGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGAGTTGCGCTTCGCTGTAGccc > 2:1276544/1‑150 (MQ=255) gCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAgg < 2:757028/150‑1 (MQ=255) ccaccaGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGt > 2:676432/1‑150 (MQ=255) | GTTGACCTTGGGGAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGT > NC_002947/1469673‑1469962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |