| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,621,920 | G→A | 5.5% | L264L (CTG→CTA) ‡ | PP_1421 → | sensor histidine kinase TctE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,621,920 | 0 | G | A | 5.5% | 263.5 / 4.4 | 90 | L264L (CTG→CTA) ‡ | PP_1421 | sensor histidine kinase TctE |
| Reads supporting (aligned to +/- strand): ref base G (45/40); new base A (3/2); total (48/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.01e-01 | |||||||||||
CTTGCGAGCGTTGCCGGTGGTGCAGGTGCAGCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTCCCTGGCGCGGGTCGAGAATG > NC_002947/1621773‑1622065 | cTTGCGAGCGTTGCCGGTGGTGCAGGTGCAGCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTggc < 2:1472094/150‑1 (MQ=255) gAGCGTTGCCGGTGGTGCAGGTGCAGCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGt > 1:1654743/1‑150 (MQ=255) aGCGTTGCCGGTGGTGCAGGTGCAGCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGtt < 1:296405/150‑1 (MQ=255) gTTGCCGGTGGTGCAGGTGCAGCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCGCAGCGCATAGCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGaa < 2:1928000/150‑1 (MQ=255) gTTGCCGGTGGTGCAGGTGCAGCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGaa < 1:847485/150‑1 (MQ=255) cGGTGGTGCAGGTGCAGCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCAc < 1:1447627/150‑1 (MQ=255) cGGTGGTGCAGGTGCAGCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCAc > 2:1261128/1‑150 (MQ=255) ggtggtGGAGGTGCAGCGCGAACTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACTAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACg > 2:283923/1‑150 (MQ=255) gtggtgCAGGTGCAGCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACgt > 1:1191591/1‑150 (MQ=255) gcaggtgcagCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGa < 2:540805/150‑1 (MQ=255) caggtgcagCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAg < 2:1419352/150‑1 (MQ=255) gtgcagCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGCGAGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCATGTGTCGAGCTg > 2:377457/1‑150 (MQ=255) tgcagCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTgg > 2:535986/1‑150 (MQ=255) gcagCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTCCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTggg > 1:326960/1‑150 (MQ=255) cagCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGc < 1:1015340/150‑1 (MQ=255) cagCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGc < 2:1345285/150‑1 (MQ=255) cagCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGc < 2:1515201/150‑1 (MQ=255) cagCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTGCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGc > 2:943908/1‑150 (MQ=255) gcgcGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCtt > 1:714233/1‑150 (MQ=255) gcgAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTgc < 2:1161791/150‑1 (MQ=255) gcgAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTCGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTgc < 2:1299550/150‑1 (MQ=255) gCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACTCCTCTGGCGGCGGTGATGGCACGTGTCGAGCTGGGCTTGCGCTc > 2:804200/1‑150 (MQ=255) gCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCt < 1:679619/138‑1 (MQ=255) gCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCt > 2:679619/1‑138 (MQ=255) tGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCgg < 1:1209839/150‑1 (MQ=255) ggCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGGGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGcc < 2:98817/150‑1 (MQ=255) cccGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGa < 1:1281932/150‑1 (MQ=255) ccGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAg > 1:413886/1‑150 (MQ=255) cGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGc < 2:1654743/150‑1 (MQ=255) gcgcCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTgc > 2:1458598/1‑129 (MQ=255) gcgcCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTgc < 1:1458598/129‑1 (MQ=255) gcCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTgg > 2:1063375/1‑150 (MQ=255) ccTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCtt > 1:407827/1‑124 (MQ=255) ccTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCtt < 2:407827/124‑1 (MQ=255) ccTTGAACCACTTTACCGAGCGCTTGCGAGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGCACGCCGCTGGCGGCGTTGCAGGCATGTGTCGATCTAGGCTTGCGCTCGGCCGAGCCGCAGGAGTggc > 2:908395/1‑150 (MQ=255) cTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGGACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTggcg > 2:1310757/1‑150 (MQ=255) cTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTggcg > 2:413473/1‑150 (MQ=255) cTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTggcg > 1:905870/1‑150 (MQ=255) cTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCCAGCGGCGttc < 2:428841/100‑2 (MQ=255) cTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCCAGCGGCGttc > 1:428841/1‑99 (MQ=255) ttGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCg < 2:360068/129‑1 (MQ=255) ttGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCg > 1:360068/1‑129 (MQ=255) ccACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGAc > 1:1352069/1‑150 (MQ=255) cACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGAcc > 2:166686/1‑150 (MQ=255) aCTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGACCGCCGCTGGCGGCGGTGAAGGCACGTGTCGAGCTGGGCTTGCGCCCGGCCGAGCCGCAGGAGCGGCGGCAGACCt > 2:717733/1‑150 (MQ=255) cTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTc > 1:1779485/1‑120 (MQ=255) cTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTc < 2:1779485/120‑1 (MQ=255) cTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCtt < 2:714233/150‑1 (MQ=255) tttACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTg < 1:1001516/150‑1 (MQ=255) tttACCGAGCGCTTGCGCGGCCAGTCCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGGCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTg < 2:326960/150‑1 (MQ=255) ccGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGt > 2:1488459/1‑150 (MQ=255) cGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTc > 1:15140/1‑150 (MQ=255) gAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCg < 2:608990/150‑1 (MQ=255) aGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTg > 1:855504/1‑143 (MQ=255) aGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTg < 2:855504/143‑1 (MQ=255) aGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCgg < 1:166686/150‑1 (MQ=255) gcgcTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGc < 2:15140/150‑1 (MQ=255) cTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGa > 1:889159/1‑134 (MQ=255) cTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGa < 2:889159/134‑1 (MQ=255) cTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGc > 2:1417819/1‑150 (MQ=255) ttGCGCGGCCAGTTCTAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGcc < 2:1352069/150‑1 (MQ=255) tGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGTCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGccc < 1:1297931/150‑1 (MQ=255) ggCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGaa > 2:1388807/1‑74 (MQ=255) ggCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGaa < 1:1388807/74‑1 (MQ=255) gAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAgg > 1:1529905/1‑150 (MQ=255) gcgcCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCTGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGAAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCt > 1:1408649/1‑150 (MQ=255) gcgcCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCt > 1:1328939/1‑150 (MQ=255) aGGCGCAGTTCATTTCCAGCGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCCGGAGAGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGAccc > 2:1148389/1‑150 (MQ=255) gcgcAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCAc > 1:1839913/1‑150 (MQ=255) tGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCa < 1:1488459/150‑1 (MQ=255) tGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCa < 1:1201936/150‑1 (MQ=255) gCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACCGGCTGACCCACCTGGCCAACCAg > 2:303088/1‑150 (MQ=255) ccGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGGGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGc > 2:1479510/1‑150 (MQ=255) gCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTcc > 1:1289900/1‑150 (MQ=255) gCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTcc < 1:413473/150‑1 (MQ=255) ccACGAACTGCGAACGCCGCTGGTGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTCCCt > 2:1938957/1‑150 (MQ=255) cACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTCCCTg > 1:293268/1‑150 (MQ=255) aCGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCATGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTCCCTgg < 1:377457/150‑1 (MQ=255) aaCTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTCCCTGgcgc < 1:1600135/150‑1 (MQ=255) cTGCGAACGCCGCTGGCGGCGTTGAAGCCCCGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCTGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCCCCCGTTGTCCCTGGCGCgg > 1:1299144/1‑150 (MQ=255) tGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGc < 2:289383/111‑1 (MQ=255) tGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGc > 1:289383/1‑111 (MQ=255) ttcaaCGCCGCCAGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCAc > 2:1470750/4‑102 (MQ=255) ttcaaCGCCGCCAGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCAc < 1:1470750/99‑1 (MQ=255) ttcaaCGCCGCCAGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTCCCTGGCGCGGGt > 2:10199/4‑150 (MQ=255) cGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGAAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTCCCTGGCGCGGGTc < 2:1408649/150‑1 (MQ=255) gAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTCCCTGGCGCGGGTCg > 2:1604456/1‑150 (MQ=255) aaCGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTCCCTGGCGCGGGTCga > 2:363390/1‑150 (MQ=255) aCGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTCCCTGGCGCGGGTCgag < 1:363390/150‑1 (MQ=255) cgcTGGCGGCGTTTAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTCCCTGGCGCGGGTCGAGAATg < 2:106317/150‑1 (MQ=255) cgcTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTCCCTGGCGCGGGTCGAGAATg > 1:669657/1‑150 (MQ=255) | CTTGCGAGCGTTGCCGGTGGTGCAGGTGCAGCGCGAGCTGGGCCCGCTGGTGCGCGCCTTGAACCACTTTACCGAGCGCTTGCGCGGCCAGTTCGAGCGCCAGGCGCAGTTCATTGCCGACGCGGCCCACGAACTGCGAACGCCGCTGGCGGCGTTGAAGGCACGTGTCGAGCTGGGCTTGCGCTCGGCCGAGCCGCAGGAGTGGCGGCAGACCTTGGAGTCGGCAGCCCAGGGCACCGACAGGCTGACCCACCTGGCCAACCAGCTGTTGTCCCTGGCGCGGGTCGAGAATG > NC_002947/1621773‑1622065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |