| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,667,944 | A→G | 5.4% | S302G (AGC→GGC) | ffh → | signal recognition particle GTPase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,667,944 | 0 | A | G | 5.4% | 324.8 / 3.3 | 108 | S302G (AGC→GGC) | ffh | signal recognition particle GTPase subunit |
| Reads supporting (aligned to +/- strand): ref base A (48/54); new base G (4/2); total (52/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
GTGATGCCCGAGGCGGTGCTGCGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGAT > NC_002947/1667795‑1668092 | gTGATGCCCGAGGCGGTGCTGCGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCa > 2:584008/1‑150 (MQ=255) gATGCCCGAGGCGGTGCTGCGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGc < 1:1603402/150‑1 (MQ=255) gATGCCCGAGGAGGTGCTGCGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGc < 1:1201309/150‑1 (MQ=255) gCCCGAGGCGGTGCTGCGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTg > 2:293309/1‑150 (MQ=255) ccGAGGCGGTGCTGCGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGAt > 2:1897635/1‑150 (MQ=255) ggCGGTGCTGCGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAg < 1:721386/150‑1 (MQ=255) ggTGCTGCGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAg > 2:691591/1‑150 (MQ=255) tgcGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGa < 2:1579356/150‑1 (MQ=255) gcgcTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTAGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCTAg < 2:1042624/150‑1 (MQ=255) cggcTGTCGGTACGTGCAATCCCCGGCAAAACAATAAAGTTCAACGGTATGGGTGAGACGACCGAGGACCTCGA‑TCCGTTCCAACTTGTCCTCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCGGCCTGCTCGATCAGGCTGAg < 2:1859463/148‑1 (MQ=255) cTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGAGTGGGCGACGTGCTCGGCCTGCTCGATCAGGCTGAGCAg > 1:1859463/1‑150 (MQ=255) tGTCGGTACGTGCAATCACCGGCAAACCGATCAATTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGa < 1:1003536/150‑1 (MQ=255) tGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGa < 2:90420/150‑1 (MQ=255) gTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGAc > 2:1591082/1‑150 (MQ=255) aCGTGCAATCACCGGCAAACCAATCAAGTTTATCGGTATGGGCGAGAAGACCGAGGCCTTCGATGTCGCT‑GACTCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGa < 1:1491606/150‑1 (MQ=255) gCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑caag > 1:880159/1‑150 (MQ=255) aaTCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑caaggc > 1:369881/1‑150 (MQ=255) tCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTGCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGGTCGAACAGGCCGAGCAGACCATCGA‑aagggcca > 2:127753/1‑150 (MQ=255) aCCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑caaggccaag < 2:321997/150‑1 (MQ=255) aCCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTAGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑caaggccaag > 2:401662/1‑150 (MQ=255) aaaCCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGC‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGAc > 1:686718/1‑150 (MQ=255) aCCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGa < 1:639611/107‑1 (MQ=255) aCCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGa > 2:639611/1‑107 (MQ=255) cGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTAGCGCATCCTCGGCATGGGCGCCGTCCCAACCATGATCCTGCTTCCCTAGGAAACCATAGA‑CAACGCCCAGGCCGACAAGc > 2:610633/1‑150 (MQ=255) gATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCt > 2:337658/1‑150 (MQ=255) aTCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTg < 1:1002189/150‑1 (MQ=255) gTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCaa < 2:1102633/150‑1 (MQ=255) ttCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAg > 2:1130171/1‑150 (MQ=255) aTCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGaaa > 1:1282697/1‑150 (MQ=255) ggTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCg < 2:164522/130‑1 (MQ=255) ggTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCg > 1:164522/1‑130 (MQ=255) gTATGGGTGAGAAGCAAGAGGGACTAGC‑GCAGTTCCACCGCGACCGCGTGGCTACTCGCATCCTCGACATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGACCGACAAGCTGGCCAAGAAACTga > 2:20425/1‑150 (MQ=255) gggTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGc < 2:1070325/82‑1 (MQ=255) gggTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGc > 1:1070325/1‑82 (MQ=255) ggTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCAACACGAAGAAGAGCCATGGATTATTCTCGGCATGGGCGGCGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGaagaag > 1:338152/1‑150 (MQ=255) gTGAGAAGGCCGAGGCCCTTTA‑GCCGTTCCACCCCGTCCGCGTCGCTTCTCTCATCCTCGGCATGGGCGTCGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCTAAGGCCGATAAGTTTGCCAAGAAACTGAAGaagg < 2:1365167/150‑1 (MQ=255) aagaCCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGcc < 1:1009267/90‑1 (MQ=255) aagaCCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGcc > 2:1009267/1‑90 (MQ=255) aagaCCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGaagggcaag < 2:369881/150‑1 (MQ=255) cGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCGTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCtt < 1:584008/150‑1 (MQ=255) ggCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTg < 2:1157753/118‑1 (MQ=255) ggCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTg > 1:1157753/1‑118 (MQ=255) cccTCGA‑GCCGTTCCCCCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGAcc < 2:12242/150‑1 (MQ=255) cccTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAGCGGCTTCGAcc > 1:1364752/1‑150 (MQ=255) cTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTc > 2:1284086/1‑150 (MQ=255) cTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTc > 2:255502/1‑150 (MQ=255) cTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTc > 2:1130192/1‑150 (MQ=255) cTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTc > 2:824166/1‑150 (MQ=255) tCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCGCGGCATAGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCg > 2:72956/1‑150 (MQ=255) gA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCGGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGaa > 1:1598795/1‑150 (MQ=255) gA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGaggtcgaa > 2:849273/1‑143 (MQ=255) gCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGa < 1:825054/150‑1 (MQ=255) cGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGAGGTCGAAgccc < 1:849273/150‑4 (MQ=255) cGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACt > 1:495237/1‑150 (MQ=255) tCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTcc < 2:773820/150‑1 (MQ=255) cACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCcgc < 2:495237/150‑1 (MQ=255) aCCCCGACCGCGTCGCTTCGCGCCTCCTCGGCATGGGCGACGTGCTCAGCCTTATCGAGCAGGCCGAGCAGAGCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTAAAGAAGGGCAAAGGCTACGACCTCGAAGACTTCcgcg > 2:286659/1‑150 (MQ=255) aCCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCcgcg > 2:5939/1‑150 (MQ=255) cccGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATc > 1:1304632/1‑54 (MQ=255) cccGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATc < 2:1304632/54‑1 (MQ=255) cccGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGAc < 2:1305652/150‑1 (MQ=255) aCCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAACGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGc < 2:960252/150‑1 (MQ=255) ccGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAg < 2:602328/100‑1 (MQ=255) cgTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTgca < 1:691591/150‑1 (MQ=255) gTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTgcag > 1:1249335/1‑150 (MQ=255) gTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTgcag < 2:1282697/150‑1 (MQ=255) tCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTgcagc < 1:293309/150‑1 (MQ=255) cGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTgcagca > 2:1427613/1‑150 (MQ=255) gCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCaa > 1:297105/1‑150 (MQ=255) cTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCaaa > 2:616152/1‑150 (MQ=255) cTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCaaa < 1:255502/150‑1 (MQ=255) ttCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCcgc < 1:294930/133‑1 (MQ=255) ttCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCcgc > 2:294930/1‑133 (MQ=255) tCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATg < 1:1897635/150‑1 (MQ=255) tCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATg < 2:1249335/150‑1 (MQ=255) gcgcATCCTCGGCATGGGCGACGTGCTTAGCCTGATCGTGCATGCCGAGCAGACCATCGACCATGGACCTGG‑TGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATgaa < 1:337658/150‑1 (MQ=255) gcgcATCATCGGTTGAGGCGACGGGCGCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATgaa < 2:110812/150‑1 (MQ=255) gcATCCTCGGCATGGGCGACGTGCTCAGCCTGATCTAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATgaaga < 1:9770/150‑1 (MQ=255) ccTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGC‑CAGGTCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACAt < 1:20425/150‑1 (MQ=255) cTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATg < 1:1130192/150‑1 (MQ=255) cTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATg < 1:1250657/150‑1 (MQ=255) tCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGaagggca > 1:1752990/1‑96 (MQ=255) tCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGaagggca < 2:1752990/96‑1 (MQ=255) tCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATgg > 2:678460/1‑150 (MQ=255) gCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCTAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAAc > 2:1314832/1‑143 (MQ=255) gCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCTAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAAc < 1:1314832/143‑1 (MQ=255) gCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCAGCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGggcg < 2:147582/150‑1 (MQ=255) aTGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGggcggc > 1:1856793/1‑150 (MQ=255) gggAGACGTGCTCAGACTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCt < 1:276614/150‑1 (MQ=255) gCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCt > 1:841247/1‑100 (MQ=255) gCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCt < 2:841247/100‑1 (MQ=255) cGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATgaa < 2:914167/132‑1 (MQ=255) cGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATgaa > 1:914167/1‑132 (MQ=255) gTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCggcggc < 1:616152/150‑1 (MQ=255) tGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGcc > 2:797908/1‑150 (MQ=255) cTCGGCCTGCTCGATCAGGCTGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTg > 2:575890/1‑150 (MQ=255) cAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGAt < 2:880159/150‑1 (MQ=255) cAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGAt < 1:401662/150‑1 (MQ=255) cAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGAt < 1:797908/150‑1 (MQ=255) cAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGAt < 1:1130171/150‑1 (MQ=255) | GTGATGCCCGAGGCGGTGCTGCGCTGTCGGTACGTGCAATCACCGGCAAACCGATCAAGTTCATCGGTATGGGTGAGAAGACCGAGGCCCTCGA‑GCCGTTCCACCCCGACCGCGTCGCTTCGCGCATCCTCGGCATGGGCGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACCATCGA‑CAAGGCCAAGGCCGACAAGCTGGCCAAGAAACTGAAGAAGGGCAAGGGCTTCGACCTCGAAGACTTCCGCGACCAGCTGCAGCAAATGAAGAACATGGGCGGCCTCGGCGGCCTGAT > NC_002947/1667795‑1668092 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |