| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,859,504 | A→T | 6.2% | intergenic (‑54/+102) | PP_1662 ← / ← PP_1663 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,859,504 | 0 | A | T | 6.2% | 255.3 / 6.9 | 81 | intergenic (‑54/+102) | PP_1662/PP_1663 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (38/38); new base T (2/3); total (40/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.43e-01 | |||||||||||
CCTTCGTGGGACATTCTCGATTCGTCGCGTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAG > NC_002947/1859356‑1859650 | ccTTCGTGGGACATTCTCGATTCGTCGCGTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACaa < 2:156425/150‑1 (MQ=255) ttCGTAGGAGATTCTCGAGTCGTCGCGTTCGGTTACTTTGACAATCAGCGCACACCTCCCCTACTCCACGCTGTTTGCGACAATGTATCGCACGTCTGCTGTATAGATTTTGGTAGCAGACTAAATAAGTAAAACAGGCATGAAACAAGt < 2:219546/150‑1 (MQ=255) gTGGGACATTCTCGATTCGTCGCGTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTc > 2:249441/1‑150 (MQ=255) ggACATTCTCGATTCGTCGCGTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATg < 2:1167642/150‑1 (MQ=255) gACATTCTCGATTCGTCGCGTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGtt < 1:1438140/144‑1 (MQ=255) gACATTCTCGATTCGTCGCGTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGtt > 2:1438140/1‑144 (MQ=255) aCATTCTCGATTCGTCGCGTTCGGTTACTTGGACAGTCATCGGCACCCTCCACTTCTTCAAGATGTCTGCGAAAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGaa < 1:130749/150‑1 (MQ=255) ctcGATTCGTCGCGTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACTTGTTTCATgcctgttt < 2:1839282/150‑8 (MQ=255) gATTCGTCGCGTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTTTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAg < 2:671501/150‑1 (MQ=255) aTTCGTCGCGTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAgg < 1:249441/150‑1 (MQ=255) tcgtcgCGTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGa < 1:55521/150‑1 (MQ=255) gtcgCGTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGAtg > 2:1793585/1‑150 (MQ=255) cgTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGAtgctgc < 1:1266792/150‑1 (MQ=255) cgTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGAtgctgc < 1:786768/150‑1 (MQ=255) ggTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCtgg > 2:402135/1‑149 (MQ=255) ggTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATAAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCtgg < 1:402135/149‑1 (MQ=255) gTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCtgggt < 2:372230/150‑1 (MQ=255) ttGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCt > 2:1896837/1‑150 (MQ=255) ttGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCGTTATAAAGTTTGTTAGCAGACTAAGTAAGTAAAACAAGCATGAAACAAGTTTCATGAAGCTCGAAGGCAGGCTGCCTGGGTGGGCt > 1:1554021/1‑150 (MQ=255) ggACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAAAACGCATTAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCttt < 1:1019639/150‑1 (MQ=255) aCAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGttt < 1:363166/112‑1 (MQ=255) aCAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGttt > 2:363166/1‑112 (MQ=255) gTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCgc > 2:650005/1‑150 (MQ=255) tCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACCGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGGCGGGGTGGGCTCTTTAgca > 1:998017/1‑150 (MQ=255) tCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCgca < 2:1306077/150‑1 (MQ=255) tCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCtgggtgg < 1:1829753/136‑1 (MQ=255) tCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCtgggtgg > 2:1829753/1‑136 (MQ=255) aaCTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGaaa > 2:1788528/1‑150 (MQ=255) aCTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGaaaa > 1:877074/1‑150 (MQ=255) cTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGAt > 2:862874/1‑115 (MQ=255) cTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGAt < 1:862874/115‑1 (MQ=255) cTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAg > 2:1169315/1‑150 (MQ=255) tCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACTTGTTTCATgc < 1:101545/101‑2 (MQ=255) tCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACTTGTTTCATgc > 2:101545/1‑100 (MQ=255) ccACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGcc < 1:1711493/150‑1 (MQ=255) cttcttCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCg > 1:1027891/1‑150 (MQ=255) cttcttCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCg < 2:877074/150‑1 (MQ=255) cttcAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCAc > 2:597262/1‑150 (MQ=255) ttcAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACt > 1:1942394/1‑150 (MQ=255) tcAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTg < 2:1027891/150‑1 (MQ=255) aaGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAg > 1:444884/1‑92 (MQ=255) aaGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAg < 2:444884/92‑1 (MQ=255) tGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCCCACTGGGCGGGGCtt > 2:1560267/1‑150 (MQ=255) gACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAg > 1:157164/1‑150 (MQ=255) gACAGTCTGTCGCAGGACTGATTTATCGAAGTTGTGAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAGAAGCCCCGCCCAGTGCGGGGCttttc < 2:419354/150‑4 (MQ=255) cAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCGCGCTGTGGGCGGGGCTTCAGGt > 2:931903/1‑150 (MQ=255) tgtCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTgc < 1:62728/150‑1 (MQ=255) gtCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTgca < 2:1942394/150‑1 (MQ=255) gtCGCACGGCTTCTGTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTgca < 1:273115/150‑1 (MQ=255) tCGCACGTCTTCTTTATAGAGTTTGTTAGCAGGCTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCttttt < 2:853867/103‑1 (MQ=255) tCGCACGTCTTCTTTATAGAGTTTGTTAGCAGGCTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCttttt > 1:853867/1‑103 (MQ=255) tCGCACGTCTTCTTGATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTgcag > 2:1044045/1‑150 (MQ=255) ttcttTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACACGCCAGGTGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTgcgc > 2:1441366/1‑150 (MQ=255) ttcttTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCtgg > 1:1711282/1‑83 (MQ=255) ttcttTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCtgg < 2:1711282/83‑1 (MQ=255) cttTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGa > 1:1687676/1‑150 (MQ=255) cttTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGa > 2:1029167/1‑150 (MQ=255) tttATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAGAAGCCCCGCCCAGTGCGGGGCttttctt < 1:205734/131‑6 (MQ=255) tttATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAGAAGCCCCGCCCAGTGCGGGGCttttctt > 2:205734/1‑126 (MQ=255) ataGAGTTTGTTAGCAGCCTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAg > 2:994577/1‑150 (MQ=255) agagTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGtt < 1:1896837/150‑1 (MQ=255) agTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGc < 1:1044045/150‑1 (MQ=255) agTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGc > 1:424043/1‑150 (MQ=255) gTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCtgggt < 2:1415458/70‑1 (MQ=255) gTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCtgggt > 1:1415458/1‑70 (MQ=255) ttAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCt < 2:295806/65‑1 (MQ=255) ttAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCt > 1:295806/1‑65 (MQ=255) agtaagtaAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCa > 1:634797/1‑150 (MQ=255) agtaaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGa > 2:159942/1‑150 (MQ=255) agtaaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGa < 1:597262/150‑1 (MQ=255) agtaaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGAGCTTCAGGTATTGCAGGCAGTCCGCGAACAGCTGCCCTTCACCGGCCTGCCATCGa < 2:998017/150‑1 (MQ=255) taaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCCCAGTGCGGGGCttttctt < 1:224009/101‑6 (MQ=38) taaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCCCAGTGCGGGGCttttctt > 2:224009/1‑96 (MQ=38) taaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGAcc < 2:157164/150‑1 (MQ=255) aaaCAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGt < 1:1793585/150‑1 (MQ=255) aaCAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTg < 2:1687676/150‑1 (MQ=255) cttcATGAAACTTGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGAt > 1:1645619/4‑114 (MQ=255) cttcATGAAACTTGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGAt < 2:1645619/111‑1 (MQ=255) gAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTgc > 1:845883/1‑150 (MQ=255) aaCAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTa > 1:885596/1‑88 (MQ=255) aaCAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTa < 2:885596/88‑1 (MQ=255) aaCAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTgcag > 2:1700689/1‑150 (MQ=255) | CCTTCGTGGGACATTCTCGATTCGTCGCGTTCGGTTACTTGGACAGTCATCGGTAAACTCCACTTCTTCAAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGTGGGCTTTTTCGCAGCAAAGAAAAGCCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAG > NC_002947/1859356‑1859650 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |