| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,863,282 | T→A | 6.3% | L309Q (CTG→CAG) | PP_1666 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,863,282 | 0 | T | A | 6.3% | 245.7 / 6.6 | 79 | L309Q (CTG→CAG) | PP_1666 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (37/37); new base A (2/3); total (39/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.43e-01 | |||||||||||
GTGCAAGTGCAGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGTTTTCGCTGGTAAGGAGCG > NC_002947/1863134‑1863430 | gTGCAAGTGCAGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTtggcctg < 1:1690476/150‑1 (MQ=255) tGCAGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGc < 2:1461876/150‑1 (MQ=255) aTGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGaa < 1:468218/150‑1 (MQ=255) aCCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGc < 2:1023988/141‑1 (MQ=255) aCCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGc > 1:1023988/1‑141 (MQ=255) cTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGcc > 1:1672207/1‑149 (MQ=255) tATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAg > 1:135472/1‑150 (MQ=255) tATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAg < 2:284989/150‑1 (MQ=255) tggcGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGACTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGc > 1:1936288/4‑150 (MQ=255) tGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTtggcctggc < 1:1176644/120‑1 (MQ=255) tGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTtggcctggc > 2:1176644/1‑120 (MQ=255) cGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCAcc > 1:1311371/1‑150 (MQ=255) aGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCCGGCACcgc < 1:710338/150‑2 (MQ=255) cTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACcggcg < 1:156924/150‑1 (MQ=255) gCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTg > 2:496566/1‑150 (MQ=255) ccGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCt > 1:880806/1‑114 (MQ=255) ccGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCt < 2:880806/114‑1 (MQ=255) ccGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGt > 1:159081/1‑147 (MQ=255) ccGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGt < 2:159081/147‑1 (MQ=255) cgcgTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCg < 1:379343/150‑1 (MQ=255) gcgTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGt < 1:334521/145‑1 (MQ=255) gcgTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGt > 2:334521/1‑145 (MQ=255) cgTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGc < 2:817099/150‑1 (MQ=255) gTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCCGGCACCGCCGGTGCCTGct < 2:1672207/150‑2 (MQ=255) gTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGcc > 1:1703989/1‑150 (MQ=255) ttGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGCACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGc > 2:136083/1‑150 (MQ=255) cccTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGc < 1:303521/121‑1 (MQ=255) cccTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGc > 2:303521/1‑121 (MQ=255) cTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTAcc > 2:1443803/1‑150 (MQ=255) tATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCAGGCCAAGCTggg > 1:1296649/1‑99 (MQ=255) tATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCAGGCCAAGCTggg < 2:1296649/101‑3 (MQ=255) gCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAg < 2:1703989/150‑1 (MQ=255) cccACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACATCTACGTGCCCAGCTTGGCCTGGCCaa < 1:52117/90‑1 (MQ=255) cccACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCaa > 2:52117/1‑90 (MQ=255) cccACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGt < 2:135472/150‑1 (MQ=255) ccACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTg > 1:421669/1‑150 (MQ=255) ccACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTg > 2:737659/1‑150 (MQ=255) aCGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGa > 1:490385/1‑150 (MQ=255) gCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGAcgccgc > 2:1411318/1‑150 (MQ=255) aGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCCCGTTTCGGTTTTTTCCGGGCGATCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAg > 1:924614/1‑150 (MQ=255) gcTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCg < 2:663401/90‑1 (MQ=255) gcTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCg > 1:663401/1‑90 (MQ=255) tGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCa > 1:1259728/1‑150 (MQ=255) ggCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGccc > 2:863358/1‑150 (MQ=255) cACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCcgc > 1:947339/1‑150 (MQ=255) aCTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCcgc > 1:831741/1‑140 (MQ=255) aCTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCcgc < 2:831741/140‑1 (MQ=255) aCTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCcgcg > 2:715730/1‑150 (MQ=255) aCCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCt > 1:1467006/1‑150 (MQ=255) ccTGACCTACGGGGTTACGGGGAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCACCAATTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTgc < 1:33764/150‑1 (MQ=255) ccTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCgg > 2:1582718/1‑101 (MQ=255) ccTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCgg < 1:1582718/101‑1 (MQ=255) ccTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTgc > 2:660848/1‑150 (MQ=255) ccTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTgc < 2:1311371/150‑1 (MQ=255) tACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGcagcca < 2:1936288/150‑1 (MQ=255) tACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCGGCAGGAAGTGCCGGTCGAGCAGGCACC‑‑‑‑‑‑GCCGG‑‑‑TG‑‑‑‑‑‑CCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTc < 2:66226/150‑1 (MQ=255) aCGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATCCCCGTCCCCGCAATGGACCCCCCACCCTCGCAGCCCGCGCCTGCGcagccag > 2:212250/1‑150 (MQ=255) tACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCaa < 1:715730/150‑1 (MQ=255) cAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGtt < 2:421669/150‑1 (MQ=255) aaTCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTc < 2:1491647/150‑1 (MQ=255) aaTCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTc < 1:863358/150‑1 (MQ=255) aaTCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTc < 1:496566/150‑1 (MQ=255) aaCAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCt > 1:1369314/1‑150 (MQ=255) aCAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCcgc > 1:1825027/1‑114 (MQ=255) aCAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCcgc < 2:1825027/114‑1 (MQ=255) aGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGc > 2:1691286/1‑150 (MQ=255) cTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCa > 1:1516131/1‑75 (MQ=255) cTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCa < 2:1516131/75‑1 (MQ=255) cGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGtttt > 1:748782/1‑150 (MQ=255) gTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTgggtgctg < 2:1601170/150‑8 (MQ=255) tGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGTTTTCg > 2:488470/1‑150 (MQ=255) cccAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGTTTTCGCt < 1:690572/150‑1 (MQ=255) gcAGCTTGGCCAGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGTTTTCGCTg < 1:1764741/149‑1 (MQ=255) ccAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGTTTTCGCTg < 2:1467006/150‑1 (MQ=255) cAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCt > 2:1816931/1‑136 (MQ=255) cAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCt > 2:1816362/1‑136 (MQ=255) cAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCt < 1:1816362/136‑1 (MQ=255) cAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCt < 1:1816931/136‑1 (MQ=255) cAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGTTTTCGCTgg < 1:1461345/150‑1 (MQ=255) aGCTTGGCCAGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCa > 1:1128054/1‑94 (MQ=255) aGCTTGGCCAGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCa < 2:1128054/94‑1 (MQ=255) ttGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGTTTTCGCTGGTAAg < 1:136083/150‑1 (MQ=255) ggcctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGTTTTCGCTGGTAAGGa < 2:490385/150‑1 (MQ=255) ggcctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGTTTTCGCTGGTAAGGa < 2:924614/150‑1 (MQ=255) gcctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGTTTTCGCTGGTAAGGAg > 2:358168/1‑150 (MQ=255) cctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGTTTTCGCTGGTAAGGAgc > 1:162743/1‑150 (MQ=255) ctggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGTTTTCGCTGGTAAGGAgcg > 1:605897/1‑150 (MQ=255) tggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGcagccag > 2:160121/1‑105 (MQ=255) tggccAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGcagccag < 1:160121/105‑1 (MQ=255) | GTGCAAGTGCAGGGCATGAACCTGCAGCGCTATGCCGAGCTGGCCCGCGTGCTTGAGCCCTATGGCCCACGCTTGCAGGCGGCTGAAGGCACTACCCTGACCTACGGGGTTACGGGCAATCGTGAACAGCTACGTGCCCAGCTTGGCCTGGCCAAGCTGCAGGAAGTGCCGGTCGAGCAGGCACCGGCGGTGCCGGCCATGCCAGTACCGGCAGTGGACGCCGCAGCCGCGCAGCCCGCGCCTGCGCAGCCAGCACCCAAGCCGTTCGACGGCTTGCGTTTTCGCTGGTAAGGAGCG > NC_002947/1863134‑1863430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |