| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,039,573 | C→A | 6.2% | intergenic (‑51/+71) | rffE ← / ← PP_1812 | UDP‑N‑acetylglucosamine‑2‑epimerase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,039,573 | 0 | C | A | 6.2% | 248.9 / 4.7 | 80 | intergenic (‑51/+71) | rffE/PP_1812 | UDP‑N‑acetylglucosamine‑2‑epimerase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (41/34); new base A (2/3); total (43/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.21e-01 | |||||||||||
TTCGAAGCGGCTGTCCTGCGCCAGTTGCAGGGCTAGCGGGGCCATCTTGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGG > NC_002947/2039427‑2039721 | ttCGAAGCGGCTGTCCTGCGCCAGTTGCAGGGCTAGCGGGGCCATCTTGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCaaa > 1:909933/1‑150 (MQ=255) tCGAAGCGGCTGTCCTGCGCCAGTTGCAGGGCTAGCGGGGCCATCTTGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCaaaa < 2:1412537/150‑1 (MQ=255) gCGGCTGTCCTGCGCCAGTTGCAGGGCTAGCGGGGCCATCTTGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCt < 2:1854901/149‑1 (MQ=255) gCGGCTGTCCTGCGCCAGTTGCAGGGCTAGCGGGGCCATCTTGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCt > 1:1854901/1‑149 (MQ=255) gCGGCTGTCCTGCGCCAGTTGCAGGGCTAGCGGGGCCATCTTGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTa < 1:1181183/150‑1 (MQ=255) gCGGCTGTCCTGCGCCAGTTGCAGGGCTAGCGGGGCCATCTTGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTa < 1:1422557/150‑1 (MQ=255) gTTGCAGGGCTAGCGGGGCCATCTTGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCg > 2:1440027/1‑150 (MQ=255) aGGGCTAGCGGGGCCATCTTGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCa > 1:1080644/1‑150 (MQ=255) aGGGCTAGCGGGGCCATCTTGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCa > 1:585038/1‑150 (MQ=255) aGCGGGGCCATCTTGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAAGGGCGTGCCAGTTTGt < 2:1928242/150‑1 (MQ=255) aTCTTGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCATGGCAGGTTGGTgggggggg > 2:603420/1‑148 (MQ=255) tGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCtt < 2:885397/150‑1 (MQ=255) gATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTGGGGGGGAGGCTTa > 2:968208/1‑150 (MQ=255) aTGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTAc > 2:1727995/1‑150 (MQ=255) gCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAg < 2:536897/105‑1 (MQ=255) gCTTCTGGGAGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAg > 1:536897/1‑105 (MQ=255) ttCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACt > 2:1139689/1‑150 (MQ=255) tCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTg < 1:423111/150‑1 (MQ=255) tGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTggg < 2:301338/150‑1 (MQ=255) ggagggTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGAAGGAAAAAAAAGAAAAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTggggg < 2:1764174/147‑1 (MQ=255) ggCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCg > 2:379560/1‑104 (MQ=255) ggCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCg < 1:379560/104‑1 (MQ=255) ggTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAggg < 2:1326908/150‑1 (MQ=255) ggTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAggg < 2:1326900/150‑1 (MQ=255) tACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCg > 1:1607341/1‑150 (MQ=255) tACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCg > 2:1099929/1‑150 (MQ=255) aCCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCgg < 1:968208/150‑1 (MQ=255) gAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGc < 2:71310/103‑1 (MQ=255) gAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGc > 1:71310/1‑103 (MQ=255) gAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAgg > 1:448502/1‑125 (MQ=255) gAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAgg < 2:448502/125‑1 (MQ=255) gAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTgggg > 2:1059807/1‑139 (MQ=255) gAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTgggg < 1:1059807/139‑1 (MQ=255) gAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGttt > 2:1937252/1‑150 (MQ=255) aaCAGTCAGGGTTTTGAGGGGCACGGCAGTGATCCACGGGCGCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTAcc < 2:459716/150‑1 (MQ=255) aGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACcggg > 1:1223820/1‑150 (MQ=255) cAGGTTTTTGAGGTGCACCGCATTCATCCTCTTGCTCTGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACcgggcgg < 2:1080644/150‑1 (MQ=255) gggTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACcgggcgg < 1:726342/148‑1 (MQ=255) gggTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACcgggcgg > 2:726342/1‑148 (MQ=255) tCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCtt < 2:585038/150‑1 (MQ=255) tGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGtt > 2:912988/1‑150 (MQ=255) gAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTc > 2:1613469/1‑150 (MQ=255) ggCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGGCAGTTTGTCGGGGGGAGGCTTGCCGACTGGGGGGGGGCGGTTTACCGGGCGGGCGTTGTTcggcg > 1:765132/1‑150 (MQ=255) ggCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTcgccg < 1:1937252/150‑1 (MQ=255) gCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTAAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTcggcgg > 2:147296/1‑150 (MQ=255) gCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTAAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTcggcgg > 2:146741/1‑150 (MQ=255) aCGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCggcgggc > 2:1122122/1‑150 (MQ=255) ggCAGTGATCCTCTTGCTCGGGTCCTTCAGGCCGGCCGGCTTCTATTCGACAAAGATCCAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGAGt > 1:298429/1‑150 (MQ=255) aGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGACTTGTTCGGCGGGCGTTGt > 2:1280629/1‑150 (MQ=255) gTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTa < 2:1223820/150‑1 (MQ=255) gTGATCCTCGTGCTCGGGTCCTTGAAGACGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTAACTACTGGGGGAGGGCGGTTTACCGGGCGTGCCTTGTTCGGCAGGCGTTGTa < 2:79971/150‑1 (MQ=255) aTCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGga < 1:1139689/150‑1 (MQ=255) tCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGgag > 2:1834890/1‑141 (MQ=255) tCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGgag < 1:1834890/141‑1 (MQ=255) gggTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGc > 1:1515403/1‑150 (MQ=255) ggTCCTTGAAGCAGGCCGGTTTCCATTGCTAAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCa < 1:147296/150‑1 (MQ=255) ggTCCTTGAAGCAGGCCGGTTTCCATTGCTAAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCa < 1:146741/150‑1 (MQ=255) cTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAgtgg > 2:28765/1‑150 (MQ=255) aaGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTggg > 1:451926/1‑150 (MQ=255) aGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGc > 1:1638336/1‑150 (MQ=255) gCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCa > 1:1880120/1‑150 (MQ=255) agccacgTTTCCATTGCTCCAATATCTCGCAGGGGCGCAATGGCGTCCCAGTTTGTCGGGGGGAAGCTGACCGACTTGCGGAGGGCGGTTTACCTGGCGGGCCTTGTTCGGCGGGCGTTGCAGGAGAATGGCCGGGCAGTGGTGGGCAGt < 2:765132/144‑1 (MQ=255) ggCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGtt < 2:779680/107‑1 (MQ=255) ggCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGtt > 1:779680/1‑107 (MQ=255) ggCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACGGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTg < 1:1440027/150‑1 (MQ=255) gCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGTGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGGGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTgg < 2:1792290/150‑1 (MQ=255) gCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGcc > 2:293179/1‑101 (MQ=255) gCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGcc < 1:293179/101‑1 (MQ=255) gTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCAATTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTAt > 1:1900505/1‑150 (MQ=255) aTTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACa > 1:829111/1‑150 (MQ=255) aTTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGAGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACa > 1:787406/1‑150 (MQ=255) cTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTg > 2:356650/1‑104 (MQ=255) cTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTg < 1:356650/104‑1 (MQ=255) tCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGCGAATGGACGGGCGGTGGTGAGGCCCGGGGACCGGACAAActg > 2:1869647/1‑148 (MQ=255) tCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAAt < 2:16767/112‑1 (MQ=255) tCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAAt > 1:16767/1‑112 (MQ=255) tCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACgg > 2:440654/1‑150 (MQ=255) tCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACgg > 1:311430/1‑150 (MQ=255) tCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACgg < 1:440654/150‑1 (MQ=255) tCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACGGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGNATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACgg < 1:1099929/150‑1 (MQ=255) | TTCGAAGCGGCTGTCCTGCGCCAGTTGCAGGGCTAGCGGGGCCATCTTGATGGCTTCTGGGCGGGTACCGAAAACAGTCAGGGTCTTGAGGGGCACGGCAGTGATCCTCTTGCTCGGGTCCTTGAAGCAGGCCGGTTTCCATTGCTCAAAAATCTAGCAGGCGGGCAATGGCGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGG > NC_002947/2039427‑2039721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |