| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,039,746 | A→C | 7.5% | P33P (CCT→CCG) ‡ | PP_1812 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,039,746 | 0 | A | C | 7.5% | 222.8 / 10.7 | 80 | P33P (CCT→CCG) ‡ | PP_1812 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (38/36); new base C (4/2); total (42/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.72e-01 | |||||||||||
CGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAGGGTTGGT > NC_002947/2039598‑2039894 | cGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAg < 1:1727995/150‑1 (MQ=255) tttgcAGTTTGTCGGGGGGAGGTTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAgg < 1:1249808/146‑1 (MQ=255) gTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAgg < 2:1880120/150‑1 (MQ=255) gTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAgg > 1:1705729/1‑150 (MQ=255) ccAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGcc > 2:530099/1‑150 (MQ=255) tttGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTtgt < 2:1515403/150‑1 (MQ=255) tttGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTCGACACTGGGTATCGGACAATGGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTtgt < 1:530099/150‑1 (MQ=255) tGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGc < 1:1613469/150‑1 (MQ=255) ttACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAgggccgggc > 2:1279199/1‑150 (MQ=255) aCCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGggccgggccg > 2:1690468/1‑150 (MQ=255) cTGGGGGAGGGCGGTTTCCCGGGCGGGCCTTGTTCGGCGGGCGTTGGAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCgg < 1:603420/150‑1 (MQ=255) tGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCggg > 2:841358/1‑150 (MQ=255) ggggAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGc < 1:1279199/150‑1 (MQ=255) tcGGTTTACCTGGCGGGCCTTTTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACg < 2:787406/149‑1 (MQ=255) cGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACgg < 2:829111/150‑1 (MQ=255) ggcgggcCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTtg < 2:1900505/150‑1 (MQ=255) gggcCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTgtgg < 1:1280629/150‑1 (MQ=255) gggcCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTgtgg > 1:839425/1‑150 (MQ=255) ccTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTgtgggtg > 1:1436803/1‑150 (MQ=255) cTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGc > 1:1871554/1‑94 (MQ=255) cTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGc < 2:1871554/94‑1 (MQ=255) cTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGACCGGGGCGGAAACGGCCACGGTTTgtgggtgg < 1:841358/150‑1 (MQ=255) ttCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACACGCACAAGGCCCTGGCCTTGTGcctgt < 1:1478507/101‑5 (MQ=38) ttCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACACGCACAAGGCCCTGGCCTTGTGcctgt > 2:1478507/1‑97 (MQ=38) tCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGaa < 2:311430/150‑1 (MQ=255) gggcgTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTGCAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCTGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGa > 2:1397686/1‑150 (MQ=255) gggcgTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGa < 2:1705729/150‑1 (MQ=255) gTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGt > 2:1757108/1‑150 (MQ=255) tAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAgggccgg < 2:815747/95‑1 (MQ=255) tAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAgggccgg > 1:815747/1‑95 (MQ=255) agaATGGCCGGGCAGTGGTGGGCAGTTGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGa < 2:451926/150‑1 (MQ=255) aTGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCtt < 2:400718/72‑1 (MQ=255) aTGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCtt > 1:400718/1‑72 (MQ=255) tGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAgggccgg < 2:254490/87‑1 (MQ=255) tGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAgggccgg > 1:254490/1‑87 (MQ=255) gCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGAtt > 1:1453884/1‑150 (MQ=255) gCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCGTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGAtt < 1:28765/150‑1 (MQ=255) ggCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGt < 2:839425/150‑1 (MQ=255) aGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGttt > 2:309122/1‑131 (MQ=255) aGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGttt < 1:309122/131‑1 (MQ=255) gtggtgGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAAAGGAAACGGTTTGTTGGTGGGGGAAGTTGAGCGTTTTGCTGACCGATTCGGTAAcc > 1:1098745/1‑150 (MQ=255) tggtggGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCa > 2:721391/1‑150 (MQ=255) gtggGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAg > 1:1776610/1‑117 (MQ=255) gtggGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAg < 2:1776610/117‑1 (MQ=255) tATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGt > 2:1472006/1‑150 (MQ=255) aaTCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGAGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGt > 1:1451389/2‑150 (MQ=255) tCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTg > 2:818274/1‑150 (MQ=255) tCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTg < 1:818274/150‑1 (MQ=255) ggACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTggg > 1:1136712/1‑150 (MQ=255) gACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGt > 2:1418197/1‑150 (MQ=255) cGGGGCTTTGGCTACCGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCCGGCGGAGCGGGGCGGAAACGGCAACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATtgtg < 2:611817/150‑1 (MQ=255) gggATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCg > 1:683969/1‑150 (MQ=255) ggATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCgg > 2:1336599/1‑150 (MQ=255) tttGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCGTTCGCCGGGGTAGTTGGGTATTGTGCGGCCa > 1:1632131/1‑150 (MQ=255) tttGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGccg < 2:1451389/150‑2 (MQ=255) ttGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAg > 1:1747233/1‑150 (MQ=255) gCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGtt < 1:1906113/86‑1 (MQ=255) gCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGtt > 2:1906113/1‑86 (MQ=255) ccttaacgCACAAGGCCCTGGCCTTGTGCCTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGtt > 2:1644814/8‑150 (MQ=255) cctgaacgCACAAGGCCCTGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGtt > 1:878157/8‑150 (MQ=255) cTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGGATTTTGCGGCCAGGTTa > 1:663949/1‑150 (MQ=255) tACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGTGGAAACGGCCa < 2:652775/62‑1 (MQ=255) tACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGTGGAAACGGCCa > 1:652775/1‑62 (MQ=255) aCAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTAcc < 1:1122122/150‑1 (MQ=255) cAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGCTCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTAccc > 2:761271/1‑150 (MQ=255) acgCACAAGGCCCTGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCg < 2:927936/135‑1 (MQ=255) acgCACAAGGCCCTGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCg > 1:927936/3‑137 (MQ=255) aGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTgg < 2:1358058/127‑1 (MQ=255) aGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTgg > 1:1358058/1‑127 (MQ=255) aGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCg > 2:685189/1‑150 (MQ=255) cacaAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTa < 1:685189/150‑1 (MQ=255) aacaAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGCGAAATTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTa < 1:1397686/149‑1 (MQ=255) acaAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAg < 1:721391/150‑1 (MQ=255) caAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTa < 2:489960/125‑1 (MQ=255) caAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTa > 1:489960/1‑125 (MQ=255) aaGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAggg > 2:1734908/1‑150 (MQ=255) aGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAGggt > 2:800829/1‑150 (MQ=255) cAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGAtt < 2:1265624/90‑1 (MQ=255) cAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGAtt > 1:1265624/1‑90 (MQ=255) cAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACAATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAGggttggt > 1:451315/1‑150 (MQ=255) aGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAg > 2:1424160/1‑72 (MQ=255) aGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAg < 1:1424160/72‑1 (MQ=255) | CGTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAGGGTTGGT > NC_002947/2039598‑2039894 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |