| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,092,470 | T→A | 6.6% | intergenic (+73/+18) | deaD → / ← ygiD | ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,092,470 | 0 | T | A | 6.6% | 214.6 / 7.2 | 76 | intergenic (+73/+18) | deaD/ygiD | ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase |
| Reads supporting (aligned to +/- strand): ref base T (34/36); new base A (3/2); total (38/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.80e-01 | |||||||||||
AAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGTTACGCA > NC_002947/2092323‑2092618 | aaGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGc < 2:1465736/150‑1 (MQ=255) tCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCtt > 2:1255718/1‑139 (MQ=255) tCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCtt < 1:1255718/139‑1 (MQ=255) tCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAaga < 2:1224751/150‑1 (MQ=255) ccAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAagag < 2:1572680/150‑1 (MQ=255) cAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAgg > 2:891003/1‑150 (MQ=255) cAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAgg > 1:1405780/1‑150 (MQ=255) cAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCAAGCCCGCGaaag > 1:1118077/1‑146 (MQ=255) cAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCAAGCCCGCGaaag < 2:1118077/148‑3 (MQ=255) aaGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGc < 2:1405780/150‑1 (MQ=255) tCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCtt > 2:683401/1‑150 (MQ=255) tCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCtt < 1:683401/150‑1 (MQ=255) cAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTc < 2:315226/150‑1 (MQ=255) ggACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGt < 2:625810/150‑1 (MQ=255) gACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTc > 1:1768478/1‑150 (MQ=255) acTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGaa < 1:1662677/150‑1 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTg < 2:313017/123‑1 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTg > 1:313017/1‑123 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGccc < 2:349224/126‑1 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGccc > 1:349224/1‑126 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAAcc > 1:1029163/1‑150 (MQ=255) gcgTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAg < 1:1241712/141‑1 (MQ=255) gcgTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAg > 2:1241712/1‑141 (MQ=255) gcgTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGa > 2:924983/1‑150 (MQ=255) gTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATa < 1:62028/150‑1 (MQ=255) gctggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGAt > 2:160452/1‑150 (MQ=255) tggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGt < 1:1784094/150‑1 (MQ=255) gcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTcc > 1:1597179/1‑150 (MQ=255) aaGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCAt > 1:1883414/1‑150 (MQ=255) gcagcTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATcc > 2:1658639/1‑150 (MQ=255) gcTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCa > 1:549953/1‑150 (MQ=255) cTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTAGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAg > 2:136739/1‑150 (MQ=255) cTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCGTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTAGCGGGCTGGCCCGCGAAGAGGCCCTTCAGGCGAACCGATAGATGTCCATCCCCAg > 2:136671/1‑150 (MQ=255) aaGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAgcgc > 2:1349203/1‑150 (MQ=255) aaGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAgcgc < 2:549953/150‑1 (MQ=255) aaGCTGCGTCGCTACCGCGAGGATTGATACTGCCGCCAGGACAAAGAGCACCCGGTGCTG‑CAGGGG‑TTTGTAGGACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAgcgc > 1:529253/1‑150 (MQ=255) cTGCGTCGCTACTGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACTGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGcc > 2:1818936/1‑150 (MQ=255) cTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGcc < 1:1349203/150‑1 (MQ=255) gTCGCGACCGCGAGGATTGATCCTGGCGTCACCG‑AGACCTACCCGGTTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAgg < 2:1773158/150‑1 (MQ=255) tCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAggg < 2:1883414/150‑1 (MQ=255) tCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAggg > 2:120546/1‑150 (MQ=255) cGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGt < 1:1426614/150‑1 (MQ=255) gCTACCGCGAGGATTGATCCTGGCGGAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACGGGCCCT‑TTCGCGGGATTGCCCGCGCAGAGGCCCCGCAGTTGAATCGCAAGATGTCCATCACCAGCGCGCCCGGGGTa > 1:25322/1‑150 (MQ=255) aCCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAAc < 2:529253/150‑1 (MQ=255) aCCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAAc < 2:1276937/150‑1 (MQ=255) ggATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCCGTATTGTTTTT‑GTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGAt < 1:924983/150‑1 (MQ=255) gATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAggg > 2:322530/1‑137 (MQ=255) gATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAggg < 1:322530/137‑1 (MQ=255) gATCCTGGAGTAACGA‑AAAAACCCCCGGCTTAGGTTGGGGATTTTTTTTTACCTGTTCCGGCCCT‑TTCGCGGGCTTGCCCCCGAAGAGGCCCTTCAGTCGAACCGATAGACGTCCATCCCCAGCGCGTCCAGCGTAAAACTCTGATGcac < 2:677082/150‑1 (MQ=255) gTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTCTTCGCGGGCAAGCCCGCGaaa > 1:374361/1‑76 (MQ=25) gTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTCTTCGCGGGCAAGCCCGCGaaa < 2:374361/77‑2 (MQ=25) gA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGcc > 2:1690712/1‑149 (MQ=255) a‑aaaaaTCCCCGGCTTAGGTGGGGGG‑TTTTTTTTACCTGTCCCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTc < 2:370261/150‑1 (MQ=255) a‑aaaaaTCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACTGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTc < 1:1818936/150‑1 (MQ=255) aaaTCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCg > 2:887756/1‑150 (MQ=255) aaaTCCCCGGCTTAGGTCGGGGA‑‑TTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCgg < 2:1899506/150‑1 (MQ=255) aTCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGc < 1:410631/150‑1 (MQ=255) ccGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCa > 1:899523/1‑150 (MQ=255) cGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAACAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCaa > 1:1746241/1‑150 (MQ=255) cGGCTTAGGTCGGATA‑TTTTTTTTACCGGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCTTTGGGTTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCaa < 1:120546/150‑1 (MQ=38) ttAGGTCGGGGA‑TTTTTTTTACTTGTATTGGCCCT‑TTCGCGGGCTTGCCCGCTAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGc > 2:358897/1‑150 (MQ=255) ttAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGc < 1:1841542/150‑1 (MQ=255) aGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCaa < 2:1597179/150‑1 (MQ=255) ggTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCaaa < 1:160452/150‑1 (MQ=255) agccGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCaaa < 2:652032/147‑1 (MQ=255) a‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGa > 2:1157591/1‑104 (MQ=255) a‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGa < 1:1157591/104‑1 (MQ=255) ccTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATg > 1:68841/1‑150 (MQ=255) ccTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATg < 1:891003/150‑1 (MQ=255) ggcctcttCGCGGGCAAGCCCGCGAAAGGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCAc > 2:164109/7‑150 (MQ=255) gCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACt > 1:524342/1‑150 (MQ=255) gCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGAGTGAACCCCTGATGCAACACCCCCAAGTTGCTGGCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGGTCATCACt > 1:436130/1‑150 (MQ=255) cT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCAAGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTggg > 1:746405/1‑150 (MQ=255) cgcgGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATgg < 2:1029163/150‑1 (MQ=255) gcgGGCTTGCCCGCGAAGAGGAACTTCAGTCGACACGATAGATATCCATCCCCAGTGCGCCTATGGGTAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGt > 2:1191110/1‑150 (MQ=255) cgGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGtt < 1:1658639/150‑1 (MQ=255) ggCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGTTAc > 1:12401/1‑150 (MQ=255) cTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGTTACGc > 1:1842132/1‑150 (MQ=255) ttGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGTTACGCa > 1:331374/1‑150 (MQ=255) | AAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGA‑AAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCT‑TTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGTTACGCA > NC_002947/2092323‑2092618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |