| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,100,099 | C→A | 6.7% | intergenic (‑167/‑38) | PP_1875 ← / → PP_1876 | two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,100,099 | 0 | C | A | 6.7% | 380.7 / 11.2 | 120 | intergenic (‑167/‑38) | PP_1875/PP_1876 | two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (53/59); new base A (3/5); total (56/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.93e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
GCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTGGCC > NC_002947/2099951‑2100247 | gctgGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGTCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGgcgcgcc > 1:610517/1‑149 (MQ=255) gtggGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCgg < 2:1606334/150‑1 (MQ=255) gggTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGTTACAGCTTAGCCCCAGGCTGAACGCAAGCACTGTGGGAGCGGGCAAGCCCGC‑GGAAGGGCGCGCAGCGGcc > 1:1040488/1‑150 (MQ=255) gtctgtctGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGcccc < 1:635751/150‑1 (MQ=255) tctgtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑aaaa > 1:1138443/1‑150 (MQ=255) tctgtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑aaaa < 2:1138443/150‑1 (MQ=255) tctgtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCACACCCGTTCCCACAGGCACGGCTTAGCCCCAGGCTGAACGCAAGCCCTGCGGGAGCGGGCAAGCCCGC‑GGGGGGGCGCGCAGCGGCCCCC‑aaaa > 1:1467659/1‑150 (MQ=255) tgtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCACC‑aaaaaa < 2:1195647/150‑1 (MQ=255) ttCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACt > 1:864300/1‑150 (MQ=255) cATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGc < 2:1772168/133‑1 (MQ=255) cATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGc > 1:1772168/1‑133 (MQ=255) cATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTga < 2:385802/150‑1 (MQ=255) cATTCCAGTCGGTCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTga < 2:1109095/150‑1 (MQ=255) aTTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCAGCAGGCGGAACGCAAGCCCTGTGAGAGCGGGCAAACCCGC‑GGTGGGGCGCGCGGCGGCCCCC‑AAAAAACTgag > 1:619376/1‑150 (MQ=255) ttCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGAt > 1:1824062/1‑150 (MQ=255) cgTTGCTCGCCAAGCGGGGGCCGCTTGGCCCCCCTCCGGGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGt < 1:1372358/149‑1 (MQ=255) aGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGt < 2:1784284/150‑1 (MQ=255) aGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGt > 2:906751/1‑150 (MQ=255) ttGATCGCCAAGGGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTa < 2:1467659/150‑1 (MQ=255) tCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAg > 2:105299/1‑150 (MQ=255) cAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAgtcgt > 1:1546172/1‑150 (MQ=255) aGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCa < 2:868134/150‑1 (MQ=255) aGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGCACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCa < 1:1050621/150‑1 (MQ=255) ggggCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGa > 2:618365/1‑150 (MQ=255) ggggCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGa < 1:105299/150‑1 (MQ=255) gggCCCCTGGGCGCCCCTCCGCGGGTTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGGGCGGGAAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGAc < 2:1417210/150‑1 (MQ=255) ggCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGCTACAGCTTAGCCCCAGGCTGAACGCAAGCACTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGAcg > 1:1660965/1‑150 (MQ=255) gCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑aaaa > 2:810441/1‑119 (MQ=255) gCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑aaaa < 1:810441/119‑1 (MQ=255) ccGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTa < 1:788667/132‑1 (MQ=255) ccGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTa > 2:788667/1‑132 (MQ=255) cGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCCAAAAAAACTGGGATTGTTAGGAGTCGTCATGGAcgct > 1:1427611/1‑150 (MQ=255) gcCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATc > 1:615319/1‑150 (MQ=255) cTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCCAAGCGGCCCCC‑Gcttggcgatcaactgaaatgaacagacagacccaccagcagccggggc < 2:541393‑M2/150‑49 (MQ=255) tCCGCGGGCTTGCCCGTTCCCACAGCTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCttt > 2:1487843/1‑150 (MQ=255) gcgTGCTTGCCCGTTCCCACAGGTACAGCTTACCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCt < 1:301058/150‑1 (MQ=255) gcgGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑Acttggcgatcaactgaaatgaacagacagacccaccagcagccggggctatt > 1:1578895‑M2/1‑98 (MQ=255) cgGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTg < 2:864300/150‑1 (MQ=255) cgGGCTTGCCCGTTCCCACAGGTACAGCGTAGCCCCAGGCTGAACGCAAGCACTGTGGGA‑CAGACGTGTGCTCTTGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTg < 1:1790667/150‑1 (MQ=255) gCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCtt > 2:669737/1‑134 (MQ=255) gCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCtt < 1:669737/134‑1 (MQ=255) tGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCCAAGCGGCCCCC‑Gcttggcgatcaactgaaatgaacagacagacccaccagcagccggggctattcggctat > 1:541393‑M2/1‑91 (MQ=255) gCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACcgcg > 1:1764909/1‑150 (MQ=255) cgggtcccaCAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑Acttggcgatcaactgaaatgaacagacagacccaccagcagccggggctattcg > 1:1051064‑M2/5‑88 (MQ=255) ccGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑Acttggcgatcaactgaaatgaacagacagacccaccagcagccggggctattcg < 2:1051064‑M2/142‑55 (MQ=255) ccGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑Aaaaaactgaaatgaacagacagacccaccagcagccggggctattcggctatgcttgcgcag < 1:348960‑M2/150‑63 (MQ=255) ccGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGAcgctcgc > 1:1758768/1‑126 (MQ=255) ccGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGAcgctcgc > 1:1786068/1‑126 (MQ=255) ccGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGc < 2:959143/134‑1 (MQ=255) ccGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGc > 1:959143/1‑134 (MQ=255) ccGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCCAAGCGGCCCCC‑Gcttggcgatcaactgaaatgaacagacagacccaccagcagccggggctattcggctatgct < 2:1723994‑M2/150‑63 (MQ=255) ccGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCCAAGCGGCCCCC‑Gcttggcgatcaactgaaatgaacagacagacccacca < 1:131323‑M2/125‑38 (MQ=255) ccGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCCAAGCGGCCCCC‑Gcttggcgatcaactgaaatgaacagacagacccacca > 2:131323‑M2/1‑88 (MQ=255) gTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCCAAGCGGCCCCC‑Gcttggcgatcaactgaaatgaacagacaga < 1:1632925‑M2/116‑31 (MQ=255) gTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCCAAGCGGCCCCC‑Gcttggcgatcaactgaaatgaacagacaga > 2:1632925‑M2/1‑86 (MQ=255) tCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAAt < 2:1764909/150‑1 (MQ=255) ccACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGAc > 2:595750/1‑114 (MQ=255) ccACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGAc < 1:595750/114‑1 (MQ=255) ccACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCg < 1:971313/150‑1 (MQ=255) ccACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCg > 2:1126390/1‑150 (MQ=255) ccACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCg < 1:1145031/150‑1 (MQ=255) aGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTAc < 1:1126390/150‑1 (MQ=255) gTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTga > 2:45146/1‑85 (MQ=255) gTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAg > 2:44268/1‑94 (MQ=255) gTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAg < 1:44268/94‑1 (MQ=255) tACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTgg < 1:1344678/150‑1 (MQ=255) aCAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGgc < 2:657010/150‑1 (MQ=255) cTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGgcgcgc < 2:1540669/150‑1 (MQ=255) cTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGgcgcgc > 1:1542901/1‑150 (MQ=255) ccAGGCGGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGGGCCGAATCGGTACTGGCGCGCCTTGAAc < 1:1809378/150‑1 (MQ=255) aGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAccc < 1:1244385/150‑1 (MQ=255) gCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATgg < 2:1162887/89‑1 (MQ=255) gCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCt < 1:1894982/150‑1 (MQ=255) gAACGCACGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCCCGCAGCGGCCCAA‑CACTACCTATGTCGGCGAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGtt < 1:442144/150‑1 (MQ=255) gAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGtt < 2:1824062/150‑1 (MQ=255) aaCGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTg > 1:716513/1‑150 (MQ=255) aCGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCGTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGc > 2:840628/1‑150 (MQ=255) cGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑Aaaaaactgaaatgaacagacagacccaccagcagccggggctattcggctatgcttgcgcagcgcaaggaacgggaaaccggctcgggactcatgga > 2:348960‑M2/1‑53 (MQ=255) cGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGcc < 2:1542901/150‑1 (MQ=255) gCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATc > 2:1105348/1‑96 (MQ=255) gCAAGCCCTGTGGGAGCGGGCAAGCACGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATc < 1:1105348/96‑1 (MQ=255) cccTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCttt < 2:1780024/96‑1 (MQ=255) cccTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGcaca > 2:760302/1‑150 (MQ=255) cccTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGcaca > 1:845004/1‑150 (MQ=255) ccTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGa < 2:1407372/66‑1 (MQ=255) ccTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGa > 1:1407372/1‑66 (MQ=255) cTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAAc > 2:1521376/1‑150 (MQ=255) gCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTAGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCTCCTTGAACCACTGTTGCCGGCATCACACCCGcac > 1:401094/1‑150 (MQ=255) ggCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGcc < 1:299555/131‑1 (MQ=255) ggCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGcc > 2:299555/1‑131 (MQ=255) aGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACt < 1:1487843/150‑1 (MQ=255) gCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTg > 2:5894/1‑150 (MQ=255) ccGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTggg < 2:1660965/150‑1 (MQ=255) cgc‑gGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTgggg > 1:1941210/1‑150 (MQ=255) ggAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGcac < 2:1546172/150‑1 (MQ=255) aGGGGCGCCAAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATAGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGcacca < 2:126023/150‑1 (MQ=255) gcgcAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTgg < 2:615319/150‑1 (MQ=255) cgcAGCGGCCCCC‑Acttggcgatcaactgaaatgaacagacagacccaccagcagccggggctattcggctatgcttgcgcagcgcaaggaacgggaaaccggctcgggactcatggatatcaagttcaccaatcgcctgtcatacaagc > 2:1849543‑M2/1‑14 (MQ=255) cgcAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTGGc > 2:1796101/1‑150 (MQ=255) gcAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTATGGACCGCGCCGAATCGGTACTAGCGCGCCTTGAAACCGTGTTGCCGCCACACCGCCCGCACATCAACTGGGACCCCCCACTGGcc > 2:545349/1‑150 (MQ=255) | GCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGC‑GGAGGGGCGCGCAGCGGCCCCC‑AAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTGGCC > NC_002947/2099951‑2100247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |