| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,577,392 | T→C | 5.4% | Q349R (CAG→CGG) | PP_2259 ← | sigma‑54 dependent transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,577,392 | 0 | T | C | 5.4% | 223.0 / 2.2 | 74 | Q349R (CAG→CGG) | PP_2259 | sigma‑54 dependent transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (33/37); new base C (2/2); total (35/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.06e-01 | |||||||||||
GAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTTGTATCAAGGCTTTTTCCAGGCGCGGCTCGGCACTGCCG > NC_002947/2577246‑2577541 | gAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGCCCAGCGGCTGc‑c < 2:998506/150‑1 (MQ=255) aCAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGATGGGCGAAGGCGAACGAGCCTAGATCATAGCCTATCAGGTCCGACTCCACCAGTCCGGCCGGGATCGCGGCACAGTTTACGGCGACCAGCGGCTGC‑CTgg > 1:1691061/1‑150 (MQ=255) gCCGTGGGCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCTGCGGTGGACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGgct < 2:58446/150‑1 (MQ=255) cGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTgc > 1:1340743‑M2/1‑148 (MQ=255) tGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTgctg < 2:1899078‑M2/150‑5 (MQ=255) cTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTg < 2:944283/150‑1 (MQ=255) ttGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGc < 1:148202/150‑1 (MQ=255) gCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAg < 2:135769/150‑1 (MQ=255) gCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAg < 2:1629459/150‑1 (MQ=255) aGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCAGCCGCGCCAG‑GCAGCCgctggtcgccgtaaactgtgcg > 2:1369729‑M2/1‑128 (MQ=255) tCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTcgac > 2:1805245/1‑150 (MQ=255) ccccGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑ATGGCGAGGCTGCTGGCCCGGTGCAGGGCGTcgac < 1:1371453/149‑1 (MQ=255) ccGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCgg < 1:1758703/122‑1 (MQ=255) ccGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCgg > 2:1758703/1‑122 (MQ=255) ggTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAaca > 2:1213370/1‑150 (MQ=255) tGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCTACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACActt < 1:1820947/150‑1 (MQ=255) gCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACActtc < 1:498959/150‑1 (MQ=255) cccTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAgg > 2:882111/1‑132 (MQ=255) cccTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAgg < 1:882111/132‑1 (MQ=255) ccTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACActtctt < 2:844604/150‑1 (MQ=255) ccTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACActtctt > 1:837733/1‑150 (MQ=255) cTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAac < 2:1363350/142‑1 (MQ=255) cTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAac > 1:1363350/1‑142 (MQ=255) cTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCttt < 2:1524938/150‑1 (MQ=255) cTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCttt < 1:1899078/150‑1 (MQ=255) ttGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTg < 2:1217070/150‑1 (MQ=255) gtggtgGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGTTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGcc < 1:1569099/150‑1 (MQ=255) gcgcCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCt < 2:1915899/150‑1 (MQ=255) ggTGATCGCGCCTTTGTCATAGGCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCTGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTCCGCCTGTTTc < 2:1691061/150‑1 (MQ=255) aaCGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCAGCCGCGCCAG‑GCAGCCgctggtcgccgtaaact < 2:1680863‑M2/112‑18 (MQ=255) cgcCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCttt < 2:1542653/127‑1 (MQ=255) cgcCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCttt > 1:1542653/1‑127 (MQ=255) cTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCa > 2:280750/1‑150 (MQ=255) tttGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCaa > 2:386643/1‑150 (MQ=255) tAGCCGAACAGTTCCGACACCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCggg > 1:1031611/1‑150 (MQ=255) ccGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATg < 1:1805245/150‑1 (MQ=255) gAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGGCAAGTTCTTCGACCACGCTTGTTTTGCCCGCGACCAACACCGGGATGTc < 1:1213370/150‑1 (MQ=255) gAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTc > 1:1730363/1‑150 (MQ=255) aaaCAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTc < 2:1935371/149‑1 (MQ=255) aCAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACAAAACCCgggtgtagcg > 2:1107337/1‑143 (MQ=255) aCAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTAGACGAAGACTTCTTTGCCTCACCCAGTCTCGCCCTCGACCAACACCGGGATGTCCt > 2:990290/1‑150 (MQ=255) ttCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCCGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTc > 1:24668/1‑150 (MQ=255) ttCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCCGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTc < 2:24668/150‑1 (MQ=255) tCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTcc < 1:280750/150‑1 (MQ=255) cGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCaa > 2:1065982/1‑150 (MQ=255) gACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAAt < 1:1065982/150‑1 (MQ=255) aCTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGaa > 2:932835/1‑91 (MQ=255) aCTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGaa < 1:932835/91‑1 (MQ=255) tCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGc > 1:1566442/1‑150 (MQ=255) accaGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAgg > 1:1281560/1‑150 (MQ=255) accaGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAgg > 1:980755/1‑150 (MQ=255) aGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTACAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGCGATGTCCTTTTACAATAGCAGAccc > 2:109621/1‑149 (MQ=255) cGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCtt < 1:151058/150‑1 (MQ=255) cGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCg > 1:1283676/1‑100 (MQ=255) cGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCg < 2:1283676/100‑1 (MQ=255) cGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTTGTAt < 2:1256673/150‑1 (MQ=255) aTCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGGAGGCCGGGATGTAGCagg > 1:583533/1‑148 (MQ=255) ccgcACAGTTTACGGCGACCAGCGTCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTTGTATCAAGGCtt > 2:1089766/1‑150 (MQ=255) cgcACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCCCGGCCAACGCCGAGTTGTCCTTTTGCAATAGCAGGCCGGCTTGTATCAAGCCttt > 1:1099834/1‑150 (MQ=255) cacaGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTTGTATCAAGGCttttt > 2:1127114/1‑150 (MQ=255) aGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTgctggtcgccgtaaactgtgcggcgatcccggccgaactggtggagtcggaactgttcggctatgacaaaggcgcgtt < 1:1680863‑M2/112‑79 (MQ=255) tttACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCtttt > 2:344714/1‑112 (MQ=255) tttACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCtttt > 1:1166336/1‑112 (MQ=255) tttACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCtttt < 1:344714/112‑1 (MQ=255) tttACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCtttt < 2:1166336/112‑1 (MQ=255) tttACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGc < 1:431630/128‑1 (MQ=255) tttACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGc > 2:431630/1‑128 (MQ=255) ggCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGACGTCGACGAACACTCCTTTGCCTACGCCTGTTTCGACCTCGACCAACACGGGGATGTCCTTTTCCAATAGCAGGCAGGCTTGTATCACGGCTTTTTCCAGGAGCgg > 2:97067/1‑150 (MQ=255) gACCAGCGGCTGC‑CTGGCGCGGCTggtcgccgtaaactgtgcggcgatcccggccgaactggtggagtcggaactgttcggctatgacaaaggcgcgttcaccggcgcccaccacaagggcaacccgggactgatccgcaaggccgacca < 1:1639050‑M2/150‑127 (MQ=255) gACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCCGACTGCCGCCCGCGAATAGCAGGCCGGCTTGTATCAAGGCTTTTTCCAGGCGCGGCTc < 1:1107337/150‑1 (MQ=255) cAGCGGCTGC‑CTGGCGCGGCTgctggtcgccgtaaactgtgcggcgatcccggccgaactggtggagtcggaactgttcggctatgacaaaggcgcgttcaccggcgcccaccacaagggcaacccgggactgatccgcaa > 1:1479971‑M2/1‑21 (MQ=255) cAGCGGCTGC‑CTGGCGCGGCTgctggtcgccgtaaactgtgcggcgatcccggccgaactggtggagtcggaactgttcggctatgacaaaggcgcgttcaccggcgcccaccacaagggcaacccgggactgatccgcaa < 2:1479971‑M2/141‑121 (MQ=255) cAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTTGTATCAAGGCTTTATACAGGTGCgggacggg > 2:1379297/1‑144 (MQ=255) cAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGCGAGTCGACGAACGCTTCTTTGCCTACGCCTGTTTCGCCCTCGAGCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTCGTAGCAAGGCTTTTTCCAAGCTCggaagagc > 1:646835/1‑144 (MQ=255) tGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTTGTATCAAGGCTTTTTCCAGGCGCGGCTCGGCACTGCCg > 1:1059993/1‑150 (MQ=255) | GAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTTGTATCAAGGCTTTTTCCAGGCGCGGCTCGGCACTGCCG > NC_002947/2577246‑2577541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |