| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,714,292 | G→T | 5.3% | G285G (GGC→GGA) | metH ← | cobalamin‑dependent methionine synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,714,292 | 0 | G | T | 5.3% | 284.3 / 2.3 | 87 | G285G (GGC→GGA) | metH | cobalamin‑dependent methionine synthase |
| Reads supporting (aligned to +/- strand): ref base G (37/45); new base T (3/2); total (40/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGCGCGGCTTGTACTTGGCCACGGCTTCGGCAATGGCCTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGCTTGGCGTGACGCACCGAGT > NC_002947/2714143‑2714440 | tcGCGCGGCTTGTACTTGGCCACGGCTTCGGCAATGGCCTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCg > 1:1297751/1‑150 (MQ=255) cgcgcgGCTTGTACTTGGCGACGGATTCGGTAGTGGCGAGGTTGTTGTAGGGGTTGGTGCCTTATCAGCCGCCAATGATGTGGAGGAAGCCGCTGGCCGCGAATTCAACACACCCCGCCGCCACCTCGGCCGGTGTGTCGTCGTACTCGc < 2:426085/150‑1 (MQ=255) ggCTTGTACTTGGCCACGGCTTCGGCAATGGCCTGGATGTGCCCCGGCTTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAg < 1:1882823/150‑1 (MQ=255) ttGTACTTGGCCACGGCTGCGGCAATGGCCTGGATGTGCCCCGGCGGGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCg > 1:1357622/1‑150 (MQ=255) tACTTGGCCACGGCTTCGGCAATGGCCTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTc < 2:894854/150‑1 (MQ=255) ttGGCCACGGCTTCGGCAATGGCCTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGc > 2:839457/1‑150 (MQ=255) ttGGCCACGGCTTCGGCAATGGCCTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGc > 1:867117/1‑150 (MQ=255) ggCCACGGCTTCGGCAATGGCCTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAg < 2:1145446/150‑1 (MQ=255) ttCGGCAATGGCCTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGACCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGtt > 2:1270663/1‑150 (MQ=255) ggCAAGGGCCGGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTggg < 2:804590/150‑1 (MQ=255) gCAATGGCCTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTgggg > 2:529142/1‑150 (MQ=255) cAATGGCCTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGt < 2:60255/150‑1 (MQ=255) gCCTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCg < 1:1160636/150‑1 (MQ=255) gCCTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCg > 2:1912812/1‑150 (MQ=255) gCCTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCg > 1:1598114/1‑150 (MQ=255) ccTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCgg > 2:608110/1‑150 (MQ=255) gATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGagac < 2:965848/150‑1 (MQ=255) gATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGacac > 1:143795/1‑150 (MQ=255) tgCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTgg < 2:1598114/150‑1 (MQ=255) ccccGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGc > 1:1566397/1‑126 (MQ=255) ccccGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGc < 2:1566397/126‑1 (MQ=255) ccccGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTgg > 1:1542397/1‑148 (MQ=255) ccccGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTgg < 2:1542397/148‑1 (MQ=255) ccccGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGt < 1:881021/150‑1 (MQ=255) ccccGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGt > 1:1756019/1‑150 (MQ=255) ccGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTAt > 1:1724373/1‑150 (MQ=255) ggCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCg < 1:1377456/150‑1 (MQ=255) ggCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCg > 2:1671502/1‑150 (MQ=255) ggCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCg < 1:1912812/150‑1 (MQ=255) gCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCgg > 2:75826/1‑150 (MQ=255) gtgCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTtg < 1:123731/150‑1 (MQ=255) gtgCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTtg < 2:143795/150‑1 (MQ=255) gcagcaGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACAACCGCGGCCTTCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGc < 1:1405821/150‑1 (MQ=255) ggcagcCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCa < 2:464138/149‑1 (MQ=255) gccgccAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGctc > 1:256080/1‑150 (MQ=255) ccgccAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGctct > 2:1426224/1‑150 (MQ=255) cgccAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCTCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCtt > 2:1677735/1‑150 (MQ=255) cgccAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCtt > 2:1421995/1‑150 (MQ=255) cgccAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGACCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCtt < 1:1270663/150‑1 (MQ=255) ccAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTcc < 2:666444/150‑1 (MQ=255) tgatgTTGAGGAAGACGCTGGCCGCGAATTCTTCGACCACCGCGGCCGTCTCGGCCGGGGTTTCGTCGTACTCGCCGTAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGTTGGCCAGCTCTTCCAAAt > 2:756843/1‑150 (MQ=255) atgTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATAc < 2:1297751/150‑1 (MQ=255) gTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACgg < 2:256080/150‑1 (MQ=255) ttGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACggg < 1:753693/150‑1 (MQ=255) gAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTtg < 1:638761/124‑1 (MQ=255) gAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTtg > 2:638761/1‑124 (MQ=255) gAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCa < 2:1194277/137‑1 (MQ=255) gAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCa > 1:1194277/1‑137 (MQ=255) gAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAg > 2:2010/1‑150 (MQ=255) gCCGCTGGGCGCGAATTCTTCGACCACCGGGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTc < 2:300560/150‑1 (MQ=255) cTGGCCGCGCATTCTTCGACCACCCCGGCGATCTCGGCCGGAGTTTCGTCGTACTCGCCGAAGGCGTGCGGCAGGCCGGCGTTTGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTg < 1:300080/150‑1 (MQ=255) cTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTg < 2:227825/150‑1 (MQ=255) cTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTg < 1:644062/150‑1 (MQ=255) cTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTg < 1:1421995/150‑1 (MQ=255) tGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTgg < 1:75826/150‑1 (MQ=255) gcgAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCg > 2:1278627/1‑150 (MQ=255) gcgAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCg > 1:985947/1‑150 (MQ=255) ttcGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGgcgc < 2:1003384/127‑1 (MQ=255) ttcGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGgcgc > 1:1003384/1‑127 (MQ=255) ttcGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCa > 1:1573663/1‑150 (MQ=255) ttcGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCa > 1:920948/1‑150 (MQ=255) gACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTAt < 1:1704547/89‑1 (MQ=255) gACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTAt > 2:1704547/1‑89 (MQ=255) ccGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGc < 1:839457/150‑1 (MQ=255) ccGCGGCCATCTCGGCCGGGGTTTCGTCGTACTAGCCGATGGCGTTCTGCAGGCCGGCGTTGGGGTGGGCTGCCACGTCAGAATCCTTCTTCGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCATTTCAGGc > 1:1893150/1‑150 (MQ=255) ggCCATCTCGGCCGGGGTTTCGTCGTACTCTCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCAc > 1:497510/1‑150 (MQ=255) ggCCATCTCGGCCGGGGTTTCGTCGTACTCTCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCAc > 1:497529/1‑150 (MQ=255) ccATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACgg > 1:1760588/1‑150 (MQ=255) tcGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATc < 1:400947/150‑1 (MQ=255) ggggTTTCGTCGTACTCTCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGCTTg < 2:497510/150‑1 (MQ=255) ggggTTTCGTCGTACTCTCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGCTTg < 2:497529/150‑1 (MQ=255) ggggTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGCTTg < 2:1893150/150‑1 (MQ=255) gggTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCCGGCCCACGGAAATCGGCTTgg < 2:1573663/150‑1 (MQ=255) gggTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGAATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGAGGCAGGACCTTCGCGCCGAGGGCGCAGTTCATGCCCACGGGAATCGGCTTgg > 2:1420900/1‑150 (MQ=255) tttCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCCGCTCTTCCTAATTCTACGTCACTGCCTTGGCGCCGAGTGCGCAGTTCAGGCCCACGGAAATCGGCTTGGCGt < 1:529142/150‑1 (MQ=255) tttCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGAGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGCTTGGCGt < 1:608110/150‑1 (MQ=255) tcgtcgTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGCTTGGCGTGa < 2:867117/150‑1 (MQ=255) tcgtcgTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGCTTGGCGTGa < 2:985947/150‑1 (MQ=255) cgtcgtACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAg < 2:1678248/119‑1 (MQ=255) cgtcgtACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAg > 1:1678248/1‑119 (MQ=255) gtcgtACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGCGGGCGCAGTTCAGGCCCACCGAAATCGGCTTGGCGTGACg > 1:1687737/1‑150 (MQ=255) aCTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGCTTGGCGTGACGCACCg < 2:1222413/150‑1 (MQ=255) tCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGc > 2:308728/1‑132 (MQ=255) tCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGc < 1:308728/132‑1 (MQ=255) tCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGCTTGGCGTGACGCACCGAg > 2:1847186/1‑150 (MQ=255) tCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGCTTGGCGTGACGCACCGAg > 2:1463139/1‑150 (MQ=255) tCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCACACGGAAATCGGCTTGGCGTGACGCACCGAg > 1:838143/1‑150 (MQ=255) cGCCGAAGGCGTTCGGCAGGCCGGCGTTAGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGCTTGGCGTGACGCACCGAGt < 1:1426224/150‑1 (MQ=255) gCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGgcgc < 2:1740100/98‑1 (MQ=255) gCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGgcgc > 1:1740100/1‑98 (MQ=255) | TCGCGCGGCTTGTACTTGGCCACGGCTTCGGCAATGGCCTGGATGTGCCCCGGCGTGGTGCCGCAGCAGCCGCCAATGATGTTGAGGAAGCCGCTGGCCGCGAATTCTTCGACCACCGCGGCCATCTCGGCCGGGGTTTCGTCGTACTCGCCGAAGGCGTTCGGCAGGCCGGCGTTGGGGTGGGCGGACACGTGGGTATCGGCCTTGGTGGCCAGCTCTTCCAAATACGGGCGCAGGTCCTTGGCGCCGAGGGCGCAGTTCAGGCCCACGGAAATCGGCTTGGCGTGACGCACCGAGT > NC_002947/2714143‑2714440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |