BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,749,325	C→T	6.7%	H98Y (CAC→TAC) ‡	PP_2405 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,749,325	0	C	T	6.7%	301.1 / 8.9	106	H98Y (CAC→TAC) ‡	PP_2405	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (51/46); new base T (4/3); total (57/49)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.91e-01

Only 100 of 109 total aligned reads displayed.

CGCCGCCCCTGGATGCCCCGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGTTCTGGCCGGCGCATTACTTT  >  NC_002947/2749176‑2749471

cgccgcCCCTGGATGCCCCGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAAGGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGc                                                                                                                                                    <  2:1704560/150‑1 (MQ=255)

 gccgccCCTGGATGCCCCGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGca                                                                                                                                                   >  1:1063858/1‑150 (MQ=255)

     ccccTGGATGCCCCGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCAGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGCGGACAcc                                                                                                                                               >  1:623813/1‑150 (MQ=255)

      cccTGGATGCCCCGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACAccc                                                                                                                                              >  1:892062/1‑150 (MQ=255)

      cccTGGATGCCCCGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACAccc                                                                                                                                              >  2:256936/1‑150 (MQ=255)

       ccTGGATGCCCCGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACAcccc                                                                                                                                             <  2:237863/150‑1 (MQ=255)

        cTGGATGCCCCGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCt                                                                                                                                            >  1:1596804/1‑150 (MQ=255)

          ggATGCCCCGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGa                                                                                                                                          <  2:1713786/150‑1 (MQ=255)

           gATGCCCCGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGTGCACCCCtacc                                                                                                                                         <  1:1622118/150‑4 (MQ=255)

               ccccGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGAACACCCCTGAGTTCg                                                                                                                                     >  2:696849/1‑150 (MQ=255)

                cccGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATTATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGa                                                                                                                                    <  2:714695/150‑1 (MQ=255)

                cccGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGa                                                                                                                                          <  1:306464/144‑1 (MQ=255)

                cccGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGa                                                                                                                                          >  2:306464/1‑144 (MQ=255)

                cccGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGa                                                                                                                                    <  2:1063858/150‑1 (MQ=255)

                cccGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGa                                                                                                                                    >  2:515839/1‑150 (MQ=255)

                 ccGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGAc                                                                                                                                   >  1:1163439/1‑150 (MQ=255)

                 ccGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGACGTTTATGAATGATTTGGCGCGGCGCTATGCCGATTAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGAc                                                                                                                                   >  1:723428/1‑150 (MQ=255)

                      gCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCAGCATGTTAATGATTGGGCGCGGCGCTATGCCGATCAACGACTAGAGCATTTAGGGGTGCACACCCCTTAGTTCGACTACGa                                                                                                                              <  1:1125112/150‑1 (MQ=255)

                       cTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAg                                                                                                                             >  1:201440/1‑150 (MQ=255)

                        tCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGAc                                                                                                                                   >  1:1540805/1‑143 (MQ=255)

                        tCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGAc                                                                                                                                   <  2:1540805/143‑1 (MQ=255)

                          aaGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCat                                                                                                                          <  2:36697/150‑1 (MQ=255)

                           aGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCatg                                                                                                                         >  2:1792632/1‑150 (MQ=255)

                           aGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCatg                                                                                                                         >  1:624931/1‑150 (MQ=255)

                             ggCAAGGTGGTGCTGTTGGCCTTCTGGACCTGGGACTGCATCAACTGCGGGCGCAGCCTGCCGCACGTGGAGGGTTGGGCGCGGCGTTATGCCGATCAAGGGTCGGTGGTGGTAGGGGTGCGCACCCCTGAGTTCGACTACGAGCatgat                                                                                                                       <  2:623813/150‑1 (MQ=255)

                                  ggtggtGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTACGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGc                                                                                                                  >  2:1487051/1‑150 (MQ=255)

                                   gtggtgCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCg                                                                                                                 >  1:1778757/1‑150 (MQ=255)

                                    tggtgCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGa                                                                                                                <  1:585980/150‑1 (MQ=255)

                                     ggtgCTCGTGGACCTATAGACCTCGGACTGCATCAACTGCCGGCGCCGCCTGCCGCACGTGAATGATTGGGCGAGGCGCTATGCCGATCAAGGGCTGGTAGTGGTACGGGTGCACGCCCCTGAGTATGAATAGGAACATGATGTGGAGAc                                                                                                               <  2:1740993/150‑1 (MQ=255)

                                        gCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACttt                                                                                                            >  2:1522061/1‑150 (MQ=255)

                                          tggtggACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGc                                                                                                          >  2:311346/1‑150 (MQ=255)

                                           ggtggACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCg                                                                                                         <  1:1629777/150‑1 (MQ=255)

                                           ggtggACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCg                                                                                                         <  2:163900/150‑1 (MQ=255)

                                            gtggACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCgg                                                                                                        >  1:672290/1‑150 (MQ=255)

                                            gtggACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCgg                                                                                                        <  1:515839/150‑1 (MQ=255)

                                               gACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATTAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGAc                                                                                                     <  2:723428/150‑1 (MQ=255)

                                                   tCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAgg                                                                                                 <  2:1778757/150‑1 (MQ=255)

                                                       gACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGc                                                                                             >  1:789102/1‑150 (MQ=255)

                                                          cTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCg                                                                                                         <  2:1493932/135‑1 (MQ=255)

                                                          cTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCg                                                                                                         >  1:1493932/1‑135 (MQ=255)

                                                          cTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCg                                                                                          >  1:1039877/1‑150 (MQ=255)

                                                            gggACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACAccc                                                                                                                                              >  2:499278/1‑96 (MQ=255)

                                                               aCTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTgg                                                                                     >  1:677929/1‑150 (MQ=255)

                                                               aCTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGAGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTgg                                                                                     <  1:1100898/150‑1 (MQ=255)

                                                                  gCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTgggta                                                                                  >  1:131281/1‑150 (MQ=255)

                                                                      cAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTgggtatcgg                                                                              >  1:1092039/1‑150 (MQ=255)

                                                                       aaCTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTgggtatcggg                                                                             >  2:1315985/1‑150 (MQ=255)

                                                                        aCTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGa                                                                                                                >  1:1185563/1‑114 (MQ=255)

                                                                        aCTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGa                                                                                                                <  2:1185563/114‑1 (MQ=255)

                                                                         cTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTgggtatcgggta                                                                           >  1:827758/1‑150 (MQ=255)

                                                                            ccGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGAc                                                                                                                                   >  2:1034521/1‑91 (MQ=255)

                                                                            ccGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGAc                                                                                                                                   <  1:1034521/91‑1 (MQ=255)

                                                                              ggCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCgg                                                                      >  1:471409/1‑150 (MQ=255)

                                                                               gcgcAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCg                                                                                                         <  2:865753/114‑1 (MQ=255)

                                                                               gcgcAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCg                                                                                                         >  1:865753/1‑114 (MQ=255)

                                                                               gcgcAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGt                                                                     <  1:269877/150‑1 (MQ=255)

                                                                                     ccTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGt                                                               <  1:1286394/150‑1 (MQ=255)

                                                                                      cTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTa                                                              <  2:471409/150‑1 (MQ=255)

                                                                                      cTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTa                                                              >  2:391467/1‑150 (MQ=255)

                                                                                      cTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGAGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTa                                                              >  2:1401048/1‑150 (MQ=255)

                                                                                       tGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAg                                                             >  1:1794882/1‑150 (MQ=255)

                                                                                          cGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATa                                                          <  2:1039877/150‑1 (MQ=255)

                                                                                            gaTGTGAATGAGTGGGCGGGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAAt                                                        <  2:761762/149‑1 (MQ=255)

                                                                                            cATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAAt                                                        <  1:1315985/150‑1 (MQ=255)

                                                                                              tgtgAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCTCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGa                                                      <  2:1483452/150‑1 (MQ=255)

                                                                                              tgtgAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGa                                                      <  2:624931/150‑1 (MQ=255)

                                                                                                 gAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCacac                                                                                                                                                >  2:185040/1‑57 (MQ=255)

                                                                                                 gAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCacac                                                                                                                                                <  1:185040/57‑1 (MQ=255)

                                                                                                 gAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTa                                                   >  2:1084364/1‑150 (MQ=255)

                                                                                                 gAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTa                                                   >  2:1652259/1‑150 (MQ=255)

                                                                                                  aaTGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGa                                                                                                                                          >  2:1199340/1‑62 (MQ=255)

                                                                                                  aaTGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGa                                                                                                                                          <  1:1199340/62‑1 (MQ=255)

                                                                                                     gATTTGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACaa                                                                                                   <  1:1497349/98‑1 (MQ=255)

                                                                                                     gATTTGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACaa                                                                                                   >  2:1497349/1‑98 (MQ=255)

                                                                                                     gATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAg                                               <  2:827758/150‑1 (MQ=255)

                                                                                                      aTTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTAGAAgg                                              >  1:750899/1‑150 (MQ=255)

                                                                                                      aTTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAgg                                              >  1:601156/1‑150 (MQ=255)

                                                                                                          ggcgcggcgcTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGtgtg                                          <  2:1596804/150‑1 (MQ=255)

                                                                                                           gcgcggcgcTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTgg                                         <  2:201440/150‑1 (MQ=255)

                                                                                                           gcgcggcgcTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTgg                                         <  1:391467/150‑1 (MQ=255)

                                                                                                           gcgcggcgcTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTgg                                         >  1:60424/1‑150 (MQ=255)

                                                                                                                     aTGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTggg                               <  1:311346/150‑1 (MQ=255)

                                                                                                                      tGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTTGCGGTAGATAATGAATACAAGGTGTGGAATGCCTgggg                              >  1:849398/1‑150 (MQ=255)

                                                                                                                            tCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTgg                                         >  2:1538681/1‑133 (MQ=255)

                                                                                                                            tCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTgg                                         <  1:1538681/133‑1 (MQ=255)

                                                                                                                              aaGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGt                      <  2:677929/150‑1 (MQ=255)

                                                                                                                               aGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGtt                     <  1:1901092/150‑1 (MQ=255)

                                                                                                                                 ggCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGTTCt                   <  1:1522061/150‑1 (MQ=255)

                                                                                                                                  gCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGTTCTg                  >  2:1374871/1‑150 (MQ=255)

                                                                                                                                      gtggtggtAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGTTCTGGCCg              >  1:729726/1‑150 (MQ=255)

                                                                                                                                        ggtggtAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGTTCTGGCCGgc            <  2:789102/150‑1 (MQ=255)

                                                                                                                                         gtggtAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGTTCTGGCCGgcg           >  2:1715668/1‑150 (MQ=255)

                                                                                                                                         gtggtAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGTTCTGGCCGgcg           >  2:1580045/1‑150 (MQ=255)

                                                                                                                                           ctcaGGGGTGTGCACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTgg                                >  1:381895/4‑127 (MQ=255)

                                                                                                                                           ctcaGGGGTGTGCACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTgg                                <  2:381895/124‑1 (MQ=255)

                                                                                                                                           ctcaGGGGTGTGCACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGtt                     >  2:1548156/4‑138 (MQ=255)

                                                                                                                                           ctcaGGGGTGTGCACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGtt                     <  1:1548156/135‑1 (MQ=255)

                                                                                                                                           ctcaGGGGTGTGCACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGTTCTGGCCGGCGCa         >  1:1563616/4‑150 (MQ=255)

                                                                                                                                              atgggAGCACACACCTGAGTTCGACTGGGAGCATGATGGGGCGACTTTGCTGGACAAGGTAGCCCGGTTAGGGATCGGGTATCCGGTGGCGGTAGATAATGACTAAAAGGTGTGGAATGCCTGAGGCAGCCAGTTCTGGCCGGCGCATTa      >  2:564848/3‑150 (MQ=255)

                                                                                                                                                  gTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGTTCTGGCCGGCGCATTACttt  >  1:1638062/1‑150 (MQ=255)

CGCCGCCCCTGGATGCCCCGGGGCTCAAGGGCAAGGTGGTGCTGGTGGACTTCTGGACCTGGGACTGCATCAACTGCCGGCGCAGCCTGCCGCATGTGAATGATTGGGCGCGGCGCTATGCCGATCAAGGGCTGGTGGTGGTAGGGGTGCACACCCCTGAGTTCGACTACGAGCATGATGTGGCGACTTTGCGGGACAAGGTAGCCCGGTTGGGTATCGGGTATCCGGTGGCGGTAGATAATGACTACAAGGTGTGGAATGCCTGGGGCAACCAGTTCTGGCCGGCGCATTACTTT  >  NC_002947/2749176‑2749471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`