Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,863,818 C→T 6.3% H279Y (CAC→TAC)  gllR → HTH‑type transcriptional regulator GalR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,863,8180CT 6.3% 181.0 / 2.4 63H279Y (CAC→TAC) gllRHTH‑type transcriptional regulator GalR
Reads supporting (aligned to +/- strand):  ref base C (34/25);  new base T (2/2);  total (36/27)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.98e-01

AACCGAGCTGCGGGTAGGGGATGTGGATTTCGTCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGGTGGTGGAAAGCGCTGATCTGGCGGTTATCCG  >  NC_002947/2863676‑2863966
                                                                                                                                              |                                                                                                                                                    
aaCCGAGCTGCGGGTAGGGGATGTGGATTTCGTCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGAc                                                                                                                                               >  2:1436464/1‑150 (MQ=255)
  ccGAGCTGCGGGTAGGGGATGTGGATTTCGTCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGTAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGc                                                                                                                                             <  2:474918/150‑1 (MQ=255)
        tGCGGGTAGGGGATGTGGATTTCGTCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAgg                                                                                                                                       >  1:1640707/1‑150 (MQ=255)
          cGGGTAGGGGATGTGGATTTCGTCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGc                                                                                                                                     <  2:164495/150‑1 (MQ=255)
             gTAGGGGATGTGGATTTCGTCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTg                                                                                                                                  >  2:1137039/1‑150 (MQ=255)
                ggggATGTGGATTTCGTCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCAc                                                                                                                               >  1:957896/1‑150 (MQ=255)
                         gATTTCGTCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTTGACACTCACCTGACGCTCAAGGGCGTGCACCAGgcgcgc                                                                                                                      >  1:1288314/1‑150 (MQ=255)
                             tCGTCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTggg                                                                                                                  >  2:1537463/1‑150 (MQ=255)
                              cGTCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGgt                                                                                                                 <  2:1652784/150‑1 (MQ=255)
                                tCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCTGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCa                                                                                                                             <  1:37060/136‑1 (MQ=255)
                                tCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGGCGCTCAAGGGCGTGCACCAGGCGCGCTGGgtgg                                                                                                               >  1:666226/1‑149 (MQ=255)
                                tCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCa                                                                                                                             >  2:37060/1‑136 (MQ=255)
                                        gcgTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTgg                                                                                                                   >  2:1536185/1‑138 (MQ=255)
                                        gcgTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTgg                                                                                                                   <  1:1536185/138‑1 (MQ=255)
                                        gcgTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCgg                                                                                                       <  1:1137039/150‑1 (MQ=255)
                                        gcgTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCgg                                                                                                       <  1:1758267/150‑1 (MQ=255)
                                         cgTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCggg                                                                                                      <  2:629202/150‑1 (MQ=255)
                                          gTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGc                                                                                                     >  2:196192/1‑150 (MQ=255)
                                          gTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGc                                                                                                     <  2:58741/150‑1 (MQ=255)
                                          gTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGc                                                                                                     >  2:1194569/1‑150 (MQ=255)
                                               ggCCTCACGACTATGCCAGCAACCGGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCt                                                                                                >  2:1627810/1‑150 (MQ=255)
                                                   tCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGcc                                                                                            >  2:1895792/1‑150 (MQ=255)
                                                   tCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGCTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACCCTCACCTGACGCTCAAGGGCGTGCACCAGCCGCGCTGGGTGTTGCCGCGGGCCGGCTCGcc                                                                                            >  1:909405/1‑150 (MQ=255)
                                                     aCGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCgg                                                                                          >  1:76083/1‑150 (MQ=255)
                                                       gACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGc                                                                                                                                     >  2:1848564/1‑105 (MQ=255)
                                                       gACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGc                                                                                                                                     <  1:1848564/105‑1 (MQ=255)
                                                       gACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTgg                                                                                                                   >  1:1361413/1‑123 (MQ=255)
                                                       gACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTgg                                                                                                                   <  2:1361413/123‑1 (MQ=255)
                                                        aCTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGccc                                                                                       <  1:196192/150‑1 (MQ=255)
                                                          tATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGt                                                                                     >  1:799365/1‑150 (MQ=255)
                                                             gCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGgt                                                                                                                 >  2:1835002/1‑119 (MQ=255)
                                                             gCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGgt                                                                                                                 <  1:1835002/119‑1 (MQ=255)
                                                               cAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAgct                                                                                >  2:312676/1‑150 (MQ=255)
                                                               cAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAgct                                                                                >  2:206405/1‑150 (MQ=255)
                                                                   gACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTc                                                                            >  1:324581/1‑150 (MQ=255)
                                                                                    gCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTcgccgc                                                           >  1:227230/1‑150 (MQ=255)
                                                                                           aaCGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGc                                                    >  2:1058711/1‑150 (MQ=255)
                                                                                            aCGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGcc                                                   <  2:987370/150‑1 (MQ=255)
                                                                                                        tggtgCTGGCCCGTCGGGGCCAACCGCTGTCGAAACCTCCCATGACGTTGAAGCGCTTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGt                                       <  2:1288314/150‑1 (MQ=255)
                                                                                                           tgCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTc                                                                                                                                           <  1:1498573/47‑1 (MQ=255)
                                                                                                           tgCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTc                                                                                                                                           >  2:1498573/1‑47 (MQ=255)
                                                                                                             cTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCg                                  <  1:303475/150‑1 (MQ=255)
                                                                                                                gCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCggtg                               >  1:1609377/1‑150 (MQ=255)
                                                                                                                 cccGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCgg                                                      >  2:1691363/1‑126 (MQ=255)
                                                                                                                 cccGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCgg                                                      <  1:1691363/126‑1 (MQ=255)
                                                                                                                 cccGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCggtgg                              <  2:1265123/150‑1 (MQ=255)
                                                                                                                   cGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGgtggtg                            <  1:1194569/150‑1 (MQ=255)
                                                                                                                        ggggCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGGTGGTGGAAAg                       >  1:695930/1‑150 (MQ=255)
                                                                                                                          ggCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGGtggtggcaccca                     <  2:1640707/150‑7 (MQ=255)
                                                                                                                           gCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGGTGGTGGAAAgcgc                    <  1:1436464/150‑1 (MQ=255)
                                                                                                                           gCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGGTGGTGGAAAgcgc                    <  2:324581/150‑1 (MQ=255)
                                                                                                                             aCCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCggg                                                     <  1:208538/115‑1 (MQ=255)
                                                                                                                             aCCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCggg                                                     >  2:208538/1‑115 (MQ=255)
                                                                                                                               ccGCTGTTGCACACTTACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGgtggtg                            <  1:1802628/138‑1 (MQ=255)
                                                                                                                               ccGCTGTTGCACACTTACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGgtggtg                            <  1:1802869/138‑1 (MQ=255)
                                                                                                                               ccGCTGTTGCACACTTACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGgtggtg                            >  2:1802869/1‑138 (MQ=255)
                                                                                                                               ccGCTGTTGCACACTTACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGgtggtg                            >  2:1802628/1‑138 (MQ=255)
                                                                                                                               ccGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGGTGGTGGAAAGCGCTGAt                >  2:1496290/1‑150 (MQ=255)
                                                                                                                                          cacTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGGTGGTGGAAAGCGCTGATCTGGCGGTTAt     >  2:737409/1‑150 (MQ=255)
                                                                                                                                             tCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAgcgc                                          <  2:1376100/110‑1 (MQ=255)
                                                                                                                                             tCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAgcgc                                          >  1:1376100/1‑110 (MQ=255)
                                                                                                                                             tCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGGGGGCGGAAAGCGCTGATCTGGCGGTTATCCg  >  1:466592/1‑150 (MQ=255)
                                                                                                                                             tCACCTGACGCTCAAGGGCGTGCACCAGGAGCGGTGGGTGTTGCTGCGGGCCGGCTCGCCTGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGGTGGTGGAAAGCGCTGATCTGGCGGTTATCCg  >  2:513208/1‑150 (MQ=255)
                                                                                                                                              |                                                                                                                                                    
AACCGAGCTGCGGGTAGGGGATGTGGATTTCGTCTTGGGCGCGTTGCGGCCTCACGACTATGCCAGCGACCTGGTGGGCGAGCCGCTCATCAACGAGGAAATGGTGGTGCTGGCCCGTCGGGGGCACCCGCTGTTGCACACTCACCTGACGCTCAAGGGCGTGCACCAGGCGCGCTGGGTGTTGCCGCGGGCCGGCTCGCCGGCCCGTCAGCTGCTCGACAACTGCTTCGCCGCCGCGGGCCTGACAGCGCCGTGGCCGGTGGTGGAAAGCGCTGATCTGGCGGTTATCCG  >  NC_002947/2863676‑2863966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: