| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,882,554 | A→G | 5.9% | *103W (TAG→TGG) | PP_2537 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,882,554 | 0 | A | G | 5.9% | 352.2 / 6.4 | 117 | *103W (TAG→TGG) | PP_2537 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (57/53); new base G (3/4); total (60/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
ACCGAGATCACCCGCAAGGCCATCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGTTGGCCG > NC_002947/2882406‑2882701 | aCCGAGATCACCCGCAAGGCCATCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAg > 2:1798944/1‑150 (MQ=255) gaTCACCCGCAAGGCCATCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCAAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CTTCAGTCGCGCGAATTCTGGGGCGAAGCCTAGCCAgg < 2:1677147/150‑1 (MQ=255) cACCCGCAAGGCCATCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCtt > 2:1737054/1‑150 (MQ=255) aCCCGCAAGGCCATCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑g > 2:1890305/1‑150 (MQ=255) ccGCAAGGCCATCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGC‑GGGGCGAAGCCTAGCCAGGCTT‑GCCt > 2:32443/1‑150 (MQ=255) cgaaaGGCCATCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCt > 2:388389/4‑150 (MQ=255) cAAGGCCATCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGC‑AAGCCTGGCTAGGCttcgccccc < 2:1097035/150‑8 (MQ=255) cAAGGCCATCGACAGGCCTGACGACCGACAGGTGATGATGAAGGCCACGTATTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTgg < 2:371986/150‑1 (MQ=255) aCAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAAc > 1:1081500/1‑150 (MQ=255) aCAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAAc < 2:1835848/150‑1 (MQ=255) aGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACtt < 2:871808/150‑1 (MQ=255) aGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACtt < 1:328231/150‑1 (MQ=255) tGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATCGCCAAGTCACTGATCGACGGCCAAATGCTGCAGATA‑CGCCAGGCGCGCACAGGCGGGGGCTACGGCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCAc > 2:952272/1‑150 (MQ=255) ccGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTGGCTAGGCttcgcc > 2:849767/1‑120 (MQ=255) ccGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTGGCTAGGCttcgcc < 1:849767/124‑5 (MQ=255) ccGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTgg > 2:914937/1‑150 (MQ=255) cAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCgg > 1:664205/1‑150 (MQ=255) ggTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGtt < 2:1035813/150‑1 (MQ=255) tgatgatgaAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGtttt > 2:847855/1‑150 (MQ=255) atgatgaAGTCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTaa < 1:1537610/150‑1 (MQ=255) atgatgaAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTaa > 1:1516470/1‑150 (MQ=255) atgatgaAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTaa < 2:664205/150‑1 (MQ=255) tgatgaAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAAt > 1:1114212/1‑150 (MQ=255) atgaAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCg > 1:1240388/1‑150 (MQ=255) gaAGGCCACGTACTATCAGTCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTc > 1:559112/1‑150 (MQ=255) aGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTg < 2:1281928/150‑1 (MQ=255) ggCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAg > 1:135475/1‑98 (MQ=255) ggCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAg < 2:135475/98‑1 (MQ=255) gCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGACGGTTTTAACCGTcatta < 2:483282/150‑5 (MQ=255) ccACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACtt < 1:886588/119‑1 (MQ=255) cACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCGGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAg > 1:1563555/1‑91 (MQ=255) gTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTggg > 1:1670717/1‑127 (MQ=255) gTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTggg < 2:1670717/127‑1 (MQ=255) gTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACg > 2:1897446/1‑150 (MQ=255) tactacCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGt > 2:1634613/1‑130 (MQ=255) tactacCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGt < 1:1634613/130‑1 (MQ=255) ctacCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACa < 1:105978/150‑1 (MQ=255) tacCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGa > 1:406529/1‑147 (MQ=255) tacCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGa < 2:406529/147‑1 (MQ=255) ccTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGttt > 2:206291/1‑127 (MQ=255) ccTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGttt < 1:206291/127‑1 (MQ=255) ccTGGCCGGGATGGCCAAGTCACTGATCGACGACCAGACGCTGCAGTCA‑TGTTAGCGGCGCGAAGGCTGTTACTGAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGaa > 1:528838/1‑150 (MQ=255) tGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑Gcc < 1:75706/91‑1 (MQ=255) tGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑Gcc > 2:75706/1‑91 (MQ=255) tGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGNACTTGGNACCCTTGGGCGGNTTTAATCGTCTGTAACACGACAGAAgg < 1:1798944/150‑1 (MQ=255) tGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAgg > 2:1243434/1‑150 (MQ=255) gggATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGC‑GGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACAt < 1:32443/150‑1 (MQ=255) aTGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGc < 1:158497/150‑1 (MQ=255) gCCCAGGCACTGACCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGCGAGAAGCCTAGCCAGGCTT‑GCATGGGGGGCGCGCACTTGGCACCCTAGGGCGCTTTTCATCGTCTTTAACACGACAGAAGGAAACATGCAtt < 2:771523/150‑1 (MQ=255) gCCAAGTCACTGATCGACGACCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCAtt < 2:528838/150‑1 (MQ=255) cAAGTCACTGATCGACGGCCAGCTGCTGTAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGa > 1:1716941/1‑150 (MQ=255) aCTGATCGACGGCCAGCTGCTGCAGATC‑CGTCAGGCGCGCGGCGGCCGGGGCGAGGCCTAGCCAGGCTT‑GCATGCGTGGCGCGAACTCGGCACCACGGAGCGGGGTTACTCGGCTGCAACACGACAGAAGGCAACCCGCATCGAgagggg > 1:1886601/1‑145 (MQ=255) aCTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTggg < 1:11516/150‑1 (MQ=255) aCTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTggg > 2:1015160/1‑150 (MQ=255) aCTGATCGACGGCCAGCTGCTGCA‑ATATTTTGAGGCGCGCGAAGGCGGGGGCGAAGGCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGTGGTTTTAATCGTCTGTAACACGACAGAAGGAAAAATGCATTGAGCTggg > 1:942632/1‑150 (MQ=255) cTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGa < 2:953940/150‑1 (MQ=255) cTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGa < 1:1243434/150‑1 (MQ=255) tGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCt < 2:1210066/113‑1 (MQ=255) tGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCt > 1:1210066/1‑113 (MQ=255) gATCGACGGCCAGCTGCTGCAGATA‑TGTCAGGCGCGCGAAGGCGGGGGGGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTgg > 2:1120286/1‑146 (MQ=255) aTCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTa < 1:1544166/104‑1 (MQ=255) aTCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTa > 2:1544166/1‑104 (MQ=255) aTCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACaa < 1:1890305/150‑1 (MQ=255) aTCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCAACATTTGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACaa > 1:1479357/1‑150 (MQ=255) gACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCa > 1:1044513/1‑85 (MQ=255) gACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGt > 2:835872/1‑150 (MQ=255) gACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGt > 1:812479/1‑150 (MQ=255) gACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGCCGCGAACTTGGCa < 2:1044513/85‑1 (MQ=255) aCGGCCGGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGGGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGGTTTAATCGTATGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTg > 2:822030/1‑150 (MQ=255) cGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTgg < 1:1897446/150‑1 (MQ=255) ggCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTggg < 2:1114212/150‑1 (MQ=255) cAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGt > 2:1320482/1‑100 (MQ=255) cAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACa < 1:883433/113‑1 (MQ=255) cAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACa > 2:883433/1‑113 (MQ=255) ctgctgCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGtt > 2:1732545/1‑89 (MQ=255) ctgctgCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGtt < 1:1732545/89‑1 (MQ=255) ctgctgCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGCCACACTTCGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCt < 2:1826793/150‑1 (MQ=255) tgctgcAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTCATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCt > 2:750806/1‑130 (MQ=255) tgctgcAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACCCGACAGAAGGAAACATGCATTGAGCt < 1:750806/130‑1 (MQ=255) ctgcAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGc < 2:1221255/146‑1 (MQ=255) ctgcAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGc > 1:1221255/1‑146 (MQ=255) tgcAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTtctc < 2:1764258/150‑1 (MQ=255) tgcAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTtctc < 2:1516470/150‑1 (MQ=255) aTA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAg < 1:1927415/130‑1 (MQ=255) aTA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAg > 2:1927415/1‑130 (MQ=255) tCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTg > 2:944800/1‑59 (MQ=255) tCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTg < 1:944800/59‑1 (MQ=255) tCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGc > 1:1605350/1‑150 (MQ=255) tCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGc < 1:914937/150‑1 (MQ=255) aGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCAtt < 1:431757/110‑1 (MQ=255) aGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCAtt > 2:431757/1‑110 (MQ=255) gcgAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTggg < 1:774664/122‑1 (MQ=255) gAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCt < 1:1015160/150‑1 (MQ=255) caggcaaGCCTGGCTAGGCTTCGCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTc > 1:1122725/6‑150 (MQ=255) gcaaGCCTGGCTAGGCTTCGCCT‑GGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTggg > 1:989979/3‑109 (MQ=255) cGAATCCTAGCCAGGCTT‑GCCTTGGTGGCGAGAACTTGGCACACCTCCGAGATCTTAATCGTCTGTAACACGACATAAGGAAACATGCATTGACCTGTCAAAAGGTGGGTAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGt < 2:942632/150‑1 (MQ=255) gAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGtt > 1:441333/1‑150 (MQ=255) ccTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAg > 2:1041274/1‑108 (MQ=255) ccTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAg < 1:1041274/108‑1 (MQ=255) cTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGTTGgccg > 2:1454101/1‑150 (MQ=255) | ACCGAGATCACCCGCAAGGCCATCGACAGGCCTGACGACCGCCAGGTGATGATGAAGGCCACGTACTACCTGGCCGGGATGGCCAAGTCACTGATCGACGGCCAGCTGCTGCAGATA‑CGTCAGGCGCGCGAAGGCGGGGGCGAAGCCTAGCCAGGCTT‑GCCTGGGGGGCGCGAACTTGGCACCCTTGGGCGGTTTTAATCGTCTGTAACACGACAGAAGGAAACATGCATTGAGCTGGGACAAGGTGGGGAAGCTTCTCGTCGCCGTGCTGATCGGCCTGATGGTCCTGTTGGCCG > NC_002947/2882406‑2882701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |