Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,889,586 A→T 5.4% N184I (AAC→ATC)  gabP‑II → gamma‑aminobutyrate permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,889,5860AT 5.4% 260.5 / 3.6 87N184I (AAC→ATC) gabP‑IIgamma‑aminobutyrate permease
Reads supporting (aligned to +/- strand):  ref base A (45/37);  new base T (2/3);  total (47/40)
Fisher's exact test for biased strand distribution p-value = 6.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AACGTGTTCGTGCTGGCCACAACCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGTTACCATCGCGGCCTCCGAAG  >  NC_002947/2889438‑2889735
                                                                                                                                                    |                                                                                                                                                       
aaCGTGTTCGTGCTGGCCACAACCCTGTTGCTTATCACCGTCAACTTCTTCAACGTCAAGCACTACCGCTTCTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAAc                                                                                                                                                        <  1:1392846/150‑1 (MQ=255)
aaCGTGTTCGTGCTGGCCACAACCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAAc                                                                                                                                                        >  2:1266306/1‑150 (MQ=255)
 aCGTGTTCGTGCTGGCGACAACCCTGTTGCGGATCACGGTCAACTTCTTCAACGTTAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGATGCCGTGATGAACa                                                                                                                                                       >  1:937195/1‑150 (MQ=39)
     gTTCGTGCTGGCCACAACCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTg                                                                                                                                                   <  2:1906471‑M2/150‑2 (MQ=255)
                 cacaACCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGa                                                                                                                                     >  1:712902/1‑150 (MQ=255)
                    aaCCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGt                                                                                                                                        >  1:773484/1‑145 (MQ=255)
                    aaCCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGt                                                                                                                                        <  2:773484/145‑1 (MQ=255)
                       ccTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCg                                                                                                                               >  1:1052177/1‑150 (MQ=255)
                       ccTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCg                                                                                                                               >  2:1893575/1‑150 (MQ=255)
                               tGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCa                                                                                                                       <  1:758894/150‑1 (MQ=255)
                               tGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCa                                                                                                                       <  1:218603/150‑1 (MQ=255)
                                 aTCACCGTCAACTTCGTCGACGTCAAGCACTACGGTGAGTTCGAGTTGTGGTTCGCCTTGATCAAGGTGATTGCGATCGTGTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGc                                                                                                                     <  2:548172/150‑1 (MQ=255)
                                  tCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGcc                                                                                                                    <  2:1188989/150‑1 (MQ=255)
                                  tCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGcc                                                                                                                    >  1:1177372/1‑150 (MQ=255)
                                     ccGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCAcc                                                                                                                 >  1:782019/1‑150 (MQ=255)
                                       gTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGc                                                                                                                     <  2:1845684/144‑1 (MQ=255)
                                       gTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGc                                                                                                                     >  1:1845684/1‑144 (MQ=255)
                                          aaCTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCAGATGTTCATCAcggcagccgtacacacga                                                                                                                                  <  2:1711646‑M2/129‑19 (MQ=255)
                                          aaCTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCAGATGTTCATCAcggcagccgtacacacga                                                                                                                                  >  1:1711646‑M2/1‑111 (MQ=255)
                                           aCTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCAccg                                                                                                           >  2:1633296/1‑150 (MQ=255)
                                            cttcttCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCAccgc                                                                                                          >  2:906717/1‑150 (MQ=255)
                                             ttcttcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTg                                                                                                                                       >  1:428329/1‑121 (MQ=255)
                                             ttcttcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTg                                                                                                                                       <  2:428329/121‑1 (MQ=255)
                                                ttcAACGTTAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTTCGTGGCATCAGCCACCTCACCGCCGaa                                                                                                      <  2:937195/150‑1 (MQ=255)
                                                ttcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGaa                                                                                                      >  1:813937/1‑150 (MQ=255)
                                                ttcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGaa                                                                                                      >  1:216916/1‑150 (MQ=255)
                                                ttcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGaa                                                                                                      >  1:1732452/1‑150 (MQ=255)
                                                 tcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAAc                                                                                                                                                        <  2:321812/101‑1 (MQ=255)
                                                 tcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAAc                                                                                                                                                        >  1:321812/1‑101 (MQ=255)
                                                  cAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAgg                                                                                                    >  1:24619/1‑150 (MQ=255)
                                                       tCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACGGCCGAAGGCTTCa                                                                                               >  1:870615/1‑150 (MQ=255)
                                                        cAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCAt                                                                                              <  2:813937/150‑1 (MQ=255)
                                                         aaGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAg                                                                                                     >  2:810985/1‑142 (MQ=255)
                                                         aaGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAg                                                                                                     <  1:810985/142‑1 (MQ=255)
                                                         aaGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATg                                                                                             >  1:1433710/1‑150 (MQ=255)
                                                          aGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGc                                                                                            <  1:733884/150‑1 (MQ=255)
                                                           gCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGCTGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGcc                                                                                           >  1:1781865/1‑150 (MQ=255)
                                                           gCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTgg                                                                                                                                                  <  2:1759816‑M2/97‑3 (MQ=255)
                                                           gCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTgg                                                                                                                                                  >  1:1759816‑M2/1‑95 (MQ=255)
                                                              cTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCaa                                                                                        <  2:1433710/150‑1 (MQ=255)
                                                              cTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCaa                                                                                        <  1:1633296/150‑1 (MQ=255)
                                                               tACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCAccgc                                                                                                          >  2:1541375/1‑131 (MQ=255)
                                                               tACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCAccgc                                                                                                          <  1:1541375/131‑1 (MQ=255)
                                                                        ttcgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAg                                                                                                                      <  2:940676/110‑1 (MQ=255)
                                                                        ttcgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAg                                                                                                                      >  1:940676/1‑110 (MQ=255)
                                                                        ttcgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCAc                                                                                                             <  1:1201247/119‑1 (MQ=255)
                                                                        ttcgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCAc                                                                                                             >  2:1201247/1‑119 (MQ=255)
                                                                        ttcgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATcacc                                                                              >  2:312866/1‑150 (MQ=255)
                                                                         tcgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGCTCATCTGGCAGTTCGGTTAAGTTCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATcacca                                                                             <  1:1206360/150‑1 (MQ=255)
                                                                          cgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATcaccac                                                                            >  1:107163/1‑150 (MQ=255)
                                                                          cgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATcaccac                                                                            <  1:1266306/150‑1 (MQ=255)
                                                                             gttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACtgt                                                                         >  2:348097/1‑150 (MQ=255)
                                                                              ttcTGGTTCGCCTTGATCAAGGGGACTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACtgtg                                                                        >  2:871100/1‑150 (MQ=255)
                                                                                  ggTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTgg                                                                                                                                                  <  1:1830155‑M2/74‑3 (MQ=255)
                                                                                  ggTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTgg                                                                                                                                                  >  2:1830155‑M2/1‑72 (MQ=255)
                                                                                    ttCGCCTTGATCAAGGTGATTGCGATCGGCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGt                                                                  >  1:345607/1‑150 (MQ=255)
                                                                                        ccTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCt                                                              >  2:974818/1‑150 (MQ=255)
                                                                                               cAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCt                                                                                                                                                    <  2:1844126/59‑1 (MQ=255)
                                                                                               cAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCt                                                                                                                                                    >  1:1844126/1‑59 (MQ=255)
                                                                                               cAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCCCCTCACCGCCGAAGGCTTCATGCCCGAGGGCATCACCACTGTGATCGGTGCCTTGCTCgg                                                       <  2:712902/150‑1 (MQ=255)
                                                                                                aaGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGCACATCT‑‑CATCCAGGAAGCAATTGCGTCGAATCAGCCACCTCACCGCCGCAGGCTTCCTGCCAAATGGCATCACCACTGTGATCGGTGCCTTGCTCggg                                                      <  1:1893575/150‑1 (MQ=255)
                                                                                                aaGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCggg                                                      <  2:1052177/150‑1 (MQ=255)
                                                                                                 aGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTg                                                                                                                             <  1:564852/78‑1 (MQ=255)
                                                                                                 aGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTg                                                                                                                             >  2:564852/1‑78 (MQ=255)
                                                                                                 aGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCgggg                                                     <  2:782019/150‑1 (MQ=255)
                                                                                                 aGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCgggg                                                     <  1:348097/150‑1 (MQ=255)
                                                                                                  ggTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACGACTGTCATCGGTGCCTTGCTCggggg                                                    >  2:434013/1‑149 (MQ=255)
                                                                                                  ggTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCAGATGTTCATCAcggcagccgtacacacgatcaggaagcagacga                                                                                                                   >  1:458766‑M2/1‑55 (MQ=255)
                                                                                                  ggTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCAGATGTTCATCAcggcagccgtacacacgatcaggaagcagacga                                                                                                                   <  2:458766‑M2/88‑34 (MQ=255)
                                                                                                   gTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTg                                                   <  2:1177372/150‑1 (MQ=255)
                                                                                                    tGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGa                                                  <  1:312866/150‑1 (MQ=255)
                                                                                                     gATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGAt                                                 >  1:1638537/1‑150 (MQ=255)
                                                                                                         gCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTc                                             <  2:107163/150‑1 (MQ=255)
                                                                                                            aTCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCCGGAAACGCTCCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGcc                                          >  1:723113/1‑150 (MQ=255)
                                                                                                                      tCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGgcg                                >  1:1307434/1‑150 (MQ=255)
                                                                                                                         tGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGAATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCg                             >  1:371024/1‑150 (MQ=255)
                                                                                                                         tGATCGAGTGTACGGCACCCGCGATGAACATCTGCCAGCTCGGTGAACTGCGAGGCATCAGCCACCTGACCGCCGAAGGCGTCATGCCCAATAGCATCACCTCTGTGATCAGTGCCTCACTCGGGGTGATGTTCGCCTTCCTCGGCGCCg                             >  2:294864/1‑150 (MQ=255)
                                                                                                                              gtgtgtACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATc                        <  2:1638537/150‑1 (MQ=255)
                                                                                                                              gtgtgtACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTAGGCGCCGCAAta                        >  1:1614527/1‑149 (MQ=255)
                                                                                                                                  gtACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGTTa                    <  2:345607/150‑1 (MQ=255)
                                                                                                                                  gtACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGTTa                    <  1:974818/150‑1 (MQ=255)
                                                                                                                                         tGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGTTACCATcgc             >  2:55754/1‑150 (MQ=255)
                                                                                                                                               gatgaACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGTTACCATCGCGGCCTc       >  1:828686/1‑150 (MQ=255)
                                                                                                                                                atgaACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGtt                                              >  2:1882985/1‑110 (MQ=255)
                                                                                                                                                atgaACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGtt                                              <  1:1882985/110‑1 (MQ=255)
                                                                                                                                                  gaACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTTTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGtt                     >  2:1408971/1‑133 (MQ=255)
                                                                                                                                                  gaACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTTTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGtt                     <  1:1408971/133‑1 (MQ=255)
                                                                                                                                                    aCATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCggg                                                      <  2:1587609/98‑1 (MQ=255)
                                                                                                                                                    aCATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCggg                                                      >  1:1587609/1‑98 (MQ=255)
                                                                                                                                                    aCATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGTTACCATCGCGGCCTCCGAAg  >  1:1874585/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                       
AACGTGTTCGTGCTGGCCACAACCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGTTACCATCGCGGCCTCCGAAG  >  NC_002947/2889438‑2889735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: