Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,941,385 T→G 9.5% C192G (TGC→GGC)  PP_2574 → LysR family transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,941,3850TG 9.5% 165.5 / 11.3 63C192G (TGC→GGC) PP_2574LysR family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (30/27);  new base G (3/3);  total (33/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.18e-01

CTGGAACATTCGACCTGGCATTTCTCTATGACCACGACCTGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTC  >  NC_002947/2941236‑2941528
                                                                                                                                                     |                                                                                                                                               
cTGGAACATTCGACCTGGCATTTCTCTATGACCACGACCTGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCtgt                                                                                                                                                 <  1:394272/150‑1 (MQ=255)
    aaCATTCGACCTGGCATTTCTCTATGACCACGACCTGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGccc                                                                                                                                             <  2:828683/150‑1 (MQ=255)
       aTTCGACCTGGCATTTCTCTATGACCACGACCTGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGa                                                                                                                                          <  1:1219071/150‑1 (MQ=255)
       aTTCGACCTGGCATTTCTCTATGACCACGACCTGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGa                                                                                                                                          <  1:175501/150‑1 (MQ=255)
            aCCTGGCATTTCTCTATGACCACGACCTGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCga                                                                                                                                     <  2:1650034/150‑1 (MQ=255)
               tGGCATTTCTCTATGACCACGACCTGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCgatga                                                                                                                                  >  2:1245096/1‑150 (MQ=255)
                 gCATTTCTCTATGACCACGACCTGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTGCACAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATc                                                                                                                                <  2:271955/150‑1 (MQ=255)
                   aTTTCTCTATGACCACGACCTGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCGCGCAGCGAGACCTGGGcct                                                                                                                                             >  2:689312/1‑134 (MQ=255)
                   aTTTCTCTATGACCACGACCTGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCGCGCAGCGAGACCTGGGcct                                                                                                                                             <  1:689312/135‑2 (MQ=255)
                            tGACCACGACCTGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGt                                                                                                                     <  1:1916064/150‑1 (MQ=255)
                                      cTGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGc                                                                                                           >  2:1068458/1‑150 (MQ=255)
                                       tGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATc                                                                                                                                >  1:1462837/1‑128 (MQ=255)
                                       tGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATc                                                                                                                                <  2:1462837/128‑1 (MQ=255)
                                        ggATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCg                                                                                                         >  2:1879617/1‑150 (MQ=255)
                                               aCTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTAc                                                                                                  <  2:31428/150‑1 (MQ=255)
                                                   tCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTg                                                                                              >  1:1846417/1‑150 (MQ=255)
                                                     gAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCg                                                                                                                                            >  1:1864725/1‑102 (MQ=255)
                                                     gAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCg                                                                                                                                            <  2:1864725/102‑1 (MQ=255)
                                                        gCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGc                                                                                         >  2:300970/1‑150 (MQ=255)
                                                          cGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCct                                                                                                                              <  2:22080/111‑1 (MQ=255)
                                                          cGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCct                                                                                                                              >  1:22080/1‑111 (MQ=255)
                                                                gCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCaa                                                                                 >  1:1627443/1‑150 (MQ=255)
                                                                 cTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAAc                                                                                >  2:145400/1‑150 (MQ=255)
                                                                   gATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACga                                                                              >  1:1499742/1‑150 (MQ=255)
                                                                          ccgcAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTATCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGc                                                                       <  2:1366269/150‑1 (MQ=255)
                                                                          ccgcAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGc                                                                       >  1:1518303/1‑150 (MQ=255)
                                                                           cgcAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCt                                                                     <  1:656763/150‑1 (MQ=255)
                                                                                    ccTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCACAGGTCGCGCAGCGAGACCTGGGcctgg                                                                                                                                           >  1:1565686/1‑69 (MQ=21)
                                                                                    ccTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCACAGGTCGCGCAGCGAGACCTGGGCCTgg                                                                                                                                           <  2:1565686/72‑1 (MQ=18)
                                                                                     cTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTgg                                                                                                                   <  1:91494/95‑1 (MQ=255)
                                                                                     cTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTgg                                                                                                                   >  2:91494/1‑95 (MQ=255)
                                                                                      tATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAAc                                                           <  2:1518303/150‑1 (MQ=255)
                                                                                         gtgCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATc                                                        <  1:313591/150‑1 (MQ=255)
                                                                                         gtgCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATc                                                        <  1:1879617/150‑1 (MQ=255)
                                                                                            ctgctACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACgaga                                                                            <  1:1923133/127‑1 (MQ=255)
                                                                                            ctgctACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACgaga                                                                            >  2:1923133/1‑127 (MQ=255)
                                                                                            ctgctACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTc                                                     <  2:1499742/150‑1 (MQ=255)
                                                                                                tACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGt                                                                                     <  2:1271681/114‑1 (MQ=255)
                                                                                                tACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGt                                                                                     >  1:1271681/1‑114 (MQ=255)
                                                                                                 aCCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAg                                                >  1:303067/1‑150 (MQ=255)
                                                                                                  cccGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACATGCTCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGt                                               >  1:33683/1‑150 (MQ=255)
                                                                                                    cGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCGTGCACCGAACAGCGTCTTCCGTTc                                             >  2:507877/1‑150 (MQ=255)
                                                                                                          ccaccGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACgaga                                                                            <  2:165441/113‑1 (MQ=255)
                                                                                                          ccaccGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACgaga                                                                            >  1:165441/1‑113 (MQ=255)
                                                                                                           caccGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGtcg                                      >  2:849692/1‑150 (MQ=255)
                                                                                                           caccGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGtcg                                      >  2:1133630/1‑150 (MQ=255)
                                                                                                           caccGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGtcg                                      >  1:886673/1‑150 (MQ=255)
                                                                                                           caccGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGtcg                                      >  1:887292/1‑150 (MQ=255)
                                                                                                           caccGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGAGACCTGGGCCTGGCGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGtcg                                      >  2:670196/1‑150 (MQ=255)
                                                                                                            accGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGTCCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGtcga                                     <  1:1245096/150‑1 (MQ=255)
                                                                                                            accGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGtcga                                     >  2:1690074/1‑150 (MQ=255)
                                                                                                                cTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATACTCCTGCTGTGCGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGGCTGGCACCGAACATCGTCTTCAGTTCACCGtcgatcaa                                 >  2:752080/1‑148 (MQ=255)
                                                                                                                      cagccagGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGt                           >  2:1602750/1‑150 (MQ=255)
                                                                                                                               ccAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATc                                                                                                                                <  2:925675/40‑1 (MQ=255)
                                                                                                                               ccAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATc                                                                                                                                >  1:925675/1‑40 (MQ=255)
                                                                                                                                        gCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCATGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCa         >  1:1478915/1‑150 (MQ=255)
                                                                                                                                         cTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCCCAATAGTGCGCGGCATGGTCGGTCAg        <  2:1627443/150‑1 (MQ=255)
                                                                                                                                          tGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAgg       >  1:915222/1‑150 (MQ=255)
                                                                                                                                          tGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAgg       <  1:145400/150‑1 (MQ=255)
                                                                                                                                          tGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACAGCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAgg       <  2:303067/150‑1 (MQ=255)
                                                                                                                                          tGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCAAAGTCCGTTGTTTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAgg       <  1:1593912/150‑1 (MQ=255)
                                                                                                                                               gACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGcgcg                      <  1:1168213/130‑1 (MQ=255)
                                                                                                                                               gACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGcgcg                      >  2:1168213/1‑130 (MQ=255)
                                                                                                                                               gACCTGGGCCTGGCGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTc  <  1:670196/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                               
CTGGAACATTCGACCTGGCATTTCTCTATGACCACGACCTGGATGGCACTATCGAGGCCGAGCCGCTGATGCCGCCGCAGAAGCCCTATGTGCTGCTACCCGAGAACCACCGCTTTGCCAGCCAGGCCCAGGTCTCGCTGCGCGACCTGTGCCCGGAGCCGATGATCCTGCTGGACGTGGCCCCTAGCCGCACGTACTTTGTCAGCTTGTTCAACGAGATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTC  >  NC_002947/2941236‑2941528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: