| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,008,361 | C→T | 5.0% | S259S (TCG→TCA) | PP_2628 ← | ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,008,361 | 0 | C | T | 5.0% | 236.7 / 2.1 | 79 | S259S (TCG→TCA) | PP_2628 | ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (35/40); new base T (2/2); total (37/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.51e-01 | |||||||||||
GCTCACCAGGCGCATCTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGGGCAAAGCCGCCGGCCAGGGCAATGATCGCGATGAAAT > NC_002947/3008217‑3008509 | gCTCACCAGGCGCATCTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCg > 2:55158/1‑150 (MQ=255) cTCACCAGGCGCATCTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCgg < 1:411651/150‑1 (MQ=255) tCACCAGGCGCATCTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGCCGCCCgcg > 1:1817028/1‑148 (MQ=255) tCACCAGGCGCATCTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCggg > 1:349578/1‑150 (MQ=255) ccAGGCGCATCTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCGTCGATGACCGGGcgg < 2:1038100/150‑3 (MQ=255) cAGGCGCATCTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCAtt > 1:1266574/1‑150 (MQ=255) cAGGCGCATCTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCAtt < 1:55158/150‑1 (MQ=255) gcgcATCTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGc < 2:1492562/150‑1 (MQ=255) gcgcATCTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGc < 2:1136796/150‑1 (MQ=255) cATCTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTg < 2:1101824/150‑1 (MQ=255) cTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTg < 2:277366/142‑1 (MQ=255) cTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTg > 1:277366/1‑142 (MQ=255) ggCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCt > 1:1350027/1‑150 (MQ=255) gCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCATGCTCCTg > 2:851114/1‑150 (MQ=255) gAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGcc > 2:622307/1‑150 (MQ=255) gAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGCTCATCGACGACCGGGCATTGGCCTGCTCCTGcc > 1:456530/1‑150 (MQ=255) aCCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGAc > 1:517186/1‑150 (MQ=255) tCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGcg > 1:1655693/1‑124 (MQ=255) tCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGcg < 2:1655693/125‑2 (MQ=255) tCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGc > 1:387996/1‑150 (MQ=255) cTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAg > 2:1049424/1‑150 (MQ=255) tGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGcc > 1:129271/1‑150 (MQ=255) aaTCTTCCATGGCTGCGCACGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGAcc < 1:1083740/137‑1 (MQ=255) aaTCTTCCATGGCTGCGCACGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGAcc > 2:1083740/1‑137 (MQ=255) aTGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGaaa < 2:129271/150‑1 (MQ=255) aTGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGaaa < 2:517186/150‑1 (MQ=255) tGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGAcc < 2:1352289/128‑1 (MQ=255) tGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGAcc > 1:1352289/1‑128 (MQ=255) cTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAATCCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACa < 1:22950/150‑1 (MQ=255) tGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAg < 2:149673/150‑1 (MQ=255) tGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAg < 2:483011/150‑1 (MQ=255) gcgcgcAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCAt < 2:1151837/150‑1 (MQ=255) ccgcgcACAGTGCGCTTCGCGGTTGGAGTGCGAAACCAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCCACCTTGCCCAGCCGGGGGACGAAATACCGCAt < 2:1155464/149‑1 (MQ=255) cgctcAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTAATATCGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATg < 1:1180571/150‑1 (MQ=255) cgcgcAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGCGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATg < 2:530175/150‑1 (MQ=255) gcgcAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATgg < 1:851114/150‑1 (MQ=255) gcgcAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATgg > 1:1535080/1‑150 (MQ=255) cgcAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGCTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGc < 1:1666540/150‑1 (MQ=255) aaaGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCaa < 2:402596/150‑1 (MQ=255) aaaGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCaa > 2:1010997/1‑150 (MQ=255) ggtggggttCGCGGTTGGAGTGGGAAAACAGGTTTGCCGTGGTGATGTTGGTGGAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGc < 2:1817028/143‑1 (MQ=255) ttCGCTGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCggg > 2:1935248/1‑119 (MQ=255) ttCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCggg < 1:1935248/119‑1 (MQ=255) ttCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACa < 1:797643/131‑1 (MQ=255) ttCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACa > 2:797643/1‑131 (MQ=255) gTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGc < 2:243261/78‑1 (MQ=255) gTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGc > 1:243261/1‑78 (MQ=255) cGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAAt < 2:1535080/150‑1 (MQ=255) cGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCAGAACAGCACGACCCAGGCAAt < 1:44766/150‑1 (MQ=255) gAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAGACCCGCCCGGTCATCGACGACCGGGCAtt > 2:1622860/1‑71 (MQ=255) gAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAGACCCGCCCGGTCATCGACGACCGGGCAtt < 1:1622860/71‑1 (MQ=255) aCAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAgg < 2:349578/150‑1 (MQ=255) aGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGgc < 1:1444667/150‑1 (MQ=255) ttttACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGAcc > 1:1716370/1‑133 (MQ=255) ttttACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGAcc < 2:1716370/133‑1 (MQ=255) gtggtgATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGt > 1:329282/1‑150 (MQ=255) tggtgATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGtt < 2:1350027/150‑1 (MQ=255) tgATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCa > 1:1480315/1‑150 (MQ=255) aTGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAgg < 2:329282/150‑1 (MQ=255) gTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAg < 2:1347086/147‑1 (MQ=255) gTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAg > 1:1347086/1‑147 (MQ=255) tGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGACGTGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGGGCaa < 1:622307/150‑1 (MQ=255) aaGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGTGCAAAgccgc > 2:1584391/1‑150 (MQ=255) gCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTCGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGGGCAAAGccgccg > 1:1601704/1‑150 (MQ=255) aGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTc > 1:1350411/1‑42 (MQ=255) aGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTc < 2:1350411/42‑1 (MQ=255) aaaCCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGGGCAAAGCCGCCGGCCAggg > 1:1301031/1‑150 (MQ=255) aCCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGc < 2:1582062/75‑1 (MQ=255) aCCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGc > 1:1582062/1‑75 (MQ=255) gcccgGTCGTCGATGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGGGCAAAGCCGCCGGCCAGGGCAATGa > 1:919048/1‑150 (MQ=255) gcccgGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGttt > 2:468385/1‑121 (MQ=255) gcccgGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGttt < 1:468385/121‑1 (MQ=255) cccgGTCGTCGATGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGGGCAAAGCCGCCGGCCAGGGCAATGAt > 2:20924/1‑150 (MQ=255) ccgGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGaa > 2:956562/1‑83 (MQ=255) ccgGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGaa < 1:956562/83‑1 (MQ=255) cgGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGACAGGCCGGAAGACCCGTGCAATGAAGGGCAGCATCAGTTTCAGGGCAAAGCCGCCGGCCAGGGCAATGATcg > 1:1491593/1‑150 (MQ=255) cgtCGATGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGCAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGGGCAAAGCCGCCGGCCAGGGCAATGATCGCGAt < 1:20924/148‑1 (MQ=255) cATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGGGCAAAGCCGCCGGCCAGGGCAATGATCGCGAt < 1:1049424/150‑1 (MQ=255) aTCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGGGCAAAGCCGCCGGCCAGGGCAATGATCGCGATg > 1:1354624/1‑150 (MQ=255) gacgacCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGc > 2:1270280/1‑89 (MQ=255) gacgacCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGc < 1:1270280/89‑1 (MQ=255) gacgacCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGGGCAAAGCCGCCGGCCAGGGCAATGATCGCGATGaaa < 2:260458/150‑1 (MQ=255) gacgacCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGGGCAAAGCCGCCGGCCAGGGCAATGATCGCGATGaaa > 1:260458/1‑150 (MQ=255) acgacCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGGGCAAAGCCGCCGGCCAGGGCAATGATCGCGATGAAAt < 2:1601704/150‑1 (MQ=255) | GCTCACCAGGCGCATCTGGCGAAAACCGGTCTGCTTGAAATCTTCCATGGCTGCGCGCGCAAAGTGCGCTTCGCGGTTGGAGTGCGAAAACAGTTTTACCGTGGTGATGTTGGTGTAAGCGTCAGAAACCCGCCCGGTCATCGACGACCGGGCATTGGCCTGCTCCTGCCCGACCTTGCCCAGCCGGGGGACGAAATACAGCATGGCCAAGCCGAACAGCACGACCCAGGCAATGAAGGGCAGCATCAGTTTCAGGGCAAAGCCGCCGGCCAGGGCAATGATCGCGATGAAAT > NC_002947/3008217‑3008509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |