Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,166,396 C→T 5.3% A262V (GCC→GTC)  PP_2780 → 3‑oxoacyl‑ACP synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,166,3960CT 5.3% 276.5 / 4.0 95A262V (GCC→GTC) PP_27803‑oxoacyl‑ACP synthase
Reads supporting (aligned to +/- strand):  ref base C (48/41);  new base T (2/3);  total (50/45)
Fisher's exact test for biased strand distribution p-value = 6.62e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.91e-01

GACCGCGCTGTATCTGCTCGGCGCCGCCAGCAGCGAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGT  >  NC_002947/3166250‑3166543
                                                                                                                                                  |                                                                                                                                                   
gACCGCGCTGTATCTGCTCGGCGCCGCCAGCAGCGAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGTGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCg                                                                                                                                                  >  2:690456/1‑150 (MQ=255)
  ccGCGCTGTATCTGCTCGGCGCCGCCAGCAGCGAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAg                                                                                                                                                <  1:416712/150‑1 (MQ=255)
  ccGCGCTGTATCTGCTCGGCGCCGCCAGCAGCGAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAg                                                                                                                                                <  2:1241110/150‑1 (MQ=255)
   cgcgCTGTATCTGCTCGGCGCCGCCAGCAGCGAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGAGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAgg                                                                                                                                               >  1:683113/1‑150 (MQ=255)
      gcTGTATCTGCTCGGCGCCGCCAGCAGCGAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGc                                                                                                                                            >  2:414469/1‑150 (MQ=255)
            tCTGCTCGGCGCCGCCAGCAGCGAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGcc                                                                                                                                      >  2:213056/1‑150 (MQ=255)
              tGCTCGGCGCCGCCAGCAGCGAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGt                                                                                                                                    >  2:1397186/1‑150 (MQ=255)
                 tCGGCGCCGCCAGCAGCGAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACg                                                                                                                                 >  1:1774978/1‑150 (MQ=255)
                         gccAGCAGCGAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGCCGTCGAAGATCACTTCTTACGCGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTg                                                                                                                         >  2:50349/1‑150 (MQ=255)
                           cagcagCGAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCt                                                                                                                       >  1:847071/1‑150 (MQ=255)
                             gcagcGAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTgg                                                                                                                     <  1:522445/150‑1 (MQ=255)
                                  gAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTc                                                                                                                <  1:414469/150‑1 (MQ=255)
                                  gAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTc                                                                                                                <  1:513577/150‑1 (MQ=255)
                                    actgCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGACATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGGGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCgg                                                                                                              <  2:549390/147‑1 (MQ=255)
                                    aCAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCgg                                                                                                              <  1:296336/150‑1 (MQ=255)
                                              ggCAACGAACTGTGTCGGCCGTTCGAACGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTCGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTg                                                                                                    <  1:820741/150‑1 (MQ=255)
                                                   cGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGgcagca                                                                                                         <  1:861190/140‑1 (MQ=255)
                                                   cGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGgcagca                                                                                                         >  2:861190/1‑140 (MQ=255)
                                                     aaCTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAgggg                                                                                                                                             >  1:1664557/1‑102 (MQ=255)
                                                     aaCTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAgggg                                                                                                                                             <  2:1664557/102‑1 (MQ=255)
                                                     aaCTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCt                                                                                             <  1:984566/150‑1 (MQ=255)
                                                       cTGTGTCGTCCGTTCGATCGCCATCGCAGTCGCTTGATTGCGGTTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACCGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGTAGCCTGGATGCCTAc                                                                                           <  2:822107/150‑1 (MQ=255)
                                                       cTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCt                                                                                             >  1:1879273/1‑148 (MQ=255)
                                                       cTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCt                                                                                             <  2:1879273/148‑1 (MQ=255)
                                                          tgtCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACaaa                                                                                        >  2:686653/1‑150 (MQ=255)
                                                            tCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCCCGACCGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAGGGGCTGGGGTTCCGCAGCAGCCTGGCTGCCTGCacagt                                                                                      >  2:730552/1‑146 (MQ=255)
                                                               gCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCAc                                                                                   >  1:205738/1‑150 (MQ=255)
                                                                  gTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGc                                                                                >  1:1550091/1‑150 (MQ=255)
                                                                    tCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAATGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCac                                                                              <  2:1872801/150‑1 (MQ=255)
                                                                      gATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACaaaa                                                                                       <  2:1716524/139‑1 (MQ=255)
                                                                      gATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACaaaa                                                                                       >  1:1716524/1‑139 (MQ=255)
                                                                      gATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCaccc                                                                            >  2:1917321/1‑150 (MQ=255)
                                                                          gCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTTGTTTTGTCGTGCTGGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCCACGCCGTACGCCGAAGTGCTGGGTTTCGTCAGCAGCCTGGATGCCTACAAAATCACCGCacccgccc                                                                        >  2:726702/1‑150 (MQ=255)
                                                                           ccATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTg                                                                                                    <  1:207243/121‑1 (MQ=255)
                                                                           ccATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTg                                                                                                    >  2:207243/1‑121 (MQ=255)
                                                                           ccATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCacccgaccc                                                                       >  2:711945/1‑150 (MQ=255)
                                                                            cATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGgc                                                                                                             >  1:182859/1‑111 (MQ=255)
                                                                            cATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGgc                                                                                                             <  2:182859/111‑1 (MQ=255)
                                                                            cATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCAGAAGTGCTTGGGTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCacccgacccg                                                                      >  1:1490825/1‑150 (MQ=255)
                                                                             aTCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGc                                                                     >  1:1247548/1‑150 (MQ=255)
                                                                                gCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAg                                                                                                                           <  2:1734281/93‑1 (MQ=255)
                                                                                gCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAg                                                                                                                           >  1:1734281/1‑93 (MQ=255)
                                                                                 cAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGAGTGGATGCCTACAAAATCACCGCACCCGACCCGCAggg                                                                 >  1:1070660/1‑150 (MQ=255)
                                                                                    tGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCg                                                              >  1:1167870/1‑150 (MQ=255)
                                                                                      gCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCggg                                                            >  2:1325498/1‑150 (MQ=255)
                                                                                        tttaTTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGgc                                                          >  2:1130031/4‑150 (MQ=255)
                                                                                        ttGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCTCTCGCCCGAGGGGCAACGCCGTACTCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGAAGACTGCAAAATCACCGCACCCGACCCGCAGGTCCGGGgc                                                          >  1:1884430/1‑150 (MQ=255)
                                                                                          gATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCgggtgcg                                                        <  1:686653/150‑5 (MQ=255)
                                                                                          gATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGgcgc                                                        <  1:1914867/150‑1 (MQ=255)
                                                                                          gATTGCGGGTGAGGGCGGTGGCTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCGGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGgcgc                                                        <  2:205738/150‑1 (MQ=255)
                                                                                           aTTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGcgcg                                                       >  2:1801671/1‑150 (MQ=255)
                                                                                           aTTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGcgcg                                                       <  1:16039/150‑1 (MQ=255)
                                                                                                 ggTTAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGc                                                                                               >  2:220171/1‑104 (MQ=255)
                                                                                                 ggTTAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGc                                                                                               <  1:220171/104‑1 (MQ=255)
                                                                                                  gTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGCTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTgg                                                <  1:213056/150‑1 (MQ=255)
                                                                                                   tGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCgg                                                      >  2:140413/1‑143 (MQ=255)
                                                                                                   tGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCgg                                                      <  1:140413/143‑1 (MQ=255)
                                                                                                   tGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGc                                               >  2:376725/1‑150 (MQ=255)
                                                                                                     aGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGa                                             <  1:711945/150‑1 (MQ=255)
                                                                                                     aGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGACCGAGGGGCAACGCCGTACGCTGAAGTGCTTTGTTTCGGCAGCAGCCTGGATTCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGa                                             <  2:1188570/150‑1 (MQ=255)
                                                                                                       ggCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAggg                                                                                                                                              <  1:1727265/51‑1 (MQ=255)
                                                                                                       ggCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAggg                                                                                                                                              >  2:1727265/1‑51 (MQ=255)
                                                                                                        gCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGc                                          <  2:1167870/150‑1 (MQ=255)
                                                                                                         cGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTTGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCa                                         >  2:872438/1‑150 (MQ=255)
                                                                                                          ggtggtTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCAc                                                                                   <  2:1120298/107‑1 (MQ=255)
                                                                                                          ggtggtTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCAc                                                                                   >  1:1120298/1‑107 (MQ=255)
                                                                                                          ggtggtTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCAGAGGGGCGCAGAGGAGCTCCCAAGTGCGGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAg                                        <  1:717103/150‑1 (MQ=255)
                                                                                                              gtTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAggcgg                                    >  2:522763/1‑150 (MQ=255)
                                                                                                              gtTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAggcgg                                    <  1:690456/150‑1 (MQ=255)
                                                                                                                   gTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGttt                                                                                                                 >  2:676878/1‑68 (MQ=255)
                                                                                                                   gTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGttt                                                                                                                 <  1:676878/68‑1 (MQ=255)
                                                                                                                    tCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGTTCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGa                              >  1:418646/1‑150 (MQ=255)
                                                                                                                    tCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGa                              >  2:582699/1‑150 (MQ=255)
                                                                                                                     cGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGAc                             <  2:1550091/150‑1 (MQ=255)
                                                                                                                      gTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACg                            >  1:631644/1‑150 (MQ=255)
                                                                                                                          cgttgcCCCTCGGGCGAGCGCCCGTTCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCaccc                                                                            <  2:755712‑M1/92‑1 (MQ=255)
                                                                                                                          cgttgcCCCTCGGGCGAGCGCCCGTTCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCaccc                                                                            >  1:755712‑M1/7‑98 (MQ=255)
                                                                                                                           gttgcCCCTCGGGCGAGCGCCCGTTCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCgg                                                             >  2:306591‑M1/6‑112 (MQ=255)
                                                                                                                           gttgcCCCTCGGGCGAGCGCCCGTTCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCgg                                                             <  1:306591‑M1/107‑1 (MQ=255)
                                                                                                                            gAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGcc                      >  2:1173408/1‑150 (MQ=255)
                                                                                                                            gAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGcc                      >  1:1168182/1‑150 (MQ=255)
                                                                                                                            gAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGcc                      >  2:792005/1‑150 (MQ=255)
                                                                                                                             aaaCCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGCCg                     >  2:634396/1‑150 (MQ=255)
                                                                                                                                   TCGAACGGGCGCTCGTCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGCCGGGCTgg               <  2:842717‑M1/150‑1 (MQ=255)
                                                                                                                                   TCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGCCGGGCTgg               <  1:1678326‑M1/150‑1 (MQ=255)
                                                                                                                                   TCGAACGGGCGCTCGCCCGAGAGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGCCGGGCTgg               <  2:150035‑M1/150‑1 (MQ=255)
                                                                                                                                         gggCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGCCGGGCTGGcgccgc         <  1:1173408/150‑1 (MQ=255)
                                                                                                                                          ggCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCg                                                                                                               <  2:690051/47‑1 (MQ=255)
                                                                                                                                          ggCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCg                                                                                                               >  1:690051/1‑47 (MQ=255)
                                                                                                                                             gcTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCa                                         <  1:4847/114‑1 (MQ=255)
                                                                                                                                             gcTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCa                                         >  2:4847/1‑114 (MQ=255)
                                                                                                                                               tCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGc                                          <  2:1650785/111‑1 (MQ=255)
                                                                                                                                               tCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGc                                          >  1:1650785/1‑111 (MQ=255)
                                                                                                                                                cGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGt  <  1:1917321/150‑1 (MQ=255)
                                                                                                                                                cGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGt  <  2:1678326/150‑1 (MQ=255)
                                                                                                                                                  cccGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGCCGGGCTgg               >  1:661751/1‑135 (MQ=255)
                                                                                                                                                  cccGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGCCGGGCTgg               <  2:661751/135‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
GACCGCGCTGTATCTGCTCGGCGCCGCCAGCAGCGAACAGCGTTGGGGCACCGAACTGTGTCGGCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGGCGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGT  >  NC_002947/3166250‑3166543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑