| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,212,319 | T→C | 5.1% | *189W (TGA→TGG) ‡ | PP_2816 ← | transcriptional regulator NfxB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,212,319 | 0 | T | C | 5.1% | 235.7 / 2.1 | 78 | *189W (TGA→TGG) ‡ | PP_2816 | transcriptional regulator NfxB |
| Reads supporting (aligned to +/- strand): ref base T (35/39); new base C (2/2); total (37/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.64e-01 | |||||||||||
TCCCGCTTGCCGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAACGCCGCGGTGA > NC_002947/3212175‑3212464 | tCCCGCTTGCCGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTGCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATa < 2:171890/150‑1 (MQ=255) ttGCCGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATa < 2:153309/144‑1 (MQ=255) ttGCCGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATa > 1:153309/1‑144 (MQ=255) ccGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGgcgc > 2:1711627/1‑147 (MQ=255) ccGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGgcgc < 1:1711627/147‑1 (MQ=255) cGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCcgc > 2:90160/1‑150 (MQ=255) ccATCGCATCCCGATCGACGCTGACCTTAGTCAGGTGATCTTGAGCACGCCGCGCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTg < 2:211889/150‑1 (MQ=255) cATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGgc > 2:1719735/1‑140 (MQ=255) cATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGgc < 1:1719735/140‑1 (MQ=255) cATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTACG‑CGGGCGCCCTATTGAGCGCCcgcgcag < 2:754706/150‑4 (MQ=255) gCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAAt > 1:1620854/1‑150 (MQ=255) aTCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTACG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGc < 1:1910681/150‑1 (MQ=255) ccAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCATTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGccc > 2:195924/1‑150 (MQ=255) ccgcTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGaaa < 1:703380/150‑1 (MQ=255) cccTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGct > 1:477339/1‑150 (MQ=255) ccTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGctc > 2:1931202/1‑150 (MQ=255) ccTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGctc > 1:1595942/1‑150 (MQ=255) cTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGctct > 2:1303718/1‑150 (MQ=255) tGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGTACACCAC‑GCTGCTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCAc > 2:156012/1‑150 (MQ=255) gATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGtt < 2:1447412/150‑1 (MQ=255) aTCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATg > 2:306468/1‑119 (MQ=255) aTCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATg < 1:306468/119‑1 (MQ=255) aTCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTg < 1:548826/150‑1 (MQ=255) ggAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGcaca > 1:114836/1‑150 (MQ=255) ggAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGcaca > 1:701742/1‑150 (MQ=255) gccgcTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCtt > 1:1512906/1‑150 (MQ=255) ccgcTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTg < 2:1620854/150‑1 (MQ=255) ccgcTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTg < 2:323550/150‑1 (MQ=255) cTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGcc < 1:1291105/106‑1 (MQ=255) cTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGcc > 2:1291105/1‑106 (MQ=255) tCGATGAAGCCGAGCAATCGAGTTCATTTCCAGCCTCTGACCCAATAGGT‑CTGCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGgcgc < 2:701742/150‑1 (MQ=255) gATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGgcgcgc < 2:114836/150‑1 (MQ=255) gACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGcc > 1:143523/1‑150 (MQ=255) gCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGccccc < 1:740220/150‑1 (MQ=255) gCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGccccc > 2:1057547/1‑150 (MQ=255) gCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTgg < 1:1303718/150‑1 (MQ=255) aaTAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTggcg < 1:405263/150‑1 (MQ=255) aaTAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTggcg < 2:546274/150‑1 (MQ=255) aaTAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCAAGGC‑CATGCGCTGAGCCTTGTGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTggcg < 2:1506763/150‑1 (MQ=255) tAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGtt > 1:1016038/1‑144 (MQ=255) tAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGtt < 2:1016038/144‑1 (MQ=255) tAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTggcggg > 2:949820/1‑150 (MQ=255) tCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGa < 1:196495/150‑1 (MQ=255) ccttccttTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGAccatgc > 1:871821/1‑150 (MQ=255) cttccttTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACActc > 1:1526682/1‑111 (MQ=255) cttccttTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACActc < 2:1526682/111‑1 (MQ=255) tccttTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGAccatgccat < 2:1512906/150‑1 (MQ=255) ccttTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGAccatgccatg < 1:90160/150‑1 (MQ=255) cttTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACcatgccatgc > 2:137315/1‑150 (MQ=255) tttGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCa > 1:1751002/1‑150 (MQ=255) ttGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCGGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCaa < 2:352865/150‑1 (MQ=255) gACGCAATAGGT‑CTTCACGGCTGTTGCCCTACG‑CGGGCGCCCTATTGAGCGCCcgcgca < 2:1721969/59‑3 (MQ=9) gACGCAATAGGT‑CTTCACGGCTGTTGCCCTACG‑CGGGCGCCCTATTGAGCGCCcgcgca > 1:1721969/1‑57 (MQ=9) aCGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAg < 2:871821/150‑1 (MQ=255) gCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCg > 1:978926/1‑150 (MQ=255) aTAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATa > 1:1286081/1‑150 (MQ=255) gT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGGGCCTTCCATGCCATGCAACAGCGATACGaa < 1:50705/150‑1 (MQ=255) gT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGaa < 1:731553/150‑1 (MQ=255) gT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCGCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGaa < 2:143523/150‑1 (MQ=255) t‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAAc < 2:978926/150‑1 (MQ=255) t‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAAc > 1:380089/1‑150 (MQ=255) ttCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTgg > 2:1828659/1‑112 (MQ=255) ttCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTgg < 1:1828659/112‑1 (MQ=255) ttCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACAt > 2:535855/1‑150 (MQ=255) aCGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGa < 1:810172/138‑1 (MQ=255) aCGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGa > 2:810172/1‑138 (MQ=255) cGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCg < 2:1286081/150‑1 (MQ=255) ggCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCgg > 2:262000/1‑150 (MQ=255) ggCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCgg > 1:1638855/1‑150 (MQ=255) gCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCACCAGCGATACGAACATCTCGGt < 1:156012/150‑1 (MQ=255) tGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCa < 2:1595942/150‑1 (MQ=255) gTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAg > 2:655508/1‑150 (MQ=255) ccTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGGACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGGCAGCAAcg > 2:556843/1‑150 (MQ=255) tGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTggcgggc < 1:1053910/101‑1 (MQ=255) tGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTggcgggc > 2:1053910/1‑101 (MQ=255) cacg‑cgGGCGCCCTATTGAGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAAcgcc > 2:1750380/3‑150 (MQ=255) g‑cgGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGTGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAACGCcgcg < 1:1931202/150‑1 (MQ=255) gcgcTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAACGCCGCGGTGa < 2:1638855/150‑1 (MQ=255) | TCCCGCTTGCCGACCATCGCATCCAGATCGCCGCTGCCCTTGAGCTGGTGATCTGGAGCACGCCGCTCGATGACGCCGAGCAATAGCGTTCATTCCCTTCCTTTGACGCAATAGGT‑CTTCACGGCTGTTGCCCTGCG‑CGGGCGCTCAATAGGGCGCCCGCGTGGCAATGCCCTGTAGAAACGCGCTCTCCAGCACCGTTGCACACTCTCTTGGCGCGCGCCCCCGTTGGCGGGCGTCGACCATGCCATGCAACAGCGATACGAACATCTCGGTCAGCAACGCCGCGGTGA > NC_002947/3212175‑3212464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |