BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,227,837	C→G	7.4%	S211R (AGC→AGG)	PP_2828 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,227,837	0	C	G	7.4%	333.5 / 16.1	108	S211R (AGC→AGG)	PP_2828	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (49/51); new base G (4/4); total (53/55)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.84e-01

Only 100 of 110 total aligned reads displayed.

GCCGGAAGCCCTGCTGGGTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGGCGCCGTACCGGAGCGTGC  >  NC_002947/3227690‑3227983

gCCGGAAGCCCTGCTGGGTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCt                                                                                                                                                    >  1:266894/1‑150 (MQ=255)

   ggAAGCCCTGCTGGGTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCATgcg                                                                                                                                                 >  2:1077565/1‑150 (MQ=255)

        cccTGCTGGGTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCAGGCGCAGGCTGCGCCggg                                                                                                                                            <  2:1133797/150‑1 (MQ=255)

         ccTGCTGGGTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGGCt                                                                                                                                                    <  2:1292188/141‑1 (MQ=255)

         ccTGCTGGGTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGc                                                                                                                                           >  2:1463412/1‑150 (MQ=255)

           tgctgGGTTGCCGCCTGTACCTGTAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCg                                                                                                                                         >  2:1034003/1‑150 (MQ=255)

           tgctgGGTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCg                                                                                                                                         >  2:232434/1‑150 (MQ=255)

           tgctgGGTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCg                                                                                                                                         >  1:903781/1‑150 (MQ=255)

           tgctgGGTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCg                                                                                                                                         >  1:1510014/1‑150 (MQ=255)

              tgGGTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑g                                                                                                                                     >  1:217196/1‑150 (MQ=255)

               gggTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTgcgc                                                                                                                                                >  2:1066809/1‑139 (MQ=255)

               gggTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTgcgc                                                                                                                                                <  1:1066809/139‑1 (MQ=255)

               gggTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑Gt                                                                                                                                    >  1:976876/1‑150 (MQ=255)

               gggTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑Gt                                                                                                                                    <  2:753951/150‑1 (MQ=255)

                  ttGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCa                                                                                                                                >  1:597303/1‑150 (MQ=255)

                   tGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCAt                                                                                                                               <  2:554430/150‑1 (MQ=255)

                            tACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCAt                                                                                                                      >  1:1536407/1‑150 (MQ=255)

                               cTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCa                                                                                                                   <  2:1903651/150‑1 (MQ=255)

                               cTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCa                                                                                                                   >  1:1903651/1‑150 (MQ=255)

                                  gAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTg                                                                                                                <  2:597303/150‑1 (MQ=255)

                                  gAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTg                                                                                                                >  2:1751227/1‑150 (MQ=255)

                                   aGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGc                                                                                                               <  2:2105/150‑1 (MQ=255)

                                       ggcgggcgCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCa                                                                                                           <  1:1038192/150‑1 (MQ=255)

                                        gcgggcgCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAg                                                                                                          >  1:1350770/1‑150 (MQ=255)

                                         cgggcgCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTTGCGTGGGCCCGGCGCAGCCTTCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGt                                                                                                         <  1:899341/150‑1 (MQ=255)

                                         cgggcgCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCTGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGt                                                                                                         <  1:193852/150‑1 (MQ=255)

                                           ggcgCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGc                                                                                                       <  2:376469/150‑1 (MQ=255)

                                             cgcCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGcccc                                                                                                                          >  2:335959/1‑129 (MQ=255)

                                             cgcCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGcccc                                                                                                                          <  1:335959/129‑1 (MQ=255)

                                                cGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCa                                                                                                              <  1:1488723/138‑1 (MQ=255)

                                                cGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCa                                                                                                              >  2:1488723/1‑138 (MQ=255)

                                                cGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTggc                                                                                                  >  1:1427571/1‑150 (MQ=255)

                                                     ttCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCCTGCAGTGCACCACTCCCTGGCGgcgc                                                                                             >  2:1380530/1‑150 (MQ=255)

                                                      tCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCt                                                                                            <  1:896495/150‑1 (MQ=255)

                                                      tCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCt                                                                                            <  1:483451/150‑1 (MQ=255)

                                                        aGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGGCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTgg                                                                                          <  2:616319/150‑1 (MQ=255)

                                                         ggCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGc                                                                                         >  1:471722/1‑150 (MQ=255)

                                                           cGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGccc                                                                                       <  2:429470/150‑1 (MQ=255)

                                                             ttGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCaa                                                                                     <  2:122895/150‑1 (MQ=255)

                                                              tGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAg                                                                                    <  2:399213/150‑1 (MQ=255)

                                                              tGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAg                                                                                    <  1:1114814/150‑1 (MQ=255)

                                                                caggcagCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGcc                                                                                                                                          <  1:264185/96‑1 (MQ=255)

                                                                caggcagCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGcc                                                                                                                                          >  2:264185/1‑96 (MQ=255)

                                                                caggcagCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAggg                                                                                  <  2:1536407/150‑1 (MQ=255)

                                                                  ggcagCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑Gt                                                                                                                                    >  1:1698733/1‑99 (MQ=255)

                                                                   gcagCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCAGGCGCAGGCTGCGccgg                                                                                                                                             >  2:1632154/1‑88 (MQ=255)

                                                                   gcagCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCAGGCGCAGGCTGCGccgg                                                                                                                                             <  1:1632154/90‑3 (MQ=255)

                                                                    cagCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGAAAAGAATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGa                                                                              <  2:1827403/150‑1 (MQ=255)

                                                                         gTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGa                                                                         <  1:1905971/150‑1 (MQ=255)

                                                                          tGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCACGCCCTGAGCCGAt                                                                        >  2:629827/1‑150 (MQ=255)

                                                                           gCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGAtt                                                                       <  2:217196/150‑1 (MQ=255)

                                                                           gCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCAGGCGCAGGCTGCGCCGGGccc                                                                                                                                         <  2:1025040/86‑2 (MQ=38)

                                                                           gCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCAGGCGCAGGCTGCGCCGGGccc                                                                                                                                         >  1:1025040/1‑85 (MQ=38)

                                                                              tCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCa                                                                    >  2:623189/1‑150 (MQ=255)

                                                                                ctaaTGCGTTGGTCACCGCCATGCCCGGGCCCCGGCGGCGCCGATACCTGGCGTGCGCCCGGCGCAGCTTGCGCCAGTCCTGC‑GT‑GGATGCCTGGCATGCTGTTTACGAGTGCCTGGCGGCGCTGGACCCAGGGCTGGGCCGATTGCCCg                                                                  <  2:811967/147‑1 (MQ=255)

                                                                                ccGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACg                                                                  >  1:1647632/1‑150 (MQ=255)

                                                                                 cGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACgg                                                                 >  2:163556/1‑150 (MQ=255)

                                                                                   aTGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTg                                                               <  2:1647632/150‑1 (MQ=255)

                                                                                    tGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGc                                                              >  1:1761898/1‑150 (MQ=255)

                                                                                       gTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTg                                                                                                    <  2:1286917/109‑1 (MQ=255)

                                                                                       gTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTg                                                                                                    >  1:1286917/1‑109 (MQ=255)

                                                                                        ttGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGtt                                                          >  2:443586/1‑150 (MQ=255)

                                                                                        ttGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGtt                                                          <  1:232434/150‑1 (MQ=255)

                                                                                        ttGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑CCATGCCCCGCATGCAGTGCACCAGTCCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGtt                                                          <  2:774972/150‑1 (MQ=255)

                                                                                         tGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTg                                                         <  1:1034003/150‑1 (MQ=255)

                                                                                            tCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTgggg                                                      >  1:995869/1‑150 (MQ=255)

                                                                                            tCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCACAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTgggg                                                      <  1:979254/150‑1 (MQ=255)

                                                                                                  ccATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCAc                                                >  2:297802/1‑150 (MQ=255)

                                                                                                       cccGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTg                                                               <  2:116592/130‑1 (MQ=255)

                                                                                                       cccGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTg                                                               >  1:116592/1‑130 (MQ=255)

                                                                                                       cccGGGCTCCAGCGGCGCCGATACCGGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGggt                                           <  2:352316/150‑1 (MQ=255)

                                                                                                        ccGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTg                                                               >  2:410804/1‑129 (MQ=255)

                                                                                                        ccGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTg                                                               <  1:410804/129‑1 (MQ=255)

                                                                                                        ccGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGggtg                                          <  1:2108/150‑1 (MQ=255)

                                                                                                        ccGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCAAGGTGCTGTTGGGGGCGCACCGggtg                                          <  1:1514879/150‑1 (MQ=255)

                                                                                                        ccGGGCTCCAGAGGCGCTGATACCTGGCGTGGGCCCGGCGCAGCCTGCGACCGGGTTTCTGTATCTTGGGCCGCTT‑‑TGTGCACCAGTGGCGGGCCGCGATGGACCAAGGCCTGCGCCATTTTCACTGTGCTGTTGGGGGCGCACCGggtg                                          <  1:443586/150‑1 (MQ=255)

                                                                                                          gggCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGggtggt                                        <  1:1898024/150‑1 (MQ=255)

                                                                                                              tCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGc                                    >  2:1692028/1‑150 (MQ=255)

                                                                                                               ccAGCGGCGCCGAGACCTGGCGTGGGCCCGGCGCAGCCTGGGCCTGGCCGGC‑GG‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCa                                   <  2:473117/150‑1 (MQ=255)

                                                                                                                 aGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTg                                                                                           <  2:564220/92‑1 (MQ=255)

                                                                                                                       gcCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGa                                <  1:311178/145‑1 (MQ=255)

                                                                                                                       gcCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGa                                >  2:311178/1‑145 (MQ=255)

                                                                                                                         cGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGtt                         <  2:1510014/150‑1 (MQ=255)

                                                                                                                          gATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTc                        >  1:498011/1‑150 (MQ=255)

                                                                                                                             cccTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAg                     <  2:1350770/149‑1 (MQ=255)

                                                                                                                              ccTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAgg                    >  2:1206709/1‑150 (MQ=255)

                                                                                                                               cTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGgc                   >  1:1817310/1‑150 (MQ=255)

                                                                                                                               cTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGgc                   >  1:1694371/1‑150 (MQ=255)

                                                                                                                                tGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGgcg                  >  2:1550856/1‑150 (MQ=255)

                                                                                                                                  acgccggCCAGGCGCAGGCTGCGCCGGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGGCGcc                >  1:1551305/6‑150 (MQ=255)

                                                                                                                                        gCCCGGCGCAGCCTGCGCCTGGCCTGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGGCGCCGTACCg          >  2:601428/1‑150 (MQ=255)

                                                                                                                                         ccaggCGCAGGCTGCGCCGGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGGCGCCGTACCgg         >  1:474604/4‑150 (MQ=255)

                                                                                                                                          ccGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGGCGCCGTACCGGa        >  1:845083/1‑150 (MQ=255)

                                                                                                                                          ccGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGGCGCCGTACCGGa        >  1:1145790/1‑150 (MQ=255)

                                                                                                                                            ggCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGGCGCCGTACCGGAGc      >  2:181878/1‑150 (MQ=255)

                                                                                                                                            ggCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGGCGCCGTACCGGAGc      <  2:1694371/150‑1 (MQ=255)

                                                                                                                                               gcAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGGCGCCGTACCGGAGCGTg   >  2:1713862/1‑150 (MQ=255)

                                                                                                                                                cAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGGCGCCGTACCGGAGCGTgc  <  1:1713862/150‑1 (MQ=255)

                                                                                                                                                   ccTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGggtggt                                        <  1:1863459/109‑1 (MQ=255)

                                                                                                                                                   ccTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGggtggt                                        >  2:1863459/1‑109 (MQ=255)

GCCGGAAGCCCTGCTGGGTTGCCGCCTGTACCTGGAGCTGGCGGGCGCCGTGGTTCAGGCGTTGCAGGCAGCGGTGCCTCCCGATGCGTTGGTCACCGCCATGCCCGGGCTCCAGCGGCGCCGATACCTGGCGTGGGCCCGGCGCAGCCTGCGCCTGGCCGGC‑GT‑GCATGCCCCGCATGCAGTGCACCAGTGCCTGGCGGCGCTGGCCCAAGGGCTGAGCCGATTGCACGGTGCTGTTGGGGGCGCACCGGGTGGTCAGCACGAGCCGGTTCCAGGCGCCGTACCGGAGCGTGC  >  NC_002947/3227690‑3227983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`