Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,359,986 A→C 6.1% C442G (TGC→GGC)  PP_2956 ← ribosomal protein S6 modification protein‑like protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,359,9860AC 6.1% 278.0 / 7.9 98C442G (TGC→GGC) PP_2956ribosomal protein S6 modification protein‑like protein
Reads supporting (aligned to +/- strand):  ref base A (43/49);  new base C (3/3);  total (46/52)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01

Only 100 of 101 total aligned reads displayed.

TTGGGGTTGTCGTTGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTGG  >  NC_002947/3359838‑3360128
                                                                                                                                                    |                                                                                                                                              
ttGGGGTTGTCGTTGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGcac                                                                                                                                               <  1:1352917/150‑1 (MQ=255)
     gTTGTCGTTGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGcc                                                                                                                                          >  2:240504/1‑150 (MQ=255)
        gTCGTGGACTTCGATCACCAGGACCCGCTGGCCAGTGTGGTGGAGGTCCACCCCGTACGGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGtt                                                                                                                                       <  2:646303/150‑1 (MQ=255)
         tCGTTGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTg                                                                                                                                      >  1:534351/1‑150 (MQ=255)
          cGTTGACTTCGATCACCAGTACACGGTCGTCGGTCTGCTTCAGCTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGa                                                                                                                                     <  2:376827/150‑1 (MQ=255)
            ttGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACt                                                                                                                                   >  1:1818585/1‑150 (MQ=255)
               aCTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCACGGCACAGGCAGTTGAGTTcc                                                                                                                                >  2:402076/1‑149 (MQ=255)
                 ttCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGcc                                                                                                                              >  2:1162642/1‑150 (MQ=255)
                   cGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCgg                                                                                                                            <  1:1715803/150‑1 (MQ=255)
                    gATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGc                                                                                                                           >  2:1130981/1‑150 (MQ=255)
                     aTCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGcc                                                                                                                          >  1:1828721/1‑150 (MQ=255)
                     aTCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGcc                                                                                                                          >  1:1301042/1‑150 (MQ=255)
                      tCACCAGTACACGGTGGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCt                                                                                                                         <  1:402076/150‑1 (MQ=255)
                        aCCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTgg                                                                                                                       >  1:371548/1‑150 (MQ=255)
                        aCCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGCTGGACGCTTTTCAACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTgg                                                                                                                       <  2:759242/150‑1 (MQ=255)
                          ctggcccaggagtactgctacaccgaatacgactggtgtatcggcgtattcaagggtgaggcgttttacgcctgacagtacttcatgtccaagggccactggcaaatctacaaccacaaGGCACAGGCCGTTGACTTCGCCGGCCTGGGc                                                                                                                     >  1:622949‑M1/120‑150 (MQ=255)
                          ctggcccaggagtactgctacaccgaatacgactggcgtatcggcgtactcaacggtgaggcgctttacgcctgccagtacttcatgtccaagggccactggcaaatctacaaccacaaGGCACAGGCCGTTGACTTCGCCGGCCTGGGc                                                                                                                     >  1:617444‑M1/120‑150 (MQ=255)
                          cAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGcac                                                                                                                                               >  2:1157571/1‑124 (MQ=255)
                          cAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGcac                                                                                                                                               <  1:1157571/124‑1 (MQ=255)
                               cacGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtgt                                                                                                                <  2:236634/150‑1 (MQ=255)
                               cacGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtgt                                                                                                                <  1:1746577/150‑1 (MQ=255)
                                 cGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTgg                                                                                                              <  1:982828/150‑1 (MQ=255)
                                   ggcGCCGGTCGGGTCCAGTTCCACACCCTACGGCCGTTGCCCGAGCAGCCGGGCAGGCTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGGGCGGCACAGGCCGTGGACTTCGCCGGCCTGGGCCTTGTGGtt                                                                                                            <  2:748658/148‑1 (MQ=255)
                                   gTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGtt                                                                                                            <  1:1162642/150‑1 (MQ=255)
                                           tCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGAttt                                                                                                    <  1:1130981/150‑1 (MQ=255)
                                              gCTTCAGGTCCACACCGTACAGCCCTTNCCCGATGAGCCTNGCAGTGNCGACGGCCAGCTTTACGACTTCGGGTGGTGCCATATCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGcc                                                                                                 >  1:1575863/1‑150 (MQ=255)
                                               cTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCa                                                                                                <  2:575688/150‑1 (MQ=255)
                                                ttCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACtt                                                                                                                                  <  1:1361054/115‑1 (MQ=255)
                                                ttCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACtt                                                                                                                                  >  2:1361054/1‑115 (MQ=255)
                                                     gTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtg                                                                                                                 >  1:1224531/1‑127 (MQ=255)
                                                     gTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtg                                                                                                                 <  2:1224531/127‑1 (MQ=255)
                                                      tCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTgg                                                                                                              >  1:1839925/1‑129 (MQ=255)
                                                      tCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTgg                                                                                                              <  2:1839925/129‑1 (MQ=255)
                                                        cacaCCGTACAGCCCTTGCCCGATGATCCTGGCAGGGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCtt                                                                                       >  2:120793/1‑150 (MQ=255)
                                                        cacaCCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCtt                                                                                       >  1:1055511/1‑150 (MQ=255)
                                                        cacaCCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCtt                                                                                       <  2:1055511/150‑1 (MQ=255)
                                                          cacCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTgg                                                                                     >  1:10754/1‑150 (MQ=255)
                                                           acCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGa                                                                                    <  2:1433918/150‑1 (MQ=255)
                                                             cGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAg                                                                                               <  2:1571867/137‑1 (MQ=255)
                                                             cGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAg                                                                                               >  1:1571867/1‑137 (MQ=255)
                                                               tACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGTCCGATTTACGACGTCGGGTGTTGCCTGTTCCTGCGGGACCGGGCGGCACAGGCCGTTTAATTCGCCGGCCTGGGGCTTGTTGTGGTAGCTTTGCCAGTGGCCCTTTTACATg                                                                                >  1:295728/1‑150 (MQ=255)
                                                                 cAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGaa                                                                              <  2:1575863/150‑1 (MQ=255)
                                                                  aGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGt                                                                                              >  2:363273/1‑133 (MQ=255)
                                                                  aGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGt                                                                                              <  1:363273/133‑1 (MQ=255)
                                                                    cccTTGCCCGATGCGCCTGGCAGTGTCGCCGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTCCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGCCCTGAAgca                                                                           >  2:103260/1‑148 (MQ=255)
                                                                    cccTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtg                                                                                                                 <  1:396841/112‑1 (MQ=255)
                                                                    cccTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtg                                                                                                                 >  2:396841/1‑112 (MQ=255)
                                                                       ttGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTg                                                                        <  2:776392/150‑1 (MQ=255)
                                                                       ttGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTg                                                                        <  1:240504/150‑1 (MQ=255)
                                                                        tGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTgg                                                                       <  2:10754/150‑1 (MQ=255)
                                                                           tcaacggtgaggcgctttacgcctgccagtacttcatgtccaagggccactggcaaatctacaaccacaaGGCCCAGGCCGTTGACTTCGCCGGCCTg                                                                                                                        >  1:1216139‑M1/71‑98 (MQ=255)
                                                                           tcaacggtgaggcgctttacgcctgccagtacttcatgtccaagggccactggcaaatctacaaccacaaGGCCCAGGCCGTTGACTTCGCCGGCCTg                                                                                                                        <  2:1216139‑M1/28‑1 (MQ=255)
                                                                           ccGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTgg                                                                                                                       <  1:1513758/99‑1 (MQ=255)
                                                                           ccGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTgg                                                                                                                       >  2:1513758/1‑99 (MQ=255)
                                                                           ccGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAg                                                                    <  2:1693631/150‑1 (MQ=255)
                                                                            cGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAgg                                                                   >  1:773279/1‑150 (MQ=255)
                                                                             gATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGc                                                                  >  1:107502/1‑150 (MQ=255)
                                                                                    ttGGCAGTGTCGACGTCAAGCGTTACGACTCCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGACTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAgc                                                           <  2:295728/149‑1 (MQ=255)
                                                                                     tGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAgcg                                                          >  1:94724/1‑150 (MQ=255)
                                                                                      ggCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAgcgc                                                         <  2:1828721/150‑1 (MQ=255)
                                                                                               gACGGCCAGCTTTAAGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGtt                                                <  2:960240/150‑1 (MQ=255)
                                                                                                 cGGCCAGCTTGACGACTTCGGGTGGTGCCTGTGCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGa                                              <  2:696932/150‑1 (MQ=255)
                                                                                                    ccAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTg                                                                                             >  1:1458056/1‑100 (MQ=255)
                                                                                                    ccAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTg                                                                                             <  2:1458056/100‑1 (MQ=255)
                                                                                                      aGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCTGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCCCCGTTGAGTACg                                         >  2:689558/1‑150 (MQ=255)
                                                                                                          ttACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGa                                     >  1:905262/1‑150 (MQ=255)
                                                                                                          ttACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGa                                     >  1:377706/1‑150 (MQ=255)
                                                                                                              gACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACg                                 >  2:1736464/1‑150 (MQ=255)
                                                                                                               aCTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGc                                <  2:377706/150‑1 (MQ=255)
                                                                                                                cTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGc                                                                      <  2:423012/111‑1 (MQ=255)
                                                                                                                cTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGc                                                                      >  1:423012/1‑111 (MQ=255)
                                                                                                                 ttCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCa                              >  2:756694/1‑150 (MQ=255)
                                                                                                                 ttCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCa                              >  1:1713673/1‑150 (MQ=255)
                                                                                                                            ccTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtgtg                                                                                                               <  2:70069/58‑1 (MQ=255)
                                                                                                                            ccTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTtgtg                                                                                                               >  1:70069/1‑58 (MQ=255)
                                                                                                                            ccTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTg                                                                        >  2:1547282/1‑97 (MQ=255)
                                                                                                                            ccTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTg                                                                        <  1:1547282/97‑1 (MQ=255)
                                                                                                                            ccTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTCGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCgg                   <  2:1301042/150‑1 (MQ=255)
                                                                                                                              tGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGgtg                 <  2:534351/150‑1 (MQ=255)
                                                                                                                              tGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGgtg                 <  2:107502/150‑1 (MQ=255)
                                                                                                                                ttCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCTGTGGCCCTTGGTCATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCAAGTCGTATTCGgtgga               <  2:1148190/150‑3 (MQ=255)
                                                                                                                                  ccACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGc             >  1:1632680/1‑150 (MQ=255)
                                                                                                                                   cACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCa            <  1:103260/150‑1 (MQ=255)
                                                                                                                                       acaaccacaaGGCCCAGGCCGGCGAAGTCAACGGCCTGTGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGgtg                 <  1:1355272‑M1/131‑1 (MQ=255)
                                                                                                                                       acaaccacaaGGCCCAGGCCGGCGAAGTCAACGGCCTGTGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGgtg                 >  2:1355272‑M1/11‑141 (MQ=255)
                                                                                                                                          accacaaGGCCCAGGCCGGCGAAGTCAACGGCCTGTGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGt                                            >  1:659031‑M1/8‑111 (MQ=255)
                                                                                                                                          accacaaGGCCCAGGCCGGCGAAGTCAACGGCCTGTGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGt                                            <  2:659031‑M1/104‑1 (MQ=255)
                                                                                                                                          aCCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTgg                                                                       >  2:285139/1‑84 (MQ=255)
                                                                                                                                          aCCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTgg                                                                       <  1:285139/84‑1 (MQ=255)
                                                                                                                                          aCCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTcc     <  2:1818585/150‑1 (MQ=255)
                                                                                                                                            cgcgcgGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTg   >  1:866976/1‑150 (MQ=255)
                                                                                                                                             gcgcgGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTAc                                                                          >  2:150051/1‑78 (MQ=255)
                                                                                                                                             gcgcgGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTAc                                                                          <  1:150051/78‑1 (MQ=255)
                                                                                                                                             gcgcgGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAg                                             >  1:499531/1‑107 (MQ=255)
                                                                                                                                             gcgcgGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAg                                             <  2:499531/107‑1 (MQ=255)
                                                                                                                                             gcgcgGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTgg  <  2:1713673/150‑1 (MQ=255)
                                                                                                                                             gcgcgGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTgg  <  1:1736464/150‑1 (MQ=255)
                                                                                                                                             gcgcgGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGGTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCCCCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTgg  <  2:200746/150‑1 (MQ=255)
                                                                                                                                                   CACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGc                                <  1:760606‑M1/114‑1 (MQ=255)
                                                                                                                                                   CACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGc                                >  2:760606‑M1/1‑114 (MQ=255)
                                                                                                                                                    |                                                                                                                                              
TTGGGGTTGTCGTTGACTTCGATCACCAGTACACGGTCGCCGGTCTGCTTCAGGTCCACACCGTACAGCCCTTGCCCGATGAGCCTGGCAGTGTCGACGGCCAGCTTTACGACTTCGGGTGGTGCCTGTTCCACCGGGACCGCGCGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTGG  >  NC_002947/3359838‑3360128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: