Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,553,216 T→A 5.5% L277Q (CTG→CAG)  PP_3137 → group 2 family glycosyl transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,553,2160TA 5.5% 277.8 / 5.0 91L277Q (CTG→CAG) PP_3137group 2 family glycosyl transferase
Reads supporting (aligned to +/- strand):  ref base T (42/44);  new base A (3/2);  total (45/46)
Fisher's exact test for biased strand distribution p-value = 6.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01

CCAGCCACCCGAGCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTACAAGTGAG  >  NC_002947/3553067‑3553365
                                                                                                                                                     |                                                                                                                                                     
ccagccaCCCGAGCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCt                                                                                                                                                       >  1:622924/1‑150 (MQ=255)
ccagccaCCCGAGCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCt                                                                                                                                                       >  2:854614/1‑150 (MQ=255)
  agccaCCCGAGCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGGTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCGGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCCACCCACTGCAGGCGGTGGGACTgg                                                                                                                                                     >  2:1924634/1‑150 (MQ=255)
    ccaCCCGAGCGGCATTAGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGTTCTACCCACTGCAGGCGGCGCGCCAGgcg                                                                                                                                                   >  1:320462/1‑150 (MQ=255)
     caCCCGAGCGGCATTGGCTGCGTGCGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGgcgc                                                                                                                                                  <  2:892749/150‑1 (MQ=255)
          gAGCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGCGCGCCAGGCGcaccgc                                                                                                                                             <  2:320462/150‑1 (MQ=255)
               gCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGTGCCTGGCGCGCCGcggcgg                                                                                                                                        >  2:1770136/1‑150 (MQ=255)
               gCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGcggcgg                                                                                                                                        >  1:1141963/1‑150 (MQ=255)
                cATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCggcggc                                                                                                                                       >  1:306061/1‑150 (MQ=255)
                cATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCggcggc                                                                                                                                       <  1:854614/150‑1 (MQ=255)
                 aTTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCa                                                                                                                                      <  2:1651221/150‑1 (MQ=255)
                    ggCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGt                                                                                                                                   <  1:1924634/150‑1 (MQ=255)
                     gCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTg                                                                                                                                  >  2:1289311/1‑150 (MQ=255)
                     gCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTg                                                                                                                                  >  2:241114/1‑150 (MQ=255)
                     gCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTg                                                                                                                                  >  2:1428126/1‑150 (MQ=255)
                              gTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCTGCGGCAAGTGGACGCGCga                                                                                                                         <  2:1141963/150‑1 (MQ=255)
                               tCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCgag                                                                                                                        >  2:906931/1‑150 (MQ=255)
                                        gCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGTGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTg                                                                                                               <  1:1770136/150‑1 (MQ=255)
                                        gCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTg                                                                                                               <  1:1133424/150‑1 (MQ=255)
                                           tGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGCGCGCCAGGCGcaccgcc                                                                                                                                            <  2:978865/118‑2 (MQ=255)
                                           tGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGCGCGCCAGGCGcaccgcc                                                                                                                                            >  1:978865/1‑117 (MQ=255)
                                             gTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGc                                                                                                          <  2:1815555/150‑1 (MQ=255)
                                                   gggCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGtt                                                                                                    >  2:1915519/1‑150 (MQ=255)
                                                    ggCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTc                                                                                                   >  2:25297/1‑150 (MQ=255)
                                                    ggCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTc                                                                                                   <  1:1915519/150‑1 (MQ=255)
                                                     gCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTcc                                                                                                  >  2:1282927/1‑150 (MQ=255)
                                                     gCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGAGTTACCCTCTTGACGACGCGCGCATGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTcc                                                                                                  >  1:137291/1‑150 (MQ=255)
                                                       cTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCCGGCGGTGCGCCTGGCCCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTg                                                                                                <  2:115389/150‑1 (MQ=255)
                                                       cTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTTGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTg                                                                                                >  2:1126962/1‑150 (MQ=255)
                                                         gggCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTTGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGgt                                                                                              <  1:1126962/150‑1 (MQ=255)
                                                         gggCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGgt                                                                                              <  1:1428126/150‑1 (MQ=255)
                                                         gggCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGATCTTATAGAGCCAATGCCGACTGCAAGCGGTGCCCCTGGCGCGAAGCGGCAACTAATGGACCCGTTTTGTCTGGCTGCAGGCCGTGTTCCTGgt                                                                                              <  1:1893422/150‑1 (MQ=255)
                                                           gCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGgtgt                                                                                            <  1:1918256/150‑1 (MQ=255)
                                                             aTACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTg                                                                                          >  2:1920523/1‑150 (MQ=255)
                                                             aTACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTg                                                                                          <  1:1920523/150‑1 (MQ=255)
                                                              tACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTgg                                                                                         <  1:1289311/150‑1 (MQ=255)
                                                               aCCTTTGGTGATCGCGCTGTCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGGTGCTGTTGAACTCACCACTGCAGGCGGTTCGACTGGCCCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCGGCGGGCCGTGTTCCTGGTGTTggg                                                                                        >  2:277046/1‑150 (MQ=255)
                                                               aCCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTggg                                                                                        <  1:1282927/150‑1 (MQ=255)
                                                                 cTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCa                                                                                      >  2:1336529/1‑150 (MQ=255)
                                                                 cTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCa                                                                                      >  1:1150525/1‑150 (MQ=255)
                                                                 cTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCa                                                                                      >  1:1445754/1‑150 (MQ=255)
                                                                     ggTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGtt                                                                                  <  2:1198072/150‑1 (MQ=255)
                                                                         aTCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCg                                                                              <  1:317934/150‑1 (MQ=255)
                                                                         aTCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCg                                                                              <  1:25297/150‑1 (MQ=255)
                                                                          tcccgcTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCgg                                                                             >  1:1934432/4‑150 (MQ=255)
                                                                                   cctgcctgCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCg                                                                    <  1:1224250/150‑1 (MQ=255)
                                                                                    ctgcctgcTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCgg                                                                   >  1:1731090/1‑150 (MQ=255)
                                                                                     tgcctgcTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGc                                                                  <  2:1934432/150‑1 (MQ=255)
                                                                                           ctgctgGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGc                                                                                                                 <  1:809582/97‑1 (MQ=255)
                                                                                           ctgctgGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGc                                                                                                                 >  2:809582/1‑97 (MQ=255)
                                                                                            tgctgGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGGAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGGGTTCCTGGTGACGGGCAAGTTACCGGAAATGCTCGGCCAGCTGa                                                           >  1:1276250/1‑150 (MQ=255)
                                                                                             gctgGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTgg                                                                                         <  1:791792/119‑1 (MQ=255)
                                                                                             gctgGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTgg                                                                                         >  2:791792/1‑119 (MQ=255)
                                                                                                  gcggcTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTcc                                                     >  1:633990/1‑150 (MQ=255)
                                                                                                  gcggcTGGGGCCTGCTGTTGCTGTTGAGCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTcc                                                     >  1:1716613/1‑150 (MQ=255)
                                                                                                     gcTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGATCTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTgc                                                  <  2:937054/150‑1 (MQ=255)
                                                                                                     gcTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGcc                                                                                                         >  1:1848140/1‑95 (MQ=255)
                                                                                                     gcTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGcc                                                                                                         <  2:1848140/95‑1 (MQ=255)
                                                                                                     gcTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTgc                                                  <  2:622924/150‑1 (MQ=255)
                                                                                                     gcTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTgc                                                  <  1:906931/150‑1 (MQ=255)
                                                                                                     gcTGGGGCCTGCTGTTGCTGTCGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTgc                                                  <  2:996021/150‑1 (MQ=255)
                                                                                                       tGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTgcgc                                                >  2:390569/1‑150 (MQ=255)
                                                                                                         gggCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCa                                              >  1:84257/1‑150 (MQ=255)
                                                                                                                  gttgctgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGACCTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGc                                     <  2:1731090/150‑1 (MQ=255)
                                                                                                                  gttgctgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTgg                                                                                         <  1:1761742/98‑1 (MQ=255)
                                                                                                                  gttgctgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTgg                                                                                         >  2:1761742/1‑98 (MQ=255)
                                                                                                                  gttgctgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGc                                     >  1:1195357/1‑150 (MQ=255)
                                                                                                                    tgctgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCgg                                   <  1:390569/150‑1 (MQ=255)
                                                                                                                      ctgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCt                                 <  2:1195357/150‑1 (MQ=255)
                                                                                                                      ctgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCt                                 >  2:313328/1‑150 (MQ=255)
                                                                                                                      ctgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTACAAGGTGGAATCCTGTTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCt                                 >  2:1125638/1‑150 (MQ=255)
                                                                                                                       tgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCNAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTg                                >  1:609607/1‑150 (MQ=255)
                                                                                                                       tgttgATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTg                                <  2:1150525/150‑1 (MQ=255)
                                                                                                                            aTCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCaaa                           >  1:943680/1‑150 (MQ=255)
                                                                                                                             tCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGTCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAAt                          >  2:837339/1‑150 (MQ=255)
                                                                                                                              cTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCAGTAGCTTGCGGCTGGCAAATc                         <  1:1125638/150‑1 (MQ=255)
                                                                                                                                 cccACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGTCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGc                      <  1:837339/150‑1 (MQ=255)
                                                                                                                                  ccACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCt                     >  2:1814196/1‑150 (MQ=255)
                                                                                                                                  ccACTGCAGGCGGTGCGCCTGGCGAGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCCCCGCCTTCCGGCTGGCAAGTCGGCt                     >  2:603228/1‑150 (MQ=255)
                                                                                                                                    ccTGCAGGCGGGGCACCTGGCGCGCGGCGCCCTCAAGTGGGCGCGCGATAACTGGCTGCAGTCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCTGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCttt                   <  2:609607/149‑1 (MQ=255)
                                                                                                                                    acggCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCttt                   <  1:603228/147‑1 (MQ=255)
                                                                                                                                    aCTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCttt                   >  2:1816133/1‑150 (MQ=255)
                                                                                                                                      tGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGa                 >  2:647665/1‑150 (MQ=255)
                                                                                                                                       cgccgcggcgCGCCAGGCGCACCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGAt                >  2:855193/5‑150 (MQ=255)
                                                                                                                                        cAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTggg                                                                                        <  1:1312045/77‑1 (MQ=255)
                                                                                                                                        cAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTggg                                                                                        >  2:1312045/1‑77 (MQ=255)
                                                                                                                                         aGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCg              >  1:1461553/1‑150 (MQ=255)
                                                                                                                                          gggggTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCGAGTTCCCGGAAGTGCTCGGCGTACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGGGTTGATCGa             <  2:1525/147‑1 (MQ=255)
                                                                                                                                           gCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAg            <  1:647665/150‑1 (MQ=255)
                                                                                                                                             ggTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAANTTCCTGNGCCACCGCCTTGNGGCTGGCAAATCGGCTTTGATCGAGTa          <  1:1336529/150‑1 (MQ=255)
                                                                                                                                             ggTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTa          >  1:1451841/1‑150 (MQ=255)
                                                                                                                                                  gcCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGACCTGGCTGCAGTCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTACAAGt     <  1:1583683/150‑1 (MQ=255)
                                                                                                                                                  gcCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTACAAGt     <  1:241114/150‑1 (MQ=255)
                                                                                                                                                     tGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTACAAGTgag  <  1:534745/150‑1 (MQ=255)
                                                                                                                                                     tGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGAAAATGCTCGGCCAACTGAAGTTCCTGCGCCCCCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTACAAGTgag  <  1:534767/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CCAGCCACCCGAGCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCGGCAAGTGGACGCGCGAGAACTGGCTGCAGGCCGTGTTCCTGGTGTTGGGCAAGTTCCCGGAAATGCTCGGCCAACTGAAGTTCCTGCGCCACCGCCTTGCGGCTGGCAAATCGGCTTTGATCGAGTACAAGTGAG  >  NC_002947/3553067‑3553365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: