| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,753,638 | G→T | 9.9% | A96A (GCC→GCA) | PP_3316 ← | chaperone‑associated ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,753,638 | 0 | G | T | 9.9% | 228.1 / 10.4 | 78 | A96A (GCC→GCA) | PP_3316 | chaperone‑associated ATPase |
| Reads supporting (aligned to +/- strand): ref base G (31/38); new base T (5/3); total (36/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 | |||||||||||
TCCGTGGCACGCTTGGCGGCTTCCTGCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTGGCGCACCAATTGGCGGTAGTGATCATCACAC > NC_002947/3753489‑3753785 | tCCGTGGCACGCTTGGCGGCTTCCTGCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTg > 1:1746536/1‑150 (MQ=255) ccGTGGCACGCTTGGCGGCTTCCTGCAACAGGACCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGCCGGTTCAGCCACTTCATCGGCATCCGTgg < 1:693463/150‑1 (MQ=255) gTGGCACGCTTGGCGGCTTCCTGCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCa > 2:988724/1‑150 (MQ=255) ggCACGCTTGGCGGCTTCCTGCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGATGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAAc > 1:1264185/1‑150 (MQ=255) aCGCTTGGCGGCTTCCTGCAACAGGGCCTCGGAGTGTTCGCTACTGCAGCTCACCAGTCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGa < 1:918847/150‑1 (MQ=255) ggcggcTTCCTGCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGa < 2:48110/150‑1 (MQ=255) ggcggcTTCCTGCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGATGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGa < 2:1264185/150‑1 (MQ=255) gcggcTTCCTGCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAg < 1:306858/150‑1 (MQ=255) cTTCCTGCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGtctt > 1:2020/1‑150 (MQ=255) ttCCTGCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGtcttc > 1:1377471/1‑150 (MQ=255) tCCTGCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTTGCCACGGATGCCGatgaagtg < 2:1462014/150‑8 (MQ=255) ccTGCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGTGTGCAGCACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTtctc < 1:1005809/150‑1 (MQ=255) gCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGa < 2:1377471/150‑1 (MQ=255) gCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGa < 1:1495075/150‑1 (MQ=255) cAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGAt < 2:1388541/150‑1 (MQ=255) gggCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTg < 2:1108516/119‑1 (MQ=255) gggCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTg > 1:1108516/1‑119 (MQ=255) gggCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTTGCCACGGATg > 1:777311/1‑129 (MQ=255) gggCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTTGCCACGGATg < 2:777311/129‑1 (MQ=255) gCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCgcagc < 2:935341/150‑1 (MQ=255) ccTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCgcagca > 2:1199972/1‑150 (MQ=255) cTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTACCGACACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCaa > 1:1090155/1‑150 (MQ=255) gAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCg > 2:1282121/1‑150 (MQ=255) gtgtTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCt < 2:1173993/150‑1 (MQ=255) gtTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGAAGCTGGGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGGTGCCGAGTCTGCTCCGATGCGAAGAAAATCGCTGc > 1:347123/1‑150 (MQ=255) cccTGATGCGGTTGGCCAGCCCGCTGCTGCGTCGGCGGGGCAGGCCGTACGCTGCGCGGCCATGTTCCCCAGACGACGCTTCATCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCa < 2:514217/148‑1 (MQ=255) gATGCGGCTTGCCAGCCCGCTGATGCGGCGGCTTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCATCAGCCACTTCATCGGCAAACGTAGAATGACATAGGGTTTCGTCTCCGATGCGCAGCAAATCGCTGCCCACGaa < 1:1791220/150‑1 (MQ=255) gCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAActc < 2:1746536/150‑1 (MQ=255) cGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGTCGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATg > 1:1846528/1‑144 (MQ=255) cGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATg < 2:1846528/144‑1 (MQ=255) cGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAActct < 1:988724/150‑1 (MQ=255) gCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTc < 2:846296/150‑1 (MQ=255) ggCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGaa < 2:2020/150‑1 (MQ=255) gCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGTCCATGAACTCTTCGAAc < 2:993728/150‑1 (MQ=255) gCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAAc > 2:1663491/1‑150 (MQ=255) gCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAAc < 1:1622081/150‑1 (MQ=255) ccAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGcc < 2:217504/101‑1 (MQ=255) ccAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGcc > 1:217504/1‑101 (MQ=255) acAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACa > 1:860617/2‑150 (MQ=255) ccGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCgcag < 1:1082838/116‑1 (MQ=255) ccGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCgcag > 2:1082838/1‑116 (MQ=255) cggcggcgTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAg < 1:1199972/150‑1 (MQ=255) gtggcgtgCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGa < 1:467624/142‑1 (MQ=255) gtggcgtgCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGa > 2:467624/1‑142 (MQ=255) gtggcgtgCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGaaaa > 1:431754/1‑150 (MQ=255) ggcgtgCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAgg > 1:895333/1‑150 (MQ=255) cgtgCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGc < 1:1663491/150‑1 (MQ=255) tgCCGGACGCTGCGCGGCCAGGTTCCCCAGAGGACGCTTCAGCCACTTCATCGGTACCCTGGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCtt < 1:20079/150‑1 (MQ=255) gCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTc < 2:250318/150‑1 (MQ=255) cGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCa > 2:1779901/1‑150 (MQ=255) gACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGt < 2:860617/150‑1 (MQ=255) aCGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTg > 2:1291484/1‑150 (MQ=255) cGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTgg < 1:1282121/150‑1 (MQ=255) ccAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTg < 2:431754/150‑1 (MQ=255) ggTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGaaaa < 2:1253024/124‑1 (MQ=255) ggTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGaaaa > 1:1253024/1‑124 (MQ=255) ccccAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGttttt > 1:906909/1‑150 (MQ=255) cccAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGaa > 1:3615/1‑96 (MQ=255) cccAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGaa < 2:3615/96‑1 (MQ=255) ccAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGc > 1:159568/1‑150 (MQ=255) aGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTg > 2:1910680/1‑150 (MQ=255) aGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTg < 1:1291484/150‑1 (MQ=255) gacgacGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTgg > 1:738080/1‑150 (MQ=255) gacgCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAActc < 2:1563295/83‑1 (MQ=255) gacgCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAActc > 1:1563295/1‑83 (MQ=255) aCTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTGGCGCACCAATTGGCgg > 2:1480594/1‑150 (MQ=255) ctCGGCATCCGTTGCCACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTggg > 2:737607/2‑109 (MQ=255) ctCGGCATCCGTTGCCACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTggg < 1:737607/108‑1 (MQ=255) tCGGCATCCGTTGCCACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTGGCGCACCAATTGGCGGTAGTGa > 1:286323/1‑150 (MQ=255) tCGGCATCCGTTGCCACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGCGGGGAAAGGGTGCGTTTTTGCTGGCGCACCAATTGGCGGTAGTGa > 2:87505/1‑150 (MQ=255) tCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGc > 1:1371144/1‑126 (MQ=255) tCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGc < 2:1371144/126‑1 (MQ=255) ggCATCCGTTGCCACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTGGCGCACCAATTGGCGGTAGTGatc > 1:988471/1‑150 (MQ=255) ggCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTGGCGCACCAATTGGCGGTAGTGatc < 2:1090155/150‑1 (MQ=255) gCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAg > 2:1697093/1‑92 (MQ=255) gCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAg < 1:1697093/92‑1 (MQ=255) cATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTGGCGCACCAATTGGCGGTAGTGatcat < 1:1779901/150‑1 (MQ=255) ccGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTGGCGCACCAATTGGCGGTAGTGATCATcac > 2:1493088/1‑150 (MQ=255) cGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTGGCGCACCAATTGGCGGTAGTGATCATcaca > 1:375202/1‑150 (MQ=255) gTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTGGCGCACCAATTGGCGGTAGTTATCATcacac < 2:159568/150‑1 (MQ=255) tGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTGGCGCACCAATTGGCGGTAGTGATCATcac < 2:499616/147‑1 (MQ=255) tGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTGGCGCACCAATTGGCGGTAGTGATCATcac > 1:499616/1‑147 (MQ=255) | TCCGTGGCACGCTTGGCGGCTTCCTGCAACAGGGCCTCGGAGTGTTCGCTGATGCGGCTGGCCAGCCCGCTGCTGCGGCGGCGTGGCGTGCCGGACGCTGCGCGGCCAGGTTCCCCAGACGACGCTTCAGCCACTTCATCGGCATCCGTGGCAACGGATGCCGAGTCTTCTCCGATGCGCAGCAAATCGCTGCCCATGAACTCTTCGAACAAACCGCTGCGCGAGCCGAAAAGGGCTTCCAGTGGGGAAAGGGTGCGTTTTTGCTGGCGCACCAATTGGCGGTAGTGATCATCACAC > NC_002947/3753489‑3753785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |