| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,960,659 | T→A | 5.3% | intergenic (‑231/‑98) | mnxG ← / → PP_3491 | manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,960,659 | 0 | T | A | 5.3% | 231.5 / 4.3 | 78 | intergenic (‑231/‑98) | mnxG/PP_3491 | manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein |
| Reads supporting (aligned to +/- strand): ref base T (35/38); new base A (2/2); total (38/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.71e-01 | |||||||||||
TTGTACGATCAACCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAG > NC_002947/3960512‑3960807 | ttGTACGATCAACCGCAACGGATTGGGGAGGACCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCg > 1:1423747/1‑150 (MQ=255) tGTACGATCAACCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGa > 1:1742183/1‑150 (MQ=255) gATCAACCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑Ttgtg > 1:1876424/1‑150 (MQ=255) aTCAACCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGc > 2:888425/1‑150 (MQ=255) aaCCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAg < 1:1128230/150‑1 (MQ=255) gaggaTCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCTCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAg < 2:5881/150‑1 (MQ=255) gaggaTCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAgg < 1:1880632/134‑1 (MQ=255) gaggaTCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAgg > 2:1880632/1‑134 (MQ=255) gaggaTCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAg < 1:283984/150‑1 (MQ=255) tCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCTCATGCCAGGATcc > 2:256079/1‑150 (MQ=255) ccccAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAGAACGCACGGTA‑CCCTTGCACAATTTTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTg < 1:210860/150‑1 (MQ=255) cccAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑tt > 2:192892/1‑118 (MQ=255) cccAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑tt < 1:192892/118‑1 (MQ=255) cccAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGc > 2:500933/1‑150 (MQ=255) cccAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGc > 1:1842907/1‑150 (MQ=255) cccAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGc > 1:1005232/1‑150 (MQ=255) cccAGCAGGTTCCCCCGAATCGGGGGACGGAAACACGTGGGGTCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGc < 2:1423747/150‑1 (MQ=255) ccAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCg > 2:39229/1‑150 (MQ=255) caagcagGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCg > 2:773298/3‑150 (MQ=255) ggTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGAtcctc < 1:1765349/150‑1 (MQ=255) ggTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGAtcctc < 2:1837950/150‑1 (MQ=255) gTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCCTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGAtcctcc < 1:1600321/150‑1 (MQ=255) cgtCCCCCGATTCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGCCGA‑TTGTGCAGGAAGAATGCTTAGGCCAGGACGCTGCGAtcctcc > 2:17351/3‑150 (MQ=255) cccccGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGc > 2:1193110/1‑150 (MQ=255) ccccGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCg > 1:583339/1‑150 (MQ=255) cccGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGa > 2:1427680/1‑150 (MQ=255) ccGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGaa > 2:1256396/1‑150 (MQ=255) gggggACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGa < 1:773298/150‑1 (MQ=255) gggggACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGa < 1:1193110/150‑1 (MQ=255) ggAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACt < 2:583339/150‑1 (MQ=255) aaTCCCGTGGGTGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACCAGTCGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTg > 1:49798/1‑150 (MQ=255) aaTCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCTATCCTCCAGCGAACTCCAGACTTCACTTg < 1:256079/150‑1 (MQ=255) ccGTGGGGGCAAAGGCTGCTCCACAGGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGc > 1:1910562/1‑127 (MQ=255) ccGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGc < 2:1910562/127‑1 (MQ=255) ggggCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCaa < 2:1005232/150‑1 (MQ=255) aGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACaaa < 1:1427680/150‑1 (MQ=255) ggtgctCGACAAGCGCGCGCTGGCCGCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGc > 2:76008/3‑150 (MQ=255) tgctCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAg > 1:877401/1‑150 (MQ=255) cacaAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATCGACAA‑TTGTGCAAg < 1:876790/70‑1 (MQ=37) cacaAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATCGACAA‑TTGTGCAAg > 2:876790/1‑70 (MQ=37) acaAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGaa < 2:1319405/150‑1 (MQ=255) cgcgcgcTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCaa < 1:1256396/150‑1 (MQ=255) gcgcgcTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAAt < 2:1096151/150‑1 (MQ=255) gcgcTGGCCTCACACAAGGAAAAACCGCACGGTACCCCTAACTCATTAGT‑GA‑TTCTGTGAATCAAAGTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAACTAAATCACAAAGCAGGGAGAACGCAAtta < 2:1876424/150‑3 (MQ=255) gCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGATTTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGa < 1:1342308/83‑1 (MQ=255) gCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGATTTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGa > 2:1342308/1‑83 (MQ=255) ccTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAg > 2:642542/1‑126 (MQ=255) ccTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAg < 1:642542/126‑1 (MQ=255) ccTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACt < 2:1822348/145‑1 (MQ=255) ccTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACt > 1:1822348/1‑145 (MQ=255) cTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCacac > 2:1616364/1‑150 (MQ=255) tCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCa > 2:1308467/1‑126 (MQ=255) tCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCa < 1:1308467/126‑1 (MQ=255) tCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAAc < 1:60740/134‑1 (MQ=255) tCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAAc > 2:60740/1‑134 (MQ=255) acaAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACtt < 1:979380/102‑1 (MQ=255) acaAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACtt > 2:979380/1‑102 (MQ=255) ggTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAgg < 2:786695/120‑1 (MQ=255) ggTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAgg > 1:786695/1‑120 (MQ=255) ggTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAAc < 2:1712336/126‑1 (MQ=255) ggTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAAc > 1:1712336/1‑126 (MQ=255) aaaaaCCCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCg < 1:39229/150‑1 (MQ=255) aaaCGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGAATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAAGCAATAACAAAGCAGGGAAAACGCAATGACTGCACACGCTCATACCCCGgc > 1:408655/1‑150 (MQ=255) gCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTc < 2:1504089/77‑1 (MQ=255) gCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTc > 1:1504089/1‑77 (MQ=255) tA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGAc < 1:76008/150‑1 (MQ=255) cccTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCa < 2:877401/150‑1 (MQ=255) ccTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCAt < 1:1616364/150‑1 (MQ=255) cTTGCACAATCGACAA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCaa > 1:1054007/1‑89 (MQ=38) cTTGCACAATCGACAA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCaa < 2:1054007/89‑1 (MQ=38) ttGCACAATTGTCGA‑TTGTGCAAGGCAAATTCTCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGt > 1:1715990/1‑150 (MQ=255) ttGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCaa < 1:1081456/88‑1 (MQ=255) ttGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCaa > 2:1081456/1‑88 (MQ=255) tGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTa < 1:500933/150‑1 (MQ=255) ttGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCg > 1:227031/1‑150 (MQ=255) ttGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCg > 1:1265751/1‑150 (MQ=255) tGTCTA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGCGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGa < 1:23938/150‑1 (MQ=255) gTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTCCCGGCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAg < 1:17351/150‑1 (MQ=255) tCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGAc < 2:40306/103‑1 (MQ=255) tCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGAc > 1:40306/1‑103 (MQ=255) | TTGTACGATCAACCGCAACGGATTGGGGAGGATCCCCCAGCAGGTTCCCCCGAATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTA‑CCCTTGCACAATTGTCGA‑TTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAG > NC_002947/3960512‑3960807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |