| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,045,979 | T→G | 5.6% | Q262P (CAG→CCG) ‡ | PP_3567 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,045,979 | 0 | T | G | 5.6% | 209.5 / 4.6 | 72 | Q262P (CAG→CCG) ‡ | PP_3567 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (34/34); new base G (2/2); total (36/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.54e-01 | |||||||||||
GCAATGCGGCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTCCAG > NC_002947/4045830‑4046127 | gcAATGCGGCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCt > 2:771384/1‑150 (MQ=255) cAATGCGGCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTg < 1:1041043/150‑1 (MQ=255) aaTGCGGCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGc < 1:439240/150‑1 (MQ=255) tGCGGCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCa < 1:214537/150‑1 (MQ=255) ggCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCaata < 2:641161/150‑4 (MQ=255) cTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCgg < 1:844346/150‑1 (MQ=255) tttGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCggg < 2:1455035/150‑1 (MQ=255) tttGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCggg < 1:1677795/150‑1 (MQ=255) aaCACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCa > 1:461687/1‑150 (MQ=255) acacTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAg < 1:1353381/150‑1 (MQ=255) acTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCTATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGgc < 2:1423664/150‑1 (MQ=255) ccGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGcc < 2:1398687/150‑1 (MQ=255) ccGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGcc < 1:1942474/150‑1 (MQ=255) cGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCa > 1:518396/1‑150 (MQ=255) cGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCa > 2:1171647/1‑150 (MQ=255) tGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGa > 1:681596/1‑120 (MQ=255) tGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGa < 2:681596/120‑1 (MQ=255) ttttCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGt > 2:341298/1‑150 (MQ=255) cGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCGTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTAcca < 1:238498/150‑1 (MQ=255) gTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTc < 1:1836376/150‑1 (MQ=255) gATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGc > 1:361996/1‑150 (MQ=255) aaTGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCcagc > 1:1551473/1‑150 (MQ=255) aTGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCcagca > 1:504762/1‑150 (MQ=255) tGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCAGGCCAGTcc > 1:1701802/1‑87 (MQ=255) tGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCAGGCCAGTcc < 2:1701802/88‑2 (MQ=255) cGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGTCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTg < 2:1183243/150‑1 (MQ=255) aCCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATa > 1:1133441/1‑150 (MQ=255) ccgccgTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATAcc > 2:116730/1‑150 (MQ=255) gccgTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCTTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCAc < 1:1572395/150‑1 (MQ=255) gccgTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCAc > 2:354546/1‑150 (MQ=255) gccgTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCAc < 2:504762/150‑1 (MQ=255) gAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActgcct < 1:354546/150‑1 (MQ=255) gAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActgcct < 2:361996/150‑1 (MQ=255) gAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActgcct < 2:461687/150‑1 (MQ=255) gCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActgcctgc < 1:341298/150‑1 (MQ=255) cGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAg < 2:1302334/83‑1 (MQ=255) cGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAg > 1:1302334/1‑83 (MQ=255) ggtTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGAAGTGCGATACCACTGCCTGCCAGTTCCg > 2:257331/1‑150 (MQ=255) gtTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGt > 2:1540902/1‑150 (MQ=255) gtTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGt > 1:272928/1‑150 (MQ=255) gggCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGc < 1:771498/144‑1 (MQ=255) gggCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGc > 2:771498/1‑144 (MQ=255) gCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCAc < 1:116730/150‑1 (MQ=255) ataCAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGa > 1:110492/1‑119 (MQ=255) ataCAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGa < 2:110492/119‑1 (MQ=255) taCAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCACTTCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAAc > 1:724422/1‑150 (MQ=255) ggCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTc < 1:861152/150‑1 (MQ=255) ttGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCa > 2:1749563/1‑150 (MQ=255) gATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGTCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCAtt > 1:167326/1‑150 (MQ=255) gctgctATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGgc > 1:1186681/1‑150 (MQ=255) gctgctATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCCGCATTGgc < 1:751721/150‑1 (MQ=255) tATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACGAAGCGATCGGCAAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTgc > 1:1303729/1‑150 (MQ=255) tATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTgc > 2:369726/1‑150 (MQ=255) gCTGCGCCAGGACTGGCCTGCCAGTCGGGGAGTATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGt > 2:1194565/1‑150 (MQ=255) gCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGt < 2:1133441/150‑1 (MQ=255) cTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGc > 2:1274249/1‑122 (MQ=255) cTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGc < 1:1274249/122‑1 (MQ=255) tGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTgccaatagc > 2:114379/1‑143 (MQ=255) gcgcCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGc < 1:1171647/150‑1 (MQ=255) gcgcCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTGTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGc < 2:769651/150‑1 (MQ=255) ccccgACTGGCAGGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATg < 1:1059510/119‑1 (MQ=255) ccccgACTGGCAGGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATg > 2:1059510/5‑123 (MQ=255) ccAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCa > 2:1346232/1‑150 (MQ=255) aCTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTAc < 1:369726/150‑1 (MQ=255) tGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGt < 1:1346232/150‑1 (MQ=255) tGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGt > 1:1096815/1‑150 (MQ=255) ggCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTc > 2:1146410/1‑150 (MQ=255) gCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActgcct > 1:883064/1‑90 (MQ=255) gCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActgcct < 2:883064/90‑1 (MQ=255) gCCTGCCAGTCGGGGAATATTCGCTACCGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTTCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTcc > 1:355813/1‑150 (MQ=255) cTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTCCAg > 2:1063131/1‑150 (MQ=255) cTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTCCAg > 2:589235/1‑150 (MQ=255) cTGCCAGTCGGGGAATATTCGCTGCACGTCGGCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTCCAg > 1:1321517/1‑150 (MQ=255) | GCAATGCGGCTTTGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAGCCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTCCAG > NC_002947/4045830‑4046127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |