| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 220,563 | A→T | 8.0% | intergenic (+20/‑108) | PP_0168 → / → PP_5431 | putative surface adhesion protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 220,563 | 0 | A | T | 8.0% | 225.4 / 10.7 | 76 | intergenic (+20/‑108) | PP_0168/PP_5431 | putative surface adhesion protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (37/32); new base T (3/3); total (41/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.72e-01 | |||||||||||
CGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTGCAAC > NC_002947/220417‑220704 | cGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCg > 2:41282/1‑150 (MQ=255) tggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCg > 2:102411/1‑150 (MQ=255) ggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCgg < 2:142023/150‑1 (MQ=255) tATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGct > 1:1442885/1‑150 (MQ=255) gCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCggtggtct < 1:102411/150‑7 (MQ=255) cAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTcc > 2:1784976/1‑150 (MQ=255) aCGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTAccc > 1:1429163/1‑150 (MQ=255) tGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGcc < 1:946376/150‑1 (MQ=255) aCCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCaa > 1:581581/1‑150 (MQ=255) tGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATAc < 2:1836287/150‑1 (MQ=255) aaGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATActct < 2:972041/150‑1 (MQ=255) aGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTg > 1:1820259/1‑150 (MQ=255) ggCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTgg < 2:1163530/150‑1 (MQ=255) gCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAGCATCGCATACTCTGgc < 2:1442885/150‑1 (MQ=255) gTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCa < 1:1642631/139‑1 (MQ=255) gTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCa > 2:1642631/1‑139 (MQ=255) tCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGcc > 1:962452/1‑150 (MQ=255) cTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGc < 2:1194033/150‑1 (MQ=255) tGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGcc > 2:224382/1‑150 (MQ=255) gTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTg > 2:1010238/1‑150 (MQ=255) aCCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCggt < 2:638313/99‑2 (MQ=255) aCCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCggt > 1:638313/1‑98 (MQ=255) aCCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCg > 2:566237/1‑139 (MQ=255) aCCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCg < 1:566237/139‑1 (MQ=255) cAGACGATGAAGTTTTTTATCAGCGGCGCGGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGccc > 2:1484750/1‑150 (MQ=255) gACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCCCATACTCTGGCGCCGGGCCTGCGCGCCCgg > 2:489969/1‑150 (MQ=255) gACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCCGGGCCGCGCGGCGGCCCCGGCGCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGGCTGCGCGCCCgg > 1:1203601/1‑150 (MQ=255) aCGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGc < 2:1363803/150‑1 (MQ=255) gATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTgg < 2:1554922/127‑1 (MQ=255) gATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTgg > 1:1554922/1‑127 (MQ=255) gATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGa > 1:296865/1‑150 (MQ=255) aTCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGAt < 2:1820259/150‑1 (MQ=255) aCTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCttt < 2:962452/150‑1 (MQ=255) cTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTg < 1:224382/150‑1 (MQ=255) tCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGc < 2:1429163/150‑1 (MQ=255) gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGctc < 1:893763/85‑1 (MQ=255) gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGctc > 2:893763/1‑85 (MQ=255) gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCTCCAACAGCGCATACTCTGGCGCCGGGCCCGCGCGCCCGGCGATCTTTGCCt > 1:111471/1‑150 (MQ=255) gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCt < 1:1920767/128‑1 (MQ=255) gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCt > 2:1920767/1‑128 (MQ=255) gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCt > 2:1915030/1‑150 (MQ=255) gATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCtt < 1:643821/84‑1 (MQ=255) gATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCtt > 2:643821/1‑84 (MQ=255) gATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTAtg > 2:1692561/1‑150 (MQ=255) tCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGTACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTAtgct > 2:1117813/1‑150 (MQ=255) gcgcCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCa > 1:1002196/1‑99 (MQ=255) gcgcCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCa < 2:1002196/99‑1 (MQ=255) gACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAg < 1:1803445/150‑1 (MQ=255) aCCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTg > 1:225745/1‑95 (MQ=255) aCCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTg < 2:225745/95‑1 (MQ=255) aCCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCCACCAACAAgg < 1:672828/150‑1 (MQ=255) catcatcCACAACAAGGACAGCTGACAGGCCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAg > 2:572415/1‑144 (MQ=255) catcatcCACAACAAGGACAGCTGACAGGCCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAg < 1:572415/144‑1 (MQ=255) tcatcCACAACAATGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGc < 1:1038834/119‑1 (MQ=255) tcatcCACAACAATGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGc > 2:1038834/1‑119 (MQ=255) tcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTg > 1:1512164/1‑150 (MQ=255) ccACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGa > 1:1656396/1‑150 (MQ=255) cacaACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGAc > 1:1424664/1‑150 (MQ=255) caacaaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGa < 2:1656396/150‑1 (MQ=255) acaaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAgg < 1:1915030/150‑1 (MQ=255) acaaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAgg > 1:1302581/1‑150 (MQ=255) ggACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTa > 2:1613161/1‑109 (MQ=255) ggACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTa < 1:1613161/109‑1 (MQ=255) tGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACAAACAAGGAAACAACGTGACGAGGGACATCGCCAt > 1:346003/1‑150 (MQ=255) gACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATg > 1:214945/1‑150 (MQ=255) aCAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGcc < 2:1297472/98‑1 (MQ=255) aCAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGcc > 1:1297472/1‑98 (MQ=255) aCAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACg > 2:1793027/1‑129 (MQ=255) aCAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACg < 1:1793027/129‑1 (MQ=255) ccGGGGCCGCTGTGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGc > 1:748392/1‑80 (MQ=38) ccGGGGCCGCTGTGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGc < 2:748392/80‑1 (MQ=38) ccGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCt > 1:143033/1‑145 (MQ=255) ccGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCt < 2:143033/145‑1 (MQ=255) ggCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCt < 1:1619799/141‑1 (MQ=255) ggCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCt > 2:1619799/1‑141 (MQ=255) ggCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgcaac < 1:41282/150‑1 (MQ=255) | CGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTGCAAC > NC_002947/220417‑220704 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |