| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,301,619 | G→C | 11.6% | intergenic (+65/‑1235) | PP_3774 → / → PP_5627 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,301,619 | 0 | G | C | 11.6% | 278.7 / 26.1 | 95 | intergenic (+65/‑1235) | PP_3774/PP_5627 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (36/48); new base C (5/6); total (41/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.78e-01 | |||||||||||
CAACCAGGTCGACTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTATAACGCTCGGCATTGGATGCCCGCGATGGGTCCGGCGGGC > NC_002947/4301470‑4301754 | cAACCAGGTCGACTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAgcg > 2:444062/1‑150 (MQ=255) aaCCAGGTCGACTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAgcgc > 1:1411311/1‑150 (MQ=255) aaCCAGGTCGACTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAgcgc > 1:1412810/1‑150 (MQ=255) aaCCAGGTCGACTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTAATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAgcgc > 1:621986/1‑150 (MQ=255) ccAGGTCGACTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGCACGTCGATGCCCAGCCCTGCTATCAAACCCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCgg < 2:360316/150‑1 (MQ=255) ccAGGTCGACTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCgg > 1:841198/1‑150 (MQ=255) cAGGTCGACTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCggg < 1:1219629/150‑1 (MQ=255) cAGGTCGACTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCggg < 2:841198/150‑1 (MQ=255) gTCGACTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGgggct > 1:967605/1‑150 (MQ=255) gTCGACTACACCGACGCAACCCCCGCCGAGGACGGCTCCGTTTCTAAGGTCATCGATCTCTCGCTCATCCATAGCTGGACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGgggct < 1:1399295/150‑1 (MQ=255) gatctcacCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGgggctggg < 1:1773273/145‑1 (MQ=255) gACTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGgggctggg < 1:515026/150‑1 (MQ=255) gACTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGgggctggg > 1:1243953/1‑150 (MQ=255) aaCTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGgggctggg < 2:602014/149‑1 (MQ=255) cTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGgggctgggct > 1:385989/1‑150 (MQ=255) cTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCCCCgcgctgggct < 2:1824314/150‑1 (MQ=255) cacCGACGCAACCCCCGCCGTGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCt > 2:1918268/1‑150 (MQ=255) cacCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCt > 2:1266612/1‑150 (MQ=255) acCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGAGCGTCGCAGTAATGCAAAAATCCCAGCGCGgggctgggcagatt > 2:1773273/1‑145 (MQ=255) ccGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTAt < 2:1281632/150‑1 (MQ=255) ccGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTAt < 2:967605/150‑1 (MQ=255) ccGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCCCCgcgctgggct > 2:1102057/1‑145 (MQ=255) ccGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCCCCgcgctgggct < 1:1102057/145‑1 (MQ=255) cGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCCCCGCGCTGGGCttttt < 2:1327741/148‑4 (MQ=255) cGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCCCCGCGCTGGGCttttt > 1:1327741/1‑145 (MQ=255) gCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGGCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGCCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCt < 2:1677919/150‑1 (MQ=255) cAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGTTAGTTCTCGCTCATCCACCGCTGCACGTCGATGCCCAGACCTGCTCTCAAATCCCCTCAGCGCGTTGCATGAATCCAAACCGCCCATTGCCGGGCTGGGCTTCTATCAGCTg < 2:712067/150‑1 (MQ=255) aCCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTggg < 1:756191/150‑1 (MQ=255) ccccGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCt > 2:1591144/1‑150 (MQ=255) ccccGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCt > 2:540904/1‑150 (MQ=255) ccccGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCt > 1:300743/1‑150 (MQ=255) ccgAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACa < 2:1411311/150‑1 (MQ=255) cgAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAg < 2:1530020/150‑1 (MQ=255) gAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGt < 2:1837665/150‑1 (MQ=255) ggCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTcc > 2:204366/1‑150 (MQ=255) cTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGc > 1:448181/1‑150 (MQ=255) cTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGc > 2:1350948/1‑150 (MQ=255) tGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCtt < 2:1864761/150‑1 (MQ=255) gCATCATCAGCGAGCTCTCGCTCATCCATCTCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCttt < 1:1371245/150‑1 (MQ=255) tcatcaGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTaca < 1:444062/150‑1 (MQ=255) tcaGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGc < 1:483943/136‑1 (MQ=255) tcaGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGc > 2:483943/1‑136 (MQ=255) tcaGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTacacac > 2:730741/1‑150 (MQ=255) tcaGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTacacac < 1:540904/150‑1 (MQ=255) aGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCtt < 1:76990/108‑2 (MQ=255) aGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCtt > 2:76990/1‑107 (MQ=255) gCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTc > 2:1187252/1‑130 (MQ=255) gCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTc < 1:1187252/130‑1 (MQ=255) gCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGt > 1:99318/1‑150 (MQ=255) cGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATTAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGGGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACCCTGTa < 2:101688/150‑1 (MQ=255) gAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTAc < 2:385989/150‑1 (MQ=255) gAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTAc < 2:948690/150‑1 (MQ=255) tctctCGCTCATCCATCGCTGTACGTCGATGCCCAGCCCAGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGTCCTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTg < 2:156585/149‑1 (MQ=255) tctcGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGa > 1:553081/1‑150 (MQ=255) tctcGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCAATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCGTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGa > 1:1847413/1‑150 (MQ=255) ctcGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGaa < 1:1350948/150‑1 (MQ=255) ctcGCTCATCCATCGCTGAACGTCGATGCCCAGCCCCGCAAGCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGaa < 1:510138/150‑1 (MQ=255) tcGCTCATCCATCGCTGAACGTCGATGCCCTGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAACGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGaca > 1:156585/1‑148 (MQ=255) gCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGtt < 1:1810377/150‑1 (MQ=255) gCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGtt > 2:1810377/1‑150 (MQ=255) atccatcGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCCCCgcgctgggc > 1:1725685/1‑88 (MQ=255) atccatcGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCCCCgcgctgggc < 2:1725685/88‑1 (MQ=255) ccatcGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCa > 2:1545891/1‑150 (MQ=255) atcGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGt < 2:300743/150‑1 (MQ=255) atcGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGt > 1:566896/1‑150 (MQ=255) tcGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTg < 2:1243953/150‑1 (MQ=255) gAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGgcgc < 1:1918268/150‑1 (MQ=255) cGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCa > 1:1703313/1‑108 (MQ=255) cGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCa < 2:1703313/108‑1 (MQ=255) gTCGATGCCCAGCCCCGCTATCAAACCCCCTCAGGGCGTCGCATGAATGCAAAACGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGCACAGTACTTCCGCCCGCCTTTACTCACTGTACTGGAAGTTACTCCAGTGGGCGCTtgt < 2:130893/150‑1 (MQ=255) gATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTAGTTGaa < 2:482851/126‑1 (MQ=255) gATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGaa > 1:482851/1‑126 (MQ=255) cccAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGa > 1:1010101/1‑145 (MQ=255) cccAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGa < 2:1010101/145‑1 (MQ=255) ccAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGCATGCAAAAAGACCCGCGAGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACta > 1:242964/1‑150 (MQ=255) ccAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACta > 1:1571230/1‑150 (MQ=255) ccAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACta > 1:1931527/1‑150 (MQ=255) cAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACtat > 2:139118/1‑150 (MQ=255) aGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTTGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACtata < 2:1412810/150‑1 (MQ=255) aGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACtata > 1:654120/1‑150 (MQ=255) cTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGt > 2:1618169/1‑105 (MQ=255) cTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGt < 1:1618169/105‑1 (MQ=255) cTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTATAACGCTCg > 1:446714/1‑150 (MQ=255) aaaCCCCTCAGGGCGTCGCATGAATGGAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGACTTTAAACACTGTACTGGAAGTTACTCCAGTGTGCGCTTGTGATAACTATAACGCTCGGCATTg < 2:632688/150‑1 (MQ=255) ccccTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTATAACGCTCGGCATTGGAt < 1:730741/150‑1 (MQ=255) cccTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTATAACGCTCGGCATTGGAt > 1:237315/1‑149 (MQ=255) cccTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTATAACGCTCGGCATTGGAt < 2:237315/149‑1 (MQ=255) ccTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGTATTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTATAACGCTCGGCATTGGATGc < 1:1591144/150‑1 (MQ=255) cAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTATAACGCTCGGCATTGGATGCCcg < 2:99318/150‑1 (MQ=255) aGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTATAACGCTCGGCATTGGATGCCcgc < 1:1266612/150‑1 (MQ=255) gCGTCGCATGAATTCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCCATTCAACTTAACAGTACTTCCGCCAGCCTTTACACTCTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTATAACGCTCGGCATTGGATGCCCGCGAt < 1:119072/150‑1 (MQ=38) gCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTATAACGCTCGGCATTGGATGCCCGCGAt < 2:621986/150‑1 (MQ=255) aTGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTcc < 2:1098477/95‑1 (MQ=255) aTGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTcc > 1:1098477/1‑95 (MQ=255) gCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTATAACGCTCGGCATTGGATGCCCGCGATGGGTCCGGCGGGc < 2:1931527/150‑1 (MQ=255) atagaaGCCCAGCCCCGCGCTGGGCTTTTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTCTAGCGCTCGGCAtt > 1:1556143/5‑123 (MQ=255) atagaaGCCCAGCCCCGCGCTGGGCTTTTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTATAACGCTCGGCAtt < 2:1556143/119‑1 (MQ=255) aaGCCCAGCCCCGCGCTGGGCTTTTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCttt < 2:1728514/60‑1 (MQ=25) aaGCCCAGCCCCGCGCTGGGCTTTTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCttt > 1:1728514/1‑60 (MQ=21) | CAACCAGGTCGACTACACCGACGCAACCCCCGCCGAGGACGGCTCGATCTGCATCATCAGCGAGCTCTCGCTCATCCATCGCTGAACGTCGATGCCCAGCCCTGCTATCAAAACCCCTCAGGGCGTCGCATGAATGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTATCAGCTGGGCTGAACAGTACTTCCGCCAGCCTTTACACACTGTACTGGAAGTTACTCCAGTGGGCGCTTGTGATAACTATAACGCTCGGCATTGGATGCCCGCGATGGGTCCGGCGGGC > NC_002947/4301470‑4301754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |