| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,560,900 | T→A | 7.9% | E231D (GAA→GAT) | PP_4048 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,560,900 | 0 | T | A | 7.9% | 264.5 / 10.6 | 87 | E231D (GAA→GAT) | PP_4048 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (39/41); new base A (3/4); total (42/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCAGAGGTCACCCGCCCAGCACTCATGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCCGCGAGAACCTTGGT > NC_002947/4560753‑4561040 | gCCAGAGGTCACCCGCCCAGCACTCATGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTc < 1:360857/150‑1 (MQ=255)gCCAGAGGTCACCCGCCCAGCACTCATGGCCATGGGATACGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTc < 1:1071324/150‑1 (MQ=255) ccAGAGGTCACCCGCCCAGCACTCATGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTcc > 1:557520/1‑150 (MQ=255) gagGTCACCCGCCCAGCACTCATGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGAAATCCCGc < 2:387590/150‑1 (MQ=255) gTCACCCGCCCAGCACTCATGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAg < 1:1059513/150‑1 (MQ=255) gTCACCCGCCCAGCACTCATGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAg < 2:1933617/150‑1 (MQ=255) tCACCCGCCCAGCACTCATGGCCATGGGCTCCTGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAgg < 1:1879339/150‑1 (MQ=255) aCCCGCCCAGCACTCATGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCa > 2:275451/1‑150 (MQ=255) ccGCCCAGCACTCATGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATg > 2:1172781/1‑150 (MQ=255) ccGCCCAGCACTCATGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATg > 2:1307625/1‑150 (MQ=255) ccGCCCAGCACTCATGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGAAATCCCGCatgc < 1:1024287/146‑4 (MQ=255) ccGCCCAGCACTCATGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGAAATCCCGCatgc > 2:1024287/1‑143 (MQ=255) aTGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCg > 2:506436/1‑150 (MQ=255) aTGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCg < 2:63220/150‑1 (MQ=255) gCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATACGGGATTTCCCGCAAGGCATGCACCTGCCCGGCGTaa > 2:740479/1‑149 (MQ=255) cATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGaa < 2:1809173/150‑1 (MQ=255) aTGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGAATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAAc > 1:773930/1‑150 (MQ=255) ggCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTgc < 1:1176176/150‑1 (MQ=255) gCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTgcg > 1:1283986/1‑150 (MQ=255) cTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTgcgc > 2:1010775/1‑150 (MQ=255) ggCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTcc < 1:422400/150‑1 (MQ=255) ttttGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATg > 2:775818/1‑150 (MQ=255) gcgcATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCt < 1:1867121/150‑1 (MQ=255) aTGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCaa > 2:1745370/1‑150 (MQ=255) aCCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTcc < 1:1887445/96‑1 (MQ=255) aCCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTcc > 2:1887445/1‑96 (MQ=255) cgccggcTGGGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCAc > 2:484926/7‑150 (MQ=255) cccGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCAc < 1:275451/150‑1 (MQ=255) cTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAg > 1:1179553/1‑150 (MQ=255) tGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAggac < 1:1536915/150‑3 (MQ=255) gggCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTg < 2:299740/150‑1 (MQ=255) gCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGt < 2:557520/150‑1 (MQ=255) gCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGAATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGt < 2:773930/150‑1 (MQ=255) aGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGGGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATg < 2:679946/80‑1 (MQ=255) aGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGGGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATg > 1:679946/1‑80 (MQ=255) aGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGcc < 1:1033866/114‑1 (MQ=255) aGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGcc > 2:1033866/1‑114 (MQ=255) tCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACa > 1:1048403/1‑127 (MQ=255) tCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACa < 2:1048403/127‑1 (MQ=255) cTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACAGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGc < 2:999019/150‑1 (MQ=255) ggCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAGCGGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCa < 1:1810162/150‑1 (MQ=255) ccTGCTCCAGTACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAGCAGGGGCTGGGCCGCCTGGTTGAACGGCCAGt > 2:1699265/1‑150 (MQ=255) ccTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGc > 1:114622/1‑103 (MQ=255) ccTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGc < 2:114622/103‑1 (MQ=255) cTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGtt > 2:197784/1‑150 (MQ=255) tGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACg < 1:78000/78‑1 (MQ=255) tGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACg > 2:78000/1‑78 (MQ=255) ccAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCa < 1:1172781/150‑1 (MQ=255) aGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGGCAGTTGCCCAgg < 2:1529146/150‑1 (MQ=255) gCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAgg > 1:765553/1‑149 (MQ=255) gCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAgg < 2:765553/149‑1 (MQ=255) ccTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGc > 2:568426/1‑150 (MQ=255) ccTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGc > 2:609370/1‑150 (MQ=255) cTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATg < 1:149083/57‑1 (MQ=255) cTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATg > 2:149083/1‑57 (MQ=255) ccTGGCATCGAGCTGCATCAGCGCATGCGGCATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCGTCCATGACCTGCAACCCCACCAACAGTTGCTATGCCGCCTGCTCGAACGGCTAGCTGTCTAGGTAGTTGCGAAGCtt > 2:100731/1‑150 (MQ=255) cTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCttt > 1:385726/1‑150 (MQ=255) cTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCAAGTTGCCCAGGTAGCTGCGAAGCttt < 1:506436/150‑1 (MQ=255) gCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTttgcc > 2:58433/1‑150 (MQ=255) gCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTttgcc < 1:740479/150‑1 (MQ=255) aTCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTttgccgt > 1:324933/1‑150 (MQ=255) aTCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTttgccgt > 1:1026555/1‑150 (MQ=255) aTCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTttgccgt > 1:1016126/1‑150 (MQ=255) cTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCcgc < 2:1283986/150‑1 (MQ=255) cTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCcgc < 1:1638900/150‑1 (MQ=255) gCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCCGCga < 2:385726/150‑1 (MQ=255) gCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCCGCga < 1:1699265/150‑1 (MQ=255) gCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCACACCAACAGGTGc > 1:1275697/1‑89 (MQ=255) gCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCACACCAACAGGTGc < 2:1275697/89‑1 (MQ=255) aTCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCCGCgaga > 1:657126/1‑150 (MQ=255) tCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCa < 2:1808617/117‑1 (MQ=255) tCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCa > 1:1808617/1‑117 (MQ=255) tCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCCGCGAGaa > 1:592136/1‑150 (MQ=255) tCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCCGCGAGaa > 2:1738345/1‑150 (MQ=255) cAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCCGCGAGAAc > 2:644153/1‑150 (MQ=255) tgccttGCGGGAAATCCCGCATGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAGGCt > 2:749429/6‑129 (MQ=255) tgccttGCGGGAAATCCCGCATGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAGGCt < 1:749429/124‑1 (MQ=255) gcgcATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCCGCGAGAACCt < 2:1179553/150‑1 (MQ=255) cgcATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCCGCGAGAACCtt < 2:1016126/150‑1 (MQ=255) cttGCGGGAAATCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTttgccgttgc > 1:401786/3‑136 (MQ=255) cttGCGGGAAATCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTttgccgttgc < 2:401786/134‑1 (MQ=255) cATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCCGCGAGAACCTTgg < 1:568426/150‑1 (MQ=255) aTGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCCGCGAGAACCTTGGt < 1:1307625/150‑1 (MQ=255) cGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAAc < 1:1580308/40‑1 (MQ=255) cGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAAc > 2:1580308/1‑40 (MQ=255) gATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGc > 1:1123348/1‑94 (MQ=255) gATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGc < 2:1123348/94‑1 (MQ=255) tttCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGaa < 2:535339/114‑1 (MQ=255) tttCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGaa > 1:535339/1‑114 (MQ=255) | GCCAGAGGTCACCCGCCCAGCACTCATGGCCATGGGCTCCGGCTTTTGCGCATGCACCCCGGCCTGCGCAACCTGCGCGGGCAGGTCGCTGGCCTGCTCCAGCACCTTGGCCAGCCTGGCATCGAGCTGCATCAGCGCATGCGGGATTTCCCGCAAGGCATGCACCTGCACGGCGTAGAACTGCGCTTCCATGGCCTGCAACCGCACCAACAGGTGCGAGGCCGCCTGGTTGAACGGCCAGTTGCCCAGGTAGCTGCGAAGCTTTGCCGTTGCCGCGAGAACCTTGGT > NC_002947/4560753‑4561040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |