| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,077,282 | G→T | 7.8% | intergenic (+29/+79) | PP_4470 → / ← mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,077,282 | 0 | G | T | 7.8% | 290.2 / 8.7 | 90 | intergenic (+29/+79) | PP_4470/mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter |
| Reads supporting (aligned to +/- strand): ref base G (39/44); new base T (3/4); total (42/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
TGTCCCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTG > NC_002947/5077138‑5077427 | tGTCCCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGc > 1:448062/1‑150 (MQ=255) ccTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGc > 2:616169/1‑150 (MQ=255) cTGCATGAGCGCGAGTTGCGGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCt < 1:745007/150‑1 (MQ=255) tGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCTTACGCTGGCtt < 2:285342/150‑1 (MQ=255) aTGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCttttt < 1:939144/150‑1 (MQ=255) tGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACAAAAAAGCCAGCTTACGCTGGCtttttc < 2:1891947/150‑2 (MQ=255) aGCGCGGGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTtgt > 2:1532216/1‑150 (MQ=255) gcgcGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGCATAAGCCAGCGTAAGCTGGCTTTTTtgtg < 1:52697/150‑1 (MQ=255) gcgcGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTtgtg > 2:482263/1‑150 (MQ=255) cgcgAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTgg < 1:1775128/150‑1 (MQ=255) gTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTc > 2:657540/1‑150 (MQ=255) ttGCTGCAGCGTTTCCGCCAACTGCCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCt < 1:605991/150‑1 (MQ=255) gctgcAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGa > 1:1064574/1‑150 (MQ=255) gcAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTg > 2:1278827/1‑150 (MQ=255) cAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGCCTGCTGGGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAAACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTgg < 1:100317/150‑1 (MQ=255) cAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTgg > 2:654123/1‑150 (MQ=255) cAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTgg > 2:288862/1‑150 (MQ=255) aGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGgc < 1:288862/150‑1 (MQ=255) tCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAg < 1:1532216/150‑1 (MQ=255) cGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGc > 1:1480223/1‑150 (MQ=255) gCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGcc < 2:1480223/150‑1 (MQ=255) gCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGcc > 1:1133653/1‑150 (MQ=255) ccAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGCGCTAGTCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTCTGGGCGTATGACTGGCAGCAAGGCCa > 1:1089275/1‑150 (MQ=255) ccAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGTGTCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGACGCCGTCTAACTGTCAGCAAGGGCa > 1:120931/1‑150 (MQ=255) ccAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCa > 2:1911784/1‑150 (MQ=255) gTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTccc > 1:920550/1‑150 (MQ=255) ccACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGc < 1:654123/150‑1 (MQ=255) cACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCg < 1:692722/150‑1 (MQ=255) cACCGACAGCAGAACGCTTTGGTCGCACTCATCGCTCATGATGTGGAAATGGCCGCAGACGCCTACTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGAGTGGCAGCAAGGCCATTTCCCTGCg < 2:394201/150‑1 (MQ=255) agcagAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGt > 2:1909879/1‑150 (MQ=255) agcagAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACAAAAAAGCCAGCTTACGCTGGCtttttc < 1:1232847/106‑2 (MQ=38) agcagAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACAAAAAAGCCAGCTTACGCTGGCtttttc > 2:1232847/1‑105 (MQ=38) agAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTcc < 1:482263/150‑1 (MQ=255) gAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGa < 1:1863687/114‑1 (MQ=255) gAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGa > 2:1863687/1‑114 (MQ=255) aaCGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCca > 2:1064325/1‑150 (MQ=255) aaCGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCca > 2:1541967/1‑150 (MQ=255) aCGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCcac < 2:1133653/150‑1 (MQ=255) cGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCcaca < 1:657540/150‑1 (MQ=255) gCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTgg > 2:790115/1‑102 (MQ=255) gCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTgg < 1:790115/102‑1 (MQ=255) ttGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGgga < 1:1541967/150‑1 (MQ=255) gCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACt < 2:1308484/103‑1 (MQ=255) gCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACt > 1:1308484/1‑103 (MQ=255) ccTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGAtt > 1:1430575/1‑147 (MQ=255) ccTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGAtt < 2:1430575/147‑1 (MQ=255) ccTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGc > 1:459229/1‑150 (MQ=255) cTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCCGCGGGATTGTTCCCACAGGGAGGATTGGCt > 1:793509/1‑150 (MQ=255) cATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCATCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTa < 1:1005183/150‑1 (MQ=255) cATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTa < 1:732984/150‑1 (MQ=255) aTCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTac < 1:616169/150‑1 (MQ=255) cTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCCGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaaca < 2:793509/150‑1 (MQ=255) tCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGTATTGTTCCCACAGGGAGGATTGGCTTACAACAg > 1:1583179/1‑150 (MQ=255) tCACGATGTGGAAATGGCCGCAGACGCCTACTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAg > 1:586806/1‑150 (MQ=255) tgtgGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAg > 1:1663116/1‑150 (MQ=255) tgGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTgg < 2:1312473/86‑1 (MQ=255) tgGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTgg > 1:1312473/1‑86 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTg > 1:1464160/1‑150 (MQ=255) gAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTg < 2:920550/150‑1 (MQ=255) aaTGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGc < 2:1064574/150‑1 (MQ=255) tGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCa < 2:1464160/150‑1 (MQ=255) ccGCAGACGCCTCCTGAGGGCTGCAGCGAACACAAAAAAGCCAGCTTACGCTgg < 2:1458174/54‑1 (MQ=21) ccGCAGACGCCTCCTGAGGGCTGCAGCGAACACAAAAAAGCCAGCTTACGCTgg > 1:1458174/1‑54 (MQ=21) cAGCCGCCTCCTGAGGGCTGCAGCGAACACAAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGGGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGCAAGAACGTGGCCAGCCTaa < 2:120931/150‑1 (MQ=255) cAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCTTGTCCAGCCCaa < 2:1089275/150‑1 (MQ=255) aGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGt > 2:552772/1‑101 (MQ=255) aGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGt < 1:552772/101‑1 (MQ=255) gACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAgg < 2:459229/150‑1 (MQ=255) aCGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCGATGTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGa > 1:1393743/1‑150 (MQ=255) cGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGaa < 1:1064325/150‑1 (MQ=255) ctcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAt > 1:152311/1‑150 (MQ=255) ctcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAt > 1:1371499/1‑150 (MQ=255) ctcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAt < 2:1583179/150‑1 (MQ=255) tcctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATg > 1:268521/1‑150 (MQ=255) ctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaa < 2:268521/150‑1 (MQ=255) ctGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaa < 2:1371499/150‑1 (MQ=255) gAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaaga < 2:1663116/150‑1 (MQ=255) gAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaaga > 1:343811/1‑150 (MQ=255) aGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGc > 1:1423552/1‑124 (MQ=255) aGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGc < 2:1423552/124‑1 (MQ=255) cGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGc < 2:965203/98‑1 (MQ=255) cGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGc > 1:965203/1‑98 (MQ=255) aaCACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAg < 2:233819/126‑1 (MQ=255) aaCACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAg > 1:233819/1‑126 (MQ=255) aaCACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTc < 1:1911784/150‑1 (MQ=255) ccacaaaaaaGCCAGCTTACGCTGGCTTTTTCGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCg > 2:1242793/6‑150 (MQ=255) acGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTg < 1:8948/112‑1 (MQ=255) acGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTg > 2:8948/1‑112 (MQ=255) gAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTca < 1:1909879/150‑1 (MQ=255) cAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTg < 2:586806/150‑1 (MQ=255) gTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaaca < 2:1535228/87‑1 (MQ=255) gTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaaca > 1:1535228/1‑87 (MQ=255) | TGTCCCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCGCAGACGCCTCCTGAGGGCTGCAGCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTG > NC_002947/5077138‑5077427 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |