| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,257,976 | G→A | 6.8% | intergenic (‑127/+17) | PP_4634 ← / ← PP_4635 | alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,257,976 | 0 | G | A | 6.8% | 340.8 / 10.6 | 118 | intergenic (‑127/+17) | PP_4634/PP_4635 | alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase |
| Reads supporting (aligned to +/- strand): ref base G (54/56); new base A (4/4); total (58/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.37e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
GCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTAACCGGCGTAGTCAGTCAGCTCGAACAGG > NC_002947/5257827‑5258122 | gCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCg > 2:642161/1‑150 (MQ=255) tGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAg < 2:571540/150‑1 (MQ=255) tGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAg < 2:275684/150‑1 (MQ=255) tGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAg < 2:1146884/150‑1 (MQ=255) gCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTAccc > 2:847888/1‑150 (MQ=255) gCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTAccc < 2:1204354/150‑1 (MQ=255) gCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTAccc > 1:1431461/1‑150 (MQ=255) acaaagacgtggccaccgatgtgaagttcgactgcgtcgagctgtaatcgggtaagcctgtactGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTAccc > 1:1585279‑M1/65‑150 (MQ=255) caaagacgtggccaccgatgtgaagttcgactgcgtcgagctgtaatcgggtaagcctgtactGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAg > 2:692738‑M1/64‑141 (MQ=255) caaagacgtggccaccgatgtgaagttcgactgcgtcgagctgtaatcgggtaagcctgtactGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAg < 1:692738‑M1/78‑1 (MQ=255) tACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGa < 2:181109/150‑1 (MQ=255) tCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGGGGGTGCCCCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTa < 1:34118/150‑1 (MQ=255) tCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTa < 1:847888/150‑1 (MQ=255) ccTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAg < 2:722420/150‑1 (MQ=255) tgttgttgtGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGc < 1:360627/139‑1 (MQ=255) gttgttgtGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCg > 1:553359/1‑150 (MQ=255) tgtgCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGAAGCAGTCGAACtt > 1:298496/1‑150 (MQ=255) gcCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACAt < 1:1102594/150‑1 (MQ=255) ccAAAACTAGCAAAGATTTTGTAGCCTGTACTTGCCTCTTAGCGGGAGAACCCGCTCCTACCGGGGGAGAACCTGTGGGAGCCGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATc > 1:1847989/1‑150 (MQ=39) cAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACCGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACATGCTTACCCGATTACAGCTCGACGCAGTCGaa < 2:1677715/140‑1 (MQ=255) cAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGaa > 1:1677715/1‑140 (MQ=255) cAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCg > 1:1250433/1‑150 (MQ=255) cTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGc < 2:298496/150‑1 (MQ=255) gCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGACCACAATATTAAAGCCATGGAGCTGGCGTTTTCGGGGTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCAc > 1:528454/1‑150 (MQ=255) aaaGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGt > 2:1398414/1‑150 (MQ=255) aaaGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGt > 1:1462823/1‑150 (MQ=255) aaaGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGt < 1:642161/150‑1 (MQ=255) aGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCt > 1:1119842/1‑150 (MQ=255) gATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACCGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCtt > 1:1428335/1‑150 (MQ=255) gggtaagcctgtaccggcctcttcgcgggcaagcccgctcccacaggttctccccctgtaggagcgggttcacccgcgaagaggccAGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGt > 1:1585279‑M2/87‑150 (MQ=255) gTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGt > 1:1479675/1‑150 (MQ=255) tAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTa < 1:1874402/150‑1 (MQ=255) aGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAg < 2:1250433/150‑1 (MQ=255) gCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGt > 2:47937/1‑150 (MQ=255) ctgtaccggcctcttcgcgggcaagcccgctcccacaggttctccccctgtaggagcgggttcacccgcgaagaggccAGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTg < 1:692738‑M2/63‑1 (MQ=255) ctgtaccggcctcttcgcgggcaagcccgctcccacaggttctccccctgtaggagcgggttcacccgcgaagaggccAGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTg > 2:692738‑M2/79‑141 (MQ=255) cTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCa > 1:95387/1‑133 (MQ=255) tACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACg > 1:1544775/1‑150 (MQ=255) tACTGGCCTCTTCGCGGGTGAACCCCCTCGTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACg < 1:1665222/150‑1 (MQ=255) gcctcttcgcgggcaagcccgctcccacaggttctccccctgtaggagcgggttcacccgcgaagaggccAGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTc > 2:1309519‑M2/71‑135 (MQ=255) gcctcttcgcgggcaagcccgctcccacaggttctccccctgtaggagcgggttcacccgcgaagaggccAGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTc < 1:1309519‑M2/65‑1 (MQ=255) GCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGt < 1:154471‑M1/104‑1 (MQ=255) CTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTg < 1:1500364‑M1/131‑1 (MQ=255) CTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTg > 2:1500364‑M1/1‑131 (MQ=255) tcttcgcgggcaagcccgctcccacaggttctccccctgtaggagcgggttcacccgcgaagaggccGGTACAGGCTTACCCGATTACa > 2:921720‑M2/68‑89 (MQ=255) tcttcgcgggcaagcccgctcccacaggttctccccctgtaggagcgggttcacccgcgaagaggccGGTACAGGCTTACCCGATTACa < 1:921720‑M2/22‑1 (MQ=255) tcttcgcgggcaagcccgctcccacaggttctccccctgtaggagcgggttcacccgcgaagaggccAGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAgcgcg > 2:358984‑M2/68‑150 (MQ=255) tcttcgcgggcaagcccgctcccacaggttctccaactgcaggcggaggttcacccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATGGGTGGCCACGGCTTTGTCGTAGTCAACGTCAgcgcg > 1:1792530‑M2/68‑150 (MQ=255) TTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGt < 2:1888517‑M1/129‑1 (MQ=255) TTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCt < 1:1309831‑M1/150‑1 (MQ=255) CGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGaa > 1:371624‑M1/1‑150 (MQ=255) ggcaagcccgctcccacaggttctccccctgtaggagcgggttcacccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGt > 1:730344‑M2/60‑123 (MQ=255) ggcaagcccgctcccacaggttctccccctgtaggagcgggttcacccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGt < 2:730344‑M2/64‑1 (MQ=255) tGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAg > 2:1632006/1‑126 (MQ=255) tGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAg < 1:1632006/126‑1 (MQ=255) aaCCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGaa < 2:1479675/150‑1 (MQ=255) aCCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACCTCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAAc < 2:273544/150‑1 (MQ=255) ccgctcccacaggttctccccctgtaggagcgggttcacccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAg > 1:1701675‑M2/53‑150 (MQ=255) ccGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTca > 2:1766380/1‑95 (MQ=255) ccGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTGGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAg > 2:1005712/1‑150 (MQ=255) cGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAAc < 2:1847417/90‑1 (MQ=255) cGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAAc > 1:1847417/1‑90 (MQ=255) cGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTCTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAgg < 2:1119842/150‑1 (MQ=255) gctcccacaggttctccccctgtaggagcgggcttgcccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGt > 1:630215‑M2/51‑150 (MQ=255) gCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGt > 1:1622902/1‑150 (MQ=255) ctcccacaggttctccccctgtaggagcgggttcacccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTa < 1:25791‑M2/68‑1 (MQ=255) cTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGTGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGtt < 1:1398414/150‑1 (MQ=255) cTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGtt > 2:1470124/1‑150 (MQ=255) tCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTg < 2:1462823/150‑1 (MQ=255) ccacaggttctccccctgtaggagcgggcttgcccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGcc > 2:461319‑M2/47‑100 (MQ=255) cTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAg < 2:1629413/150‑1 (MQ=255) caggttctccccctgtaggagcgggttcacccgcgaagaggccAGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGaa < 1:358984‑M2/107‑1 (MQ=255) aGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAAc > 1:1883177/1‑150 (MQ=255) gggggAGAACCCGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAg < 2:345160/110‑1 (MQ=255) gagaACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGctt < 2:1428335/150‑1 (MQ=255) gagaACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGctt > 2:231734/1‑150 (MQ=255) ctccccctgtaggagcgggttcacccgcgaagaggccAGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGctt < 2:1585279‑M2/113‑1 (MQ=255) tccccctgtaggagcgggttcacccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGcttc < 2:1701675‑M2/114‑1 (MQ=255) agaACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGcttc < 2:1544775/150‑1 (MQ=255) aaCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGcttctt < 2:1309831/150‑1 (MQ=255) cTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTg > 1:404455/1‑141 (MQ=255) cTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTg < 2:404455/141‑1 (MQ=255) tgtgGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTaa > 2:1638991/1‑150 (MQ=255) gtgGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTAAc < 1:1638991/150‑1 (MQ=255) ttggAGCCGGCGTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGGCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTAAcc < 2:377843/148‑1 (MQ=255) gAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTAACCGGc < 2:1431461/150‑1 (MQ=255) gAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTAACCGGc > 2:1355845/1‑150 (MQ=255) gAGCGGGCTTGCCCGCGAAGAGGCCGGTACAAGCTTACCCGATTACAGCCAGACGCAGTCCAACTTCACATCGGTGGCCACGTCTTTGTCGTTGTCAACGTCAGAGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTAACCgag > 1:377843/1‑148 (MQ=255) gtgcgcgcgaagaggccGGTACGGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCAAACAGGTTGAGGAACTGCTTCTTGTAACCGGCGTagtcag < 2:92932‑M2/133‑1 (MQ=255) ccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTcaca > 1:848325‑M2/14‑58 (MQ=255) ccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTcaca < 2:848713‑M2/45‑1 (MQ=255) ccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTcaca < 2:848325‑M2/45‑1 (MQ=255) ccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTcaca > 1:848713‑M2/14‑58 (MQ=255) ccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAAc < 2:1762189‑M2/108‑1 (MQ=255) ccgcgaagaggccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAAc > 1:1762189‑M2/14‑121 (MQ=255) gccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTc > 1:247466‑M2/4‑89 (MQ=255) gccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTc < 2:247466‑M2/86‑1 (MQ=255) gccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTAACCGGc > 1:311186‑M2/4‑128 (MQ=255) gccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTAACCGGc < 2:311186‑M2/125‑1 (MQ=255) gccGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTAACCGGCGTAGTCAGTCAGCTCGAACAgg > 2:191439‑M2/4‑150 (MQ=255) | GCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGGGAGAACCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTAACCGGCGTAGTCAGTCAGCTCGAACAGG > NC_002947/5257827‑5258122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |