| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,319,803 | C→T | 6.5% | intergenic (‑382/+27) | ilvI ← / ← PP_4681 | acetohydroxybutanoate synthase/acetolactate synthase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,319,803 | 0 | C | T | 6.5% | 228.1 / 3.9 | 77 | intergenic (‑382/+27) | ilvI/PP_4681 | acetohydroxybutanoate synthase/acetolactate synthase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (36/36); new base T (3/2); total (39/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
CTACAGCGGAAGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGCATTGGGC > NC_002947/5319654‑5319950 | ctACAGCGGAAGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGc < 1:1461038/150‑1 (MQ=255) aGCGGAAGTTGGATTGTTATGATTAGGCGCCAACAAGTCAAAAAAAATTATTGCCAATTTTTCCTCAAGAAGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCACAATTAAGAAAATTTCCAAAAAAAAGGGCCACA‑ATCTGCggcc > 2:715883‑M2/1‑146 (MQ=255) gTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACg > 1:498088/1‑150 (MQ=255) ttGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCgg < 2:1630750‑M2/140‑3 (MQ=255) ttGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCgg > 1:1630750‑M2/1‑138 (MQ=255) tGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGa > 1:1488064/1‑150 (MQ=255) ttCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGaaaaa < 1:754236/150‑1 (MQ=255) tgtgAGTCGGCGCCAACAAAGAAAAAAAAAATATGGCCAAATATGCAACAAGATGAATTCCAGCCACCACTAAAAATCGCTTCACCAGCACAATTAAAAAAAAAAAAAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTga < 2:659808/150‑1 (MQ=255) gATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTgaaga > 2:947541/1‑150 (MQ=255) cgcCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGTGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAgg > 2:1485024/1‑150 (MQ=255) gcCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCa < 2:1834506/147‑1 (MQ=255) gcCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCa > 1:1834506/1‑147 (MQ=255) ccAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCg > 2:162669/1‑150 (MQ=255) acaaGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑CTCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGaa > 2:598437/1‑150 (MQ=255) aaGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAgg > 2:738637/1‑150 (MQ=255) gTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAg < 1:738637/150‑1 (MQ=255) cacAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGTGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAg < 1:1485024/148‑1 (MQ=255) tCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGaa > 2:1332069/1‑145 (MQ=255) tCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGaa < 1:1332069/145‑1 (MQ=255) tCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGc > 1:1874208/1‑150 (MQ=255) aGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGAt < 2:1407217/150‑1 (MQ=255) aaaTTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAAt < 2:1488064/150‑1 (MQ=255) aaTTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAAtt < 1:162669/150‑1 (MQ=255) attattGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATAGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCGCA‑GATTGTggcccttttttttggaaatcttcttaattctgctgctgaagcgattttta > 1:427097‑M2/1‑100 (MQ=255) ttattGCCAATTTTCCCTCAACATAAATTCCTGCCATCACTAAAAATCGCAACAGCAAAACAATTAAGAAAATTTACAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGa < 2:1789131/150‑1 (MQ=255) ccAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCGCAGAT‑TGTggccctttttt > 1:820888‑M2/1‑93 (MQ=255) ccAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCGCA‑GATTGTggccctttttt < 2:820888‑M2/104‑12 (MQ=255) cAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAgg < 1:40353/123‑1 (MQ=255) cAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAgg > 2:40353/1‑123 (MQ=255) cAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGAAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAg > 2:837752/1‑150 (MQ=255) aaTTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGc > 2:1195463/1‑150 (MQ=255) ttttCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGc < 1:56364/150‑1 (MQ=255) cTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGAGCAAAAGCTGCCAACa > 2:1353294/1‑150 (MQ=255) tCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAg > 1:1082354/1‑150 (MQ=255) aGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAGATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAggcg < 1:1816189/150‑1 (MQ=255) aGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGc > 1:1921340/1‑111 (MQ=255) aGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGc < 2:1921340/111‑1 (MQ=255) gATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCAGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAggcgg > 1:947677/1‑150 (MQ=255) gATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCC‑AAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAggcggc < 2:620033/150‑1 (MQ=255) aTGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAggcggc > 1:146600/1‑150 (MQ=255) ttCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGCAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGa < 1:1393353/123‑1 (MQ=255) ttCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTgaa > 2:1266366/1‑94 (MQ=255) ttCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTgaa < 1:1266366/94‑1 (MQ=255) ttCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGa > 2:1393353/1‑123 (MQ=255) ccaccaCTAAAAATCTCTTCAACATCAAAATTAAAAAAAAAAAAAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCGGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGa < 2:786305/150‑1 (MQ=255) accacTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCGCAGAT‑TGTggcccttttttttgga > 1:1029498‑M2/1‑64 (MQ=255) accacTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCGCA‑GATTGTggcccttttttttgga < 2:1029498‑M2/80‑17 (MQ=255) cacTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACttt < 2:1874208/150‑1 (MQ=255) cacTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACttt > 1:1378529/1‑150 (MQ=255) acTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTg < 2:1378529/150‑1 (MQ=255) cTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGc > 1:504448/1‑150 (MQ=255) aaaaTCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAAtt < 2:380181/106‑1 (MQ=255) aaaaTCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAAtt > 1:380181/1‑106 (MQ=255) aTCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTccggc < 2:1082354/150‑1 (MQ=255) tCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCAGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggtcg < 2:947677/150‑1 (MQ=255) agcagcagAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggtcggt < 2:498088/150‑1 (MQ=255) cagcagAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTg < 1:603894/94‑1 (MQ=255) cagcagAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTg > 2:603894/1‑94 (MQ=255) cagAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggtcg < 2:470951/143‑1 (MQ=255) cagAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCcggtcg > 1:470951/1‑143 (MQ=255) aagaTTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGc > 2:1630771/1‑150 (MQ=255) agaTTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGAt < 2:62630/82‑1 (MQ=255) agaTTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGAt > 1:62630/1‑82 (MQ=255) aaaaaaaaGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGc > 1:663272/1‑84 (MQ=255) aaaaaaaaGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGc < 2:663272/84‑1 (MQ=255) aaaaaaaGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAgg > 1:808185/1‑150 (MQ=255) aaaaaGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGAt < 1:672040/150‑1 (MQ=255) aaaaGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATg < 1:1786083/150‑1 (MQ=255) aaGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGTCAt < 1:1115021/138‑1 (MQ=255) aaGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGTCAt > 2:1115021/1‑138 (MQ=255) gCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGAt < 2:146600/150‑1 (MQ=255) caca‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGc > 1:402026/1‑150 (MQ=255) tCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACa > 2:409752/1‑72 (MQ=255) tCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACa < 1:409752/72‑1 (MQ=255) cTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGTAGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGCATTggg < 2:1424632/150‑1 (MQ=255) cTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGCATTggg > 1:957193/1‑150 (MQ=255) tGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGCATTGGGc < 1:947541/150‑1 (MQ=255) tGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGCATTGGGc > 2:988301/1‑150 (MQ=255) | CTACAGCGGAAGTTGGATTCTTGTGATTCGGCGCCAACAAGTCAAGAAAAATTATTGCCAATTTTTCCTCAAGATGAATTCCTGCCACCACTAAAAATCGCTTCAGCAGCAGAATTAAGAAGATTTCCAAAAAAAAGGGCCACA‑ATCTGCGGCCCTTGACGGAAAAACTGAAGAAATCAGGCGGAAGGAGCGATCAATTGATCAAAAGCTGCCAACAGGCGGCGTAGCTCACGACTTTGCTCCGGCCGGTCGGTAAACACGGTTTCGGCCATGACAAGGATGCTCGATGCATTGGGC > NC_002947/5319654‑5319950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |