| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,427,963 | A→T | 6.0% | L63Q (CTG→CAG) | rhlE‑I ← | ATP‑dependent RNA helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,427,963 | 0 | A | T | 6.0% | 280.1 / 5.2 | 91 | L63Q (CTG→CAG) | rhlE‑I | ATP‑dependent RNA helicase |
| Reads supporting (aligned to +/- strand): ref base A (46/39); new base T (2/4); total (48/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACCCCGCCATACACCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTCCAGTTGCTG > NC_002947/5427816‑5428102 | aCCCCGCCATACACCGCGTAATTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCCCAACCTATCCTCGGATCGATTTTCTGGCCACCTTCTCGCCCTCCAGCGCCAgg < 1:824529/150‑1 (MQ=255)aCCCCGCCATACACCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGTGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAgg > 2:256598/1‑150 (MQ=255)aCCCCGCCATACACCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAgg > 2:1490507/1‑150 (MQ=255) cccGCCATACACCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGgcg > 2:1940860/1‑150 (MQ=255) acacCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCTGGCGCTggaggg < 1:1644026/150‑6 (MQ=255) cacCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGAGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGcac > 2:21380/1‑150 (MQ=255) acCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGcaca > 2:1905057/1‑150 (MQ=255) ccGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCAcag > 2:516468/1‑150 (MQ=255) ccGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCAcag < 1:934809/150‑1 (MQ=255) tAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCAcaggcagg > 2:1756816/1‑150 (MQ=255) agtagtCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGc > 1:1891036/1‑150 (MQ=255) tagtCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTgc > 2:895151/1‑134 (MQ=255) tagtCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTgc < 1:895151/134‑1 (MQ=255) tCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGTATTGCGCTGCAGCACAGGCAGGGCAAAGc < 1:1321864/150‑1 (MQ=255) tCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGc < 1:1065317/150‑1 (MQ=255) ggTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGGTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCt > 2:1857837/1‑150 (MQ=255) gTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCtt > 1:1516229/1‑150 (MQ=255) tctcGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGc > 1:696756/1‑150 (MQ=255) ctcGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGcc < 2:1891036/150‑1 (MQ=255) cGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCgg < 2:645206/150‑1 (MQ=255) ggCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCg > 1:411978/1‑148 (MQ=255) ggCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCg < 2:411978/148‑1 (MQ=255) gCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTa < 1:1940860/150‑1 (MQ=255) gcgcACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCAAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCAcaggcag > 2:632232/1‑117 (MQ=255) gcgcACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCAAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCAcaggcag < 1:632232/117‑1 (MQ=255) gcACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGc < 2:1906556/127‑1 (MQ=255) gcACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGc > 1:1906556/1‑127 (MQ=255) gttgttGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCTGGCGCTggag < 2:1106865/102‑1 (MQ=255) gttgttGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGc > 2:362521/1‑150 (MQ=255) gttgttGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCCCCAGCGCCTGGCGCTggag > 1:1106865/1‑99 (MQ=255) gCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCg > 2:1702229/1‑125 (MQ=255) gCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCg < 1:1702229/125‑1 (MQ=255) gCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCa < 1:1490507/150‑1 (MQ=255) cACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAg > 1:608161/1‑150 (MQ=255) ccTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGt > 1:537009/1‑150 (MQ=255) cTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGc < 1:1263364/119‑1 (MQ=255) cTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGc > 2:1263364/1‑119 (MQ=255) cTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTc > 1:156668/1‑150 (MQ=255) tCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGcgg > 1:962907/1‑150 (MQ=255) cGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGcggc < 2:1930774/150‑1 (MQ=255) ccAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGACAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGcggccgg < 1:1871473/150‑1 (MQ=255) cAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGcggccggc < 2:156668/150‑1 (MQ=255) cAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGcggccggc > 2:841954/1‑150 (MQ=255) cAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGcggccggc > 1:880879/1‑150 (MQ=255) tCGCGAGTGAGTACCAGCACCAAGGCGCGGATCGAGTGGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGc > 1:1568168/1‑150 (MQ=255) cgcgAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGcggc < 2:1148481/141‑1 (MQ=255) cgcgAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGcggc > 1:1148481/1‑141 (MQ=255) gcgAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTg > 1:1260870/1‑103 (MQ=255) gcgAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCCTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTg < 2:1260870/103‑1 (MQ=255) gTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCAcggcg < 2:537009/150‑1 (MQ=255) tGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCAcggcgg < 2:822503/150‑1 (MQ=255) gTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGa > 1:185364/1‑150 (MQ=255) gTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGa > 2:1817787/1‑150 (MQ=255) cAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGc > 2:1484883/1‑150 (MQ=255) aCCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCATCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTg < 1:21380/150‑1 (MQ=255) aCCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTg < 1:516468/150‑1 (MQ=255) aCCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTg < 1:256598/150‑1 (MQ=255) aCCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTg > 2:1693260/1‑150 (MQ=255) ccAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATc < 1:1344960/113‑1 (MQ=255) ccAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATc > 2:1344960/1‑113 (MQ=255) aaGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGcc < 1:1905057/150‑1 (MQ=255) aaGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGcc < 1:1023253/150‑1 (MQ=255) aGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCt > 1:160576/1‑150 (MQ=255) gATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcgg > 2:612532/1‑150 (MQ=255) aTCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCAt > 2:1808581/1‑101 (MQ=255) aTCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCAt < 1:1808581/101‑1 (MQ=255) tCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGa < 2:1772187/129‑1 (MQ=255) tCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGa > 1:1772187/1‑129 (MQ=255) aGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcggggtcg > 1:1291192/1‑150 (MQ=255) gCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcggggtcggggt < 2:880879/150‑1 (MQ=255) cTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTg < 2:1748171/80‑1 (MQ=255) cTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTg > 1:1748171/1‑80 (MQ=255) tGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTgg > 1:71840/1‑80 (MQ=255) tGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTgg < 2:71840/80‑1 (MQ=255) ggCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGggtggt < 2:160576/150‑1 (MQ=255) gCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGgtggtg > 2:387184/1‑150 (MQ=255) gCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGgtggtg < 2:962907/150‑1 (MQ=255) gCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGgtggtg < 1:480264/150‑1 (MQ=255) cACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTa > 2:1563490/1‑150 (MQ=255) cTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTc < 1:1202803/150‑1 (MQ=255) ttCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTcc > 2:1448542/1‑150 (MQ=255) tcGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGACATCAGGTCGAGGCCGCCCAGCACGGCGGTGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTCCAGt < 1:1693260/150‑1 (MQ=255) tcGCCCTCCAGCGCCAGGCGCTGAAGAACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTCCAGt < 1:1857837/150‑1 (MQ=255) gCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTGTTGCTGCACCGGGGTCGGGGTGGTGTAGTCCAGTtg > 2:1910544/1‑150 (MQ=255) cccTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTCCAGTtgc > 2:1671858/1‑150 (MQ=255) ccTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGggtgg < 1:1307372/135‑1 (MQ=255) ccTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGggtgg > 2:1307372/1‑135 (MQ=255) ctgcAGCGCCTGGCGCTGGAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGCGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGAAGTCCAGTtgctg > 1:398609/4‑150 (MQ=255) cTCCAGCGACTGGGCCTTGAGCTCAGGCAGGGCAAAGCCTGCGGTCTTGCCAGTACGGCTGTTGCGAACCGGGTTCAGGTCGCGGCCGTTCACCACGGCGGGGATGGCTTTGGGTTGCGCCGGGGTCGGGGTGGTGTAGTCCAGTtgctg < 1:1893600/150‑1 (MQ=255) gcCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcg < 2:1558731/115‑1 (MQ=255) gcCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACcg > 1:1558731/1‑115 (MQ=255) | ACCCCGCCATACACCGCGTAAGTAGTCAGCGGCAGGTTCTCGGCGTATTCGCGCACGTTGTTGTGCACCTGCTCGGCCAGCTCGCGAGTGGGTACCAGCACCAAGGCGCGGATCGAGTTGCTGGCCACCTTCTCGCCCTCCAGCGCCAGGCGCTGCAGCACAGGCAGGGCAAAGCCTGCGGTCTTGCCGGTACCGGTCTGGGCTGCGGCCATCAGGTCGCGGCCGGCCAGCACGGCGGGGATGGCTTTGGCCTGCACCGGGGTCGGGGTGGTGTAGTCCAGTTGCTG > NC_002947/5427816‑5428102 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |