| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,527,466 | T→G | 5.2% | Y311D (TAC→GAC) | PP_4860 → | mannose‑6‑phosphate isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,527,466 | 0 | T | G | 5.2% | 256.5 / 4.6 | 88 | Y311D (TAC→GAC) | PP_4860 | mannose‑6‑phosphate isomerase |
| Reads supporting (aligned to +/- strand): ref base T (41/42); new base G (3/2); total (44/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGCTGCGTGACACCCCGCTGCATGCGTCAATAGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAGGGATGACATGCCAT > NC_002947/5527317‑5527610 | tgctgcGTGACACCCCGCTGCATGCGTCAATAGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGt > 2:1398629/1‑150 (MQ=255) gACACCCCGCTGCATGCGTCAATAGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCgg < 2:158954/150‑1 (MQ=255) gtcatccctgctcaccgcgccgtcaccccctcggcactcataccagccggcgtcacgcaggaaccgcgctgaaagggcgcccaactgccccgcgagctttgcttcactgccttcacgcaatgtaagcgccCGCAGGC‑CGAGTACCTGCgg > 1:964658‑M1/131‑150 (MQ=255) ccccGCTGCATGCGTCAATAGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGgcgc < 1:1090982/150‑1 (MQ=255) cccGCTGCATGCGTCAATAGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCt < 1:561061/150‑1 (MQ=255) cGCTGCATGCGTCAATAGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTa > 2:771510/1‑150 (MQ=255) aTGCGTCAATAGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGc < 1:865102/150‑1 (MQ=255) ccgcgccgtcaccccctcggcactcataccagccggcgtcacgcaggaaccgcgctgaaagggcgcccaactgccccgcgagctttgcttcactgccttcacgcaatgtaagcgccCGCAGGC‑CGAGTACCTGCg > 2:865877‑M1/117‑135 (MQ=255) ccgcgccgtcaccccctcggcactcataccagccggcgtcacgcaggaaccgcgctgaaagggcgcccaactgccccgcgagctttgcttcactgccttcacgcaatgtaagcgccCGCAGGC‑CGAGTACCTGCg < 1:865877‑M1/19‑1 (MQ=255) gTCAATAGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGt > 2:1580465/1‑148 (MQ=255) gTCAATAGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGt < 1:1580465/148‑1 (MQ=255) aaTAGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAgg < 1:1702045/150‑1 (MQ=255) aTAGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAgg < 2:453198/149‑1 (MQ=255) aTAGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAgg > 1:453198/1‑149 (MQ=255) aGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGTGGCACGGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAg < 1:118848/150‑1 (MQ=255) cGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGc < 1:1636302/144‑1 (MQ=255) cGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGc > 2:1636302/1‑144 (MQ=255) cGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGaa < 1:713031/150‑1 (MQ=255) gggCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAg > 1:739734/1‑150 (MQ=255) ggCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGc < 1:1234541/150‑1 (MQ=255) tttCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCaaa > 2:1203865/1‑150 (MQ=255) tttGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTcgcg < 2:1272467/150‑1 (MQ=255) ttGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCgg < 2:1730851/150‑1 (MQ=255) tGCCGAGCAATTCGGGGTGAAGGATTCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCggg < 1:8023/150‑1 (MQ=255) gCCGAGCAATTCGGGGTGAACGATGCGGCCCTAATGG‑CAAGCTGTAATTTGGATTGCCGTGTGCTTGATGACTCTCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCgggg < 1:1398629/150‑1 (MQ=255) aaTTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGATCAAATTCGAGCAAAGCTCGCGGGGCAGTTgg < 1:1021371/150‑1 (MQ=255) aTTCGGGGTGAAGGATGCGTCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCGGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTggg < 1:1688589/150‑1 (MQ=255) gggTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGTCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGccc > 1:425094/1‑150 (MQ=255) gggTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGccc < 2:739734/150‑1 (MQ=255) aaGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCa > 2:361041/1‑150 (MQ=255) aGGATGCGGCCGTACTGGCCATGATG‑AATGTGGCTGCCGGTGTCTTTGAGACCGCCCTGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAg < 1:1398452/150‑1 (MQ=255) ggATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAgc > 2:1762482/1‑150 (MQ=255) gATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGGATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAgcg > 1:1267931/1‑150 (MQ=255) gcatggCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAgcgc > 2:1334196/5‑150 (MQ=255) gCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCgg < 1:1117852/150‑1 (MQ=255) ggCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGtt > 1:684667/1‑150 (MQ=255) tACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGTCTCCCTGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGc < 2:425094/150‑1 (MQ=255) cTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGt < 1:1334196/150‑1 (MQ=255) ggCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGa < 2:684667/150‑1 (MQ=255) gCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCgg < 1:1883156/72‑1 (MQ=255) gCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCgg > 2:1883156/1‑72 (MQ=255) gCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGgcgc > 2:487905/1‑76 (MQ=255) gCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGgcgc < 1:487905/76‑1 (MQ=255) ccATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACg > 1:1390629/1‑150 (MQ=255) cATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGc < 1:361041/150‑1 (MQ=255) tG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGc < 1:397407/108‑1 (MQ=255) tG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGc > 2:397407/1‑108 (MQ=255) g‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTg > 2:578040/1‑150 (MQ=255) aaTGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTgg > 2:1830827/1‑150 (MQ=255) aaTGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGCACAGATGGGCGCCCTGTCATCGCGGTTCCTGCGTGAAGAAGGCTgg > 2:1287856/1‑150 (MQ=255) tgtgGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTa < 1:771510/150‑1 (MQ=255) tgGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGgc < 2:1090558/110‑1 (MQ=255) tgGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGGGAAGCAAAGCTCGCGGGGCAGTTGGgc > 1:1090558/1‑110 (MQ=255) gATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGt < 1:167141/132‑1 (MQ=255) gATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGt > 2:167141/1‑132 (MQ=255) tGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGCATGAGTg > 2:894990/1‑150 (MQ=255) ccGGGTGCTTGATGCCTCCCCGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCg > 2:320968/1‑150 (MQ=255) ggTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAgg > 1:1694298/1‑150 (MQ=255) tGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAgggg > 2:1891149/1‑150 (MQ=255) cTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGt > 1:1349307/1‑150 (MQ=255) gccttcacgcaatgtaagcgccCGCAGGTACTCGG‑CCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGa > 1:1646325‑M1/23‑134 (MQ=255) gccttcacgcaatgtaagcgccCGCAGGTACTCGG‑CCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGa < 2:1646325‑M1/112‑1 (MQ=255) cTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGgcgc < 2:1694298/150‑1 (MQ=255) tggcAGTGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGcgcg > 2:520133/4‑150 (MQ=255) tCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGc > 1:342109/1‑132 (MQ=255) tCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGc < 2:342109/132‑1 (MQ=255) tCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAgggg > 2:1146687/1‑139 (MQ=255) tCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAgggg < 1:1146687/139‑1 (MQ=255) gcaatgtaagcgccCGCAGGTACTCGG‑CCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCa < 2:24456‑M1/80‑1 (MQ=255) gcaatgtaagcgccCGCAGGTACTCGG‑CCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCa > 1:24456‑M1/15‑94 (MQ=255) ccAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGt < 1:364458/150‑1 (MQ=255) ccAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGt > 2:686063/1‑150 (MQ=255) cAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTGCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTg > 1:1163992/1‑150 (MQ=255) cAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTg > 2:1124197/1‑150 (MQ=255) aGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTgg < 1:1830827/150‑2 (MQ=255) aGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGa > 1:276036/1‑150 (MQ=255) gCGTATCTGGGCGCAGGC‑CGAGGACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAg > 1:1441072/1‑150 (MQ=255) tCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAggg < 1:1891149/150‑1 (MQ=255) tCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAggg < 1:191341/150‑1 (MQ=255) tCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAggg > 2:736514/1‑150 (MQ=255) tGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAGGGAt < 1:686063/150‑1 (MQ=255) gggCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAgcgc < 1:1631191/87‑1 (MQ=255) gggCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAgcgc > 2:1631191/1‑87 (MQ=255) gcgcAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAGGGATGAc > 2:463963/1‑150 (MQ=255) CGCAGGC‑CGAGTACCTGGGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAGGGATGACa > 2:1267931‑M1/1‑150 (MQ=255) GGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTGTGAGTGCCGAGAGGGGGACGGCGCGGTGAGCAGGGATGACATGcc < 2:148837‑M1/150‑1 (MQ=255) GGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAGGGATGACATGcc > 1:1124197‑M1/1‑150 (MQ=255) GC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAGGGATGACATGCCa < 2:98873‑M1/150‑1 (MQ=255) c‑cGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAGGGATGACATGCCAt > 1:1849358/1‑150 (MQ=255) | TGCTGCGTGACACCCCGCTGCATGCGTCAATAGACCGGGCTTTCGCCTTTGCCGAGCAATTCGGGGTGAAGGATGCGGCCGTACTGGCCATGCTG‑AATGTGGATGGCCGGGTGCTTGATGCCTCCCAGCGTATCTGGGCGCAGGC‑CGAGTACCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAGGGATGACATGCCAT > NC_002947/5527317‑5527610 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |