| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,529,408 | C→G | 12.8% | intergenic (‑574/+20) | ydfG ← / ← livF‑II | bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,529,408 | 0 | C | G | 12.8% | 264.0 / 27.2 | 92 | intergenic (‑574/+20) | ydfG/livF‑II | bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (40/40); new base G (5/7); total (45/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01 | |||||||||||
GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGTTGGC > NC_002947/5529263‑5529556 | gCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGATAAAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGctgcactgca < 1:612568/150‑1 (MQ=255) gATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGc < 1:814722/150‑1 (MQ=255) atatGCCACCATGTTTTCAACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcc > 2:1766388/1‑150 (MQ=255) tatGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGccc < 1:1937957/150‑1 (MQ=255) tGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGCAGGAATATGGGTGTGTTTCGGGAGAAGGGCACGACAAGTGTTCCACATTGAGAAGGCGGCTGCACTGCAGCCCCt > 2:301575/1‑150 (MQ=255) ccccaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAGGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCAGTGCAGcccccttc < 1:415338/148‑5 (MQ=255) caccaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGTTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTaa < 1:1509025/150‑1 (MQ=255) caccaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTaa < 1:1230859/150‑1 (MQ=255) caccaTGTTTTCCACACGCGGCTCCACACTATCCGTGGAAAAAAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCAGTGCAGcccccttc < 1:415626/150‑5 (MQ=255) accaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCAGTGCAGccccctt < 1:109847/148‑4 (MQ=255) accaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCAGTGCAGCCCCttt > 2:109847/1‑147 (MQ=255) accaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAac > 1:1520654/1‑150 (MQ=255) ccaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAaca > 1:800544/1‑150 (MQ=255) tGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACaa < 2:800544/150‑1 (MQ=255) ttCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCa < 1:845782/150‑1 (MQ=255) tCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAg > 1:1795661/1‑150 (MQ=255) ccACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGt > 1:135122/1‑150 (MQ=255) cacaGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCAGTGCAGccccctt > 2:1715952/1‑134 (MQ=255) cacaGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCAGTGCAGccccctt < 1:1715952/137‑4 (MQ=255) cacaGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAaca < 1:143445/140‑1 (MQ=255) cacaGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAaca > 2:143445/1‑140 (MQ=255) cacaGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTg > 1:1549769/1‑150 (MQ=255) cacaGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTg > 1:1648383/1‑150 (MQ=255) acaGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTgc > 2:1187177/1‑150 (MQ=255) caGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTgc < 2:1375983/149‑1 (MQ=255) caGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTgc > 1:1375983/1‑149 (MQ=255) aGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTgccc > 2:1783290/1‑150 (MQ=255) ggcggcTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCAGTGCAGcccc < 2:1598234/130‑1 (MQ=255) ggcggcTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCAGTGCAGcccc > 1:1598234/1‑130 (MQ=255) ggcTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTgcccgccc < 1:1926306/150‑1 (MQ=255) cacaCTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcccc < 1:923904/122‑1 (MQ=255) cacaCTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcccc > 2:923904/1‑122 (MQ=255) acacTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCATTAACACAACTCAGTGCCCGCCCAGATaa < 2:1089363/150‑1 (MQ=255) cacTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAg < 2:115903/150‑1 (MQ=255) aTCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGCACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGtt < 2:247203/150‑1 (MQ=255) tCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTa < 1:1557970/150‑1 (MQ=255) gTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGc > 1:1317854/1‑150 (MQ=255) gTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGc > 2:1526486/1‑150 (MQ=255) tGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCa < 2:1549769/150‑1 (MQ=255) gAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACGGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACt > 1:1529095/1‑150 (MQ=255) gAAAAGAGTTGGCATGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTTGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACt < 1:1850842/150‑1 (MQ=255) gTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCAt < 1:1526486/150‑1 (MQ=255) ttGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcccc < 1:1633825/101‑1 (MQ=255) ttGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcccc > 2:1633825/1‑101 (MQ=255) ttGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCAtt > 1:1349996/1‑150 (MQ=255) gCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAc < 2:1520654/150‑1 (MQ=255) cTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTc < 1:565394/142‑1 (MQ=255) cTGTGGAAACAATGGCTTGCGAAGGAATATGGGCGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTc > 2:565394/1‑142 (MQ=255) tgGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACa < 2:1795661/150‑1 (MQ=255) aaaCAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGtt > 2:1722487/1‑150 (MQ=255) aaTGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGc > 1:303796/1‑83 (MQ=255) aaTGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGc < 2:303796/83‑1 (MQ=255) aaTGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTg > 2:617792/1‑150 (MQ=255) tGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcc > 2:45163/1‑150 (MQ=255) tGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcc < 2:1648383/150‑1 (MQ=255) ggCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGccc < 1:1793507/150‑1 (MQ=255) ggCTTGAGAAGGAAGATGGGGGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGccc > 2:1044197/1‑150 (MQ=255) cTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAc < 1:553919/133‑1 (MQ=255) cTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAc > 2:553919/1‑133 (MQ=255) gAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccggtcccg > 1:1462252/1‑150 (MQ=255) aaGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAcc > 1:403783/1‑128 (MQ=255) aaGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAcc < 2:403783/128‑1 (MQ=255) tGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGa > 2:855104/1‑150 (MQ=255) ggTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAcc > 2:10800/1‑118 (MQ=255) ggTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAcc < 1:10800/118‑1 (MQ=255) gtgtgtTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATc > 1:888415/1‑150 (MQ=255) tgtgtTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCt < 1:1187177/150‑1 (MQ=255) gtTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGcc < 1:45163/150‑1 (MQ=255) tttCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGccc < 1:1722487/150‑1 (MQ=255) aaGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACCGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCAt < 1:301575/150‑1 (MQ=255) aGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCa < 2:1466080/96‑1 (MQ=255) aGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCa > 1:1466080/1‑96 (MQ=255) ggAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATcac > 1:309748/1‑150 (MQ=255) ggAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATcac > 2:1619699/1‑150 (MQ=255) gAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATcaca < 1:1619699/150‑1 (MQ=255) gAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATcaca < 1:855104/150‑1 (MQ=255) gACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTc < 2:892969/103‑1 (MQ=255) gACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTc > 1:892969/1‑103 (MQ=255) cAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATAACATAGGcc > 1:173927/1‑150 (MQ=255) tttCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTc < 2:135122/150‑1 (MQ=255) ccACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccggtcccggt < 2:155509/108‑1 (MQ=255) ccACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccggtcccggt > 1:155509/1‑108 (MQ=255) acaTTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGc > 1:1339119/1‑111 (MQ=255) acaTTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGc < 2:1339119/111‑1 (MQ=255) aTTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGt > 2:1098152/1‑150 (MQ=255) ttaaggggCTGCAGTGCAGCCCCTTAACACAACTCAGTGCACGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGc < 2:1038062/100‑1 (MQ=255) ttaaggggCTGCAGTGCAGCCCCTTAACACAACTCAGTGCACGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGc > 1:1038062/5‑104 (MQ=255) gaAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAg < 1:1098152/150‑1 (MQ=255) aaGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAgc > 1:249599/1‑150 (MQ=255) ggggCTGCAGTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCa > 2:232054/1‑66 (MQ=255) ggggCTGCAGTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCa < 1:232054/66‑1 (MQ=255) ggCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATg > 1:1358665/1‑150 (MQ=255) gCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGTCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATgg < 2:1349996/150‑1 (MQ=255) actgcaGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGTTGGc > 2:609144/1‑150 (MQ=255) | GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGTTGGC > NC_002947/5529263‑5529556 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |