Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,577,398 C→G 5.1% L357V (CTG→GTG)  PP_4906 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,577,3980CG 5.1% 253.2 / 4.7 79L357V (CTG→GTG) PP_4906hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (40/35);  new base G (2/2);  total (42/37)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.77e-01

GCCCGCCGCCACGCCCGGCACGCCCTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGCAGCAAATTGCCGGCC  >  NC_002947/5577251‑5577545
                                                                                                                                                   |                                                                                                                                                   
gcccgccGCCACGCCCGGCACGCCCTGTTCAACCCGACCGTGGCCGTGGCCTTGCTGTGGCAGCGAGGCCGCCATCACGCGGACATGCTGGCGAGTGCACCGCCCAGCATCGACCACCTGGGACGCCGGCTCACATTATGCCAGCACctg                                                                                                                                                   >  2:802451/1‑150 (MQ=255)
  ccgccgCCACGCCCGGCACGCCCTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCCCCGCCCAGCAGCGACGACCTGGCACGCTGGCCCACATTGTGCCAGCACctgct                                                                                                                                                 >  2:325567/1‑150 (MQ=255)
  ccgccgCCACGCCCGGCACGCCCTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACctgct                                                                                                                                                 >  2:1256013/1‑150 (MQ=255)
  ccgccgCCACGCCCGGCACGCCCTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACctgct                                                                                                                                                 >  1:142730/1‑150 (MQ=255)
  ccgccgCCACGCCCGGCACGCCCTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACctg                                                                                                                                                   <  2:1008645/148‑1 (MQ=255)
  ccgccgCCACGCCCGGCACGCCCTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACctg                                                                                                                                                   >  1:1008645/1‑148 (MQ=255)
    gccgccACGCCCGGCACGCCCTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTgg                                                                                                                                               <  2:364296/150‑1 (MQ=255)
     ccgccccgccCGTCACGCCCTGTCCCACCCGGCCGAGGCCTTGATCGGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCTACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGc                                                                                                                                              <  2:939211/150‑1 (MQ=255)
        ccACGCCCGGCACGCCCTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCa                                                                                                                                           >  2:1779544/1‑150 (MQ=255)
        ccACGCCCGGCACGCCCTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCa                                                                                                                                           >  1:1132986/1‑150 (MQ=255)
          aCGCCCGGCACGCCCTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCAGGTGCTGGCACaat                                                                                                                                         <  1:1272904/150‑2 (MQ=255)
             cccGGCACGCCCTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCa                                                                                                                                      <  1:1659225/150‑1 (MQ=255)
                 gCACGCCCTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGccc                                                                                                                                  <  1:1256013/150‑1 (MQ=255)
                       ccTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCAc                                                                                                                            >  1:88097/1‑150 (MQ=255)
                                cccGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGt                                                                                                                   >  2:1566170/1‑150 (MQ=255)
                                  cGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGc                                                                                                                 >  1:1442936/1‑150 (MQ=255)
                                    gCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGCAGTCCTGGCACGCTTGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCAc                                                                                                               <  1:1206347/150‑1 (MQ=255)
                                      tgAGGCCTTGATCTGGCTGTGTCATCCACTCCGCCCTTACCCGGACATGCTGGCCCCGCCTCCACCCAGCAGCGCCGCTCTGGCACGCTGGCGCACATTGTGCTAGCACCTGCTGCCCCCATCCAGTCCGTTCACCAACGCCGTGCACCt                                                                                                             <  2:283134/149‑1 (MQ=255)
                                      cGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCt                                                                                                             <  1:302424/150‑1 (MQ=255)
                                       gAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCAc                                                                                                               >  2:1051013/1‑147 (MQ=255)
                                       gAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTg                                                                                                            >  1:658175/1‑150 (MQ=255)
                                       gAGGCCGTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCAc                                                                                                               <  1:1051013/147‑1 (MQ=255)
                                         ggCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGc                                                                                                          <  1:842282/150‑1 (MQ=255)
                                           ccTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCa                                                                                                        >  1:752562/1‑150 (MQ=255)
                                            cTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCAc                                                                                                       >  2:1309215/1‑150 (MQ=255)
                                               gATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCa                                                                                                    >  1:428613/1‑150 (MQ=255)
                                                aTCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAg                                                                                                   <  2:88097/150‑1 (MQ=255)
                                                  cTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGc                                                                                                 <  2:1132986/150‑1 (MQ=255)
                                                    ggCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGccc                                                                                               <  1:1190872/150‑1 (MQ=255)
                                                     gCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCa                                                                                              >  1:653959/1‑150 (MQ=255)
                                                         tGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCaagaa                                                                                          <  1:1779544/150‑1 (MQ=255)
                                                           gCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGc                                                                                        <  1:1566170/150‑1 (MQ=255)
                                                            cACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGcc                                                                                       <  2:428613/150‑1 (MQ=255)
                                                            cACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCAAACCCAGCACGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGcc                                                                                       <  1:802451/150‑1 (MQ=255)
                                                             aCCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGccc                                                                                      >  1:1071795/1‑150 (MQ=255)
                                                             aCCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGccc                                                                                      >  2:86490/1‑150 (MQ=255)
                                                             aCCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGccc                                                                                      >  1:1498150/1‑150 (MQ=255)
                                                                aaCGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCctgc                                                                                   <  1:1813573/150‑1 (MQ=255)
                                                                 aCGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCctgct                                                                                  <  1:1026244/150‑1 (MQ=255)
                                                                        ccTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGc                                                                           >  1:1057455/1‑150 (MQ=255)
                                                                         cTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCg                                                                          >  2:1473521/1‑150 (MQ=255)
                                                                             cccGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCACCCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCAt                                                                      <  2:117419/150‑1 (MQ=255)
                                                                              ccGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATg                                                                     >  2:1059964/1‑150 (MQ=255)
                                                                                ggACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCa                                                                   >  2:250509/1‑150 (MQ=255)
                                                                                  aCATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAAc                                                                 <  1:250509/150‑1 (MQ=255)
                                                                                  aCATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAAc                                                                 <  2:658175/150‑1 (MQ=255)
                                                                                  aCATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCAACCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAAc                                                                 <  1:1502791/150‑1 (MQ=255)
                                                                                   cATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACg                                                                >  1:1056843/1‑150 (MQ=255)
                                                                                    aTGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGNACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGc                                                               >  1:702838/1‑150 (MQ=255)
                                                                                     tGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAAc                                                                 >  2:280717/1‑147 (MQ=255)
                                                                                     tGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAAc                                                                 <  1:280717/147‑1 (MQ=255)
                                                                                       cTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGcatc                                                            <  2:421486/150‑1 (MQ=255)
                                                                                         ggCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGcatcat                                                          >  1:1483408/1‑150 (MQ=255)
                                                                                          gCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCAtg                                                         <  2:653959/150‑1 (MQ=255)
                                                                                            cccGCCACCGCTCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCGAACCCCGCCAGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGACCTGCGGCATGGAACGCATCAtgct                                                       >  2:1640666/1‑150 (MQ=255)
                                                                                            cccGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCctgc                                                                                   <  1:1049783/122‑1 (MQ=255)
                                                                                            cccGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCctgc                                                                                   >  2:1049783/1‑122 (MQ=255)
                                                                                            cccGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCAGCATGCAACGCATCAtgct                                                       >  2:1272215/1‑150 (MQ=255)
                                                                                             ccGCCACCGCCCAGCCGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCGCCTACTGGACCAACCCAGCACGTTCACCAACGCCGTGCACGTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCAtgctg                                                      >  1:776540/1‑150 (MQ=255)
                                                                                             ccGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCAtgctg                                                      >  2:1607487/1‑150 (MQ=255)
                                                                                               gCCACCGCCCAGCAGCGACGACCTGGCACGCTTGCGCACATTGTGCCAGCACCTGCTGGCCCAACACAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGATGGCCTGCGGCATGCAACGCATCATgctgct                                                    >  1:727033/1‑150 (MQ=255)
                                                                                                  actgCCCATCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAg                                                 >  2:327991/4‑150 (MQ=255)
                                                                                                   ccGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGc                                                <  2:1682936/150‑1 (MQ=255)
                                                                                                    cGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGcc                                               <  2:1056843/150‑1 (MQ=255)
                                                                                                     gCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCt                                              >  1:57709/1‑150 (MQ=255)
                                                                                                     gCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCACGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATCCTGATAAGccg                                              <  2:1935665/150‑2 (MQ=255)
                                                                                                            agcGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAg                                       <  2:1268169/150‑1 (MQ=255)
                                                                                                                  gacCTGGCACGCTGGCGCACATCGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGc                                 <  1:1844570/150‑1 (MQ=255)
                                                                                                                     cTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGAc                              <  2:1071795/150‑1 (MQ=255)
                                                                                                                      tGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACt                             <  2:142730/150‑1 (MQ=255)
                                                                                                                        gCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTAc                           >  2:753903/1‑150 (MQ=255)
                                                                                                                          ccGCTGGCGCACATTGTGCCCGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCt                         <  2:1643481/149‑1 (MQ=255)
                                                                                                                          aCGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCt                         >  1:868406/1‑150 (MQ=255)
                                                                                                                                gcgcACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGt                   >  2:1914931/1‑150 (MQ=255)
                                                                                                                                gcgcACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGt                   >  1:615334/1‑150 (MQ=255)
                                                                                                                                  gcACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTAACTGCGCGTgc                 >  2:194208/1‑150 (MQ=255)
                                                                                                                                   cacaTTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTgca                >  1:607608/1‑150 (MQ=255)
                                                                                                                                      aTTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTgcagca             >  2:586612/1‑150 (MQ=255)
                                                                                                                                       ttGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGCAGCaa            >  1:1515723/1‑150 (MQ=255)
                                                                                                                                       ttGGGCCAGCAGGTGCTGGCACAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTAc                           <  1:747382/135‑1 (MQ=255)
                                                                                                                                       ttGGGCCAGCAGGTGCTGGCACAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTAc                           >  2:747382/1‑135 (MQ=255)
                                                                                                                                       ttGGGCCAGCAGGTGCTGGCACAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGCAGCaa            >  2:935977/1‑150 (MQ=255)
                                                                                                                                               gCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGCAGCAAATTGc       >  1:1314295/1‑147 (MQ=255)
                                                                                                                                               gCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGCAGCAAATTGc       <  2:1314295/147‑1 (MQ=255)
                                                                                                                                                 aCCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGCAGCAAATTGCCGGcc  >  1:1860237/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GCCCGCCGCCACGCCCGGCACGCCCTGTTCCACCCGGCCGAGGCCTTGATCTGGCCGTGGCACCAACGCCGCCCTCACCCGGACATGCTGGCCCCGCCACCGCCCAGCAGCGACGACCTGGCACGCTGGCGCACATTGTGCCAGCACCTGCTGGCCCAACCCAGCCCGTTCACCAACGCCGTGCACCTGGCCACCCAGGCCCAAGAAGCCCTGCTGGCCTGCGGCATGCAACGCATCATGCTGCTCAGCCTGGACAAGGCCAGCGACTACCTGCGCGTGCAGCAAATTGCCGGCC  >  NC_002947/5577251‑5577545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑