| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,610,088 | C→A | 84.5% | E160* (GAA→TAA) | PP_4929 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,610,088 | 0 | C | A | 84.5% | 219.8 / 35.4 | 98 | E160* (GAA→TAA) | PP_4929 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (6/9); new base A (40/42); total (46/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 | |||||||||||
TTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGA > NC_002947/5609942‑5610227 | ttgtGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTg < 2:1922327/150‑1 (MQ=255)ttgtGGCGTGATCAGCAACTGCACATTTCGGGTCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCACTCCAAGGAAGCCGGGATGCTTTAGTg < 1:492084/150‑1 (MQ=255) gtgGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTgga < 1:1386858/150‑1 (MQ=255) gtgGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTgga < 1:55021/150‑1 (MQ=255) gtgGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTgga < 1:401248/150‑1 (MQ=255) tgGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTggag < 2:1190295/150‑1 (MQ=255) gCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTggagga > 1:1770832/1‑150 (MQ=255) gATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGgaagaa < 1:163131/150‑1 (MQ=255) aTCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAAc < 1:1751802/150‑1 (MQ=255) aTCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAAc > 1:1629350/1‑150 (MQ=255) cAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAg < 2:135097/150‑1 (MQ=255) cAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACCGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAg < 1:1169226/150‑1 (MQ=255) aGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAgg > 1:1641024/1‑150 (MQ=255) aGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAgg > 1:204216/1‑150 (MQ=255) aGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAgg > 1:1501239/1‑150 (MQ=255) gCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGTTGCCCAACGCACGGCGCTCCAAGGCAGCAGGGATGCTTTAGTGGAGGAAGAACAGGc < 1:676969/150‑1 (MQ=255) gCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGc < 1:1283615/150‑1 (MQ=255) gCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGc > 1:71815/1‑150 (MQ=255) aaCTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGccc < 2:594834/150‑1 (MQ=255) ccGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATc > 2:288631/1‑150 (MQ=255) gCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGgcgcg > 2:1749944/1‑150 (MQ=255) cGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGgcgcgc < 1:1103695/150‑1 (MQ=255) aTTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTcca < 2:1770832/150‑1 (MQ=255) ttgttgGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCACACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTg < 1:69428/114‑1 (MQ=255) ttgttgGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCACACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTg > 2:69428/1‑114 (MQ=255) gttgGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTccacca < 2:1003532/150‑1 (MQ=255) ttgGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAg > 1:1721555/1‑150 (MQ=255) ttgGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAg > 2:421256/1‑150 (MQ=255) ggCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGGTTTAGTGGAGGAAGAACAGGCCCa > 2:1298473/1‑126 (MQ=255) ggCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCa < 1:1298473/126‑1 (MQ=255) cGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCACCACGCTGTGCAACGCACCGCGATCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTg < 1:137229/150‑1 (MQ=255) gggTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCTCTCCACCAGCTTgc < 2:664938/150‑1 (MQ=255) gTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTgcgc < 2:265963/150‑1 (MQ=255) gTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGATTTGGTTGATGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTgcgc < 1:338802/150‑1 (MQ=255) ccGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCcac > 2:1563580/1‑150 (MQ=255) cGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTGCAAGTAAGCCGGGGTGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCcaca > 1:1260103/1‑150 (MQ=255) gCCTTCCCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATc > 2:1273388/1‑150 (MQ=255) cTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGc > 1:1591688/1‑150 (MQ=255) ttCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCt < 2:894300/134‑1 (MQ=255) ttCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCt > 1:894300/1‑134 (MQ=255) ttCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGcc > 1:534870/1‑150 (MQ=255) ttCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGcc > 2:1461691/1‑150 (MQ=255) tcccccgccAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGccc < 1:1273388/147‑1 (MQ=255) gcccgccAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTg > 2:1000350/1‑150 (MQ=255) gcccgccAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTg < 2:534870/150‑1 (MQ=255) gcccgccAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTg < 1:741109/150‑1 (MQ=255) cgccAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCATTAGAGGAGGACGTAACTATCCAGATCTCCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGc > 1:1400591/1‑150 (MQ=255) gccAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCt > 2:1768732/1‑150 (MQ=255) ccAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTc > 2:1066238/1‑150 (MQ=255) aGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGcc < 1:552233/140‑1 (MQ=255) aGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGcc > 2:552233/1‑140 (MQ=255) gCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGc < 1:858220/150‑1 (MQ=255) ggTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTcca < 2:1839083/114‑1 (MQ=255) ggTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTcca > 1:1839083/1‑114 (MQ=255) ggCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCa > 2:514394/1‑150 (MQ=255) gCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAg > 1:1211470/1‑150 (MQ=255) cGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGtt < 2:1211470/150‑1 (MQ=255) cgcgCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCAAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCAc < 2:1592047/150‑1 (MQ=255) acacCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCa < 1:1768732/150‑1 (MQ=255) acacCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCa < 2:1629350/150‑1 (MQ=255) cGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCCGTTGCACCTCCAGGaa > 2:801288/1‑150 (MQ=255) gTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAAc < 2:204216/150‑1 (MQ=255) ccATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGt > 2:1263850/1‑150 (MQ=255) cATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTa > 1:1659487/1‑150 (MQ=255) tctcCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCCTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGc < 1:802289/150‑1 (MQ=255) ccACGCTGCCCAACGCACGGCGCTCCAGCTGAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGc > 1:542788/1‑150 (MQ=255) ccACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGc > 2:1130635/1‑150 (MQ=255) cACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCt > 2:1728829/1‑150 (MQ=255) cACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTgg < 2:881761/109‑1 (MQ=255) cACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTgg > 1:881761/1‑109 (MQ=255) cACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAg > 1:1260013/1‑135 (MQ=255) cACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAg < 2:1260013/135‑1 (MQ=255) aCGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTc < 1:249714/150‑1 (MQ=255) gCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGc < 1:874589/150‑1 (MQ=255) ccAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGc < 2:613582/145‑1 (MQ=255) ccAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGc > 1:613582/1‑145 (MQ=255) cAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTtc < 1:1263850/150‑1 (MQ=255) cAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTtc < 1:1749944/150‑1 (MQ=255) cgaaCGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTtcgtc < 1:1000350/147‑1 (MQ=255) cGCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTtcgtc < 2:1400591/150‑1 (MQ=255) gCACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTtcgtcg > 1:223554/1‑150 (MQ=255) cACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGa > 1:1059392/1‑150 (MQ=255) cACGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGa < 2:675519/150‑1 (MQ=255) aCGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAg > 1:153669/1‑150 (MQ=255) cGGCGCTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAgg < 2:1641024/150‑1 (MQ=255) ggCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGc > 1:545466/1‑150 (MQ=255) gcgcTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCt > 1:331339/1‑150 (MQ=255) gcTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGt > 1:1898767/1‑150 (MQ=255) gcTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGt < 2:1260103/150‑1 (MQ=255) cTCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTc < 1:1596247/150‑1 (MQ=255) tCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCg > 2:1633021/1‑150 (MQ=255) tCCAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCg > 1:502323/1‑150 (MQ=255) ccAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGa < 2:1591688/150‑1 (MQ=255) ccAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGa < 1:514394/150‑1 (MQ=255) cAAGGAAGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGAt > 2:170643/1‑150 (MQ=255) cAAGGAAGCCGGGATGCTTTAGTGCCCGGACAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGAt < 1:972932/150‑1 (MQ=255) aGCCGGGATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCgg > 1:461126/1‑150 (MQ=255) gggATGCTTTAGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGa < 1:1461691/150‑1 (MQ=255) | TTGTGGCGTGATCAGCAACTGCCGGTGGCGGGCCAATTGTTGGCGGGTGACCCGGCCTTCGCCCGCCAGCGGGTGGCCGACCGCGCACACCGTGACCATCTCCACGCTGCCCAACGCACGGCGCTCCAAGGAAGCCGGGATGCTTTCGTGGAGGAAGAACAGGCCCAGATCGGCGCGCCGCTCCACCAGCTTGCGCGCCACATCGCCCTGGGCTCCGCTGGCCAGTTGCACCTCCAGGAACGGGTAGCGGCTCGCCAGTTCGTCGAGGCTGTCGATCACCGGCTGA > NC_002947/5609942‑5610227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |