New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4896423 = | 161 (0.660) | 37 (0.180) | 17/252 | 16.2 | 20.5% | intergenic (+11/‑197) | PP_4304/sbp‑I | VIC family cation transporter/sulfate ABC transporter substrate‑binding protein |
? | NC_002947 | 4896512 = | 149 (0.710) | intergenic (+100/‑108) | PP_4304/sbp‑I | VIC family cation transporter/sulfate ABC transporter substrate‑binding protein | |||||
Rejected: Coverage evenness skew score above cutoff. |
Only 100 of 177 total aligned reads displayed.
TTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAACTCTTCACCGCCTCGCTGCTCGCCGCAGGCCT > NC_002947/4896371‑4896660 | ctgttctCGCTGTGGGAATGGGTTGTTTCCCAACGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAg < 2:4825447/150‑1 (MQ=255) tgttctCGCTGTGGGAATGGGTTGTTTCCCAAAGAGTGATAGCGCCTGCGCCGGCCGCTTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCCGAGGAGCGGGTTTACCCGCGAAGATGCCGGCACAGGCAGAAGc > 1:3078879/1‑150 (MQ=39) tctcGCTGTGGGAATGGGTTGTTTCCCAACGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGG‑GTAAATCCGCTCCTCCAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATa < 2:3439042/150‑1 (MQ=255) tcGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCGTCGCCG‑GTAAATCCCCGACGACAGGCCCGGACCCTGCGCGGT‑CC‑‑‑CCCGGACGCGCGGGTTTAACCGCCAGGCGGCCGGCACAGGCAGAAGccaaac > 1:3471432/1‑145 (MQ=255) tcGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCGCTTCGCGG‑GTTAATCCGCTCCTACAGGCGCGGGCCCTGCGCGGTGCC‑‑‑CCCGTGGGGCGGGGTTTACCC‑CGACGAGGCCGGGCCAGGGCGAAGCAAAAc > 1:4710639/1‑150 (MQ=255) tgtgGGATTGGGTTGTTTCCCAATGCGTGATTGCGCCTGCGCCGGCCTCTTCGCGG‑TTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCaaa < 2:649937/150‑1 (MQ=39) tgtgGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGG‑GTAAATCCGCCCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCaaa > 2:4789695/1‑150 (MQ=255) ggtgGTATTGGGTTGTTCCCAAACGGTTGATAGCGCCTGCGCGGGCCTCTTGGCGG‑GAAAAGCCGCTCCTACTGGCGCGGACGGTGCGCGGT‑CC‑‑‑CCGGTTGGAGGGGTTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCaaa < 2:1323978/149‑1 (MQ=255) ggAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCCTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCAAAACCAAAGCAt > 2:5088971/1‑150 (MQ=255) gAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCGTCGCGG‑GTAAATCCGCTACTACACGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGGAGGAGCGGGTTTTCCCGCGAAGAGGCCCGCACAAGCAGAAGCATAACCaaaccctt > 1:3031274/1‑145 (MQ=255) atggggTTGTTGCCCAACGCGTGATCGCGCCTGCGCCGGCCTCTTCGGGG‑GTAAATCCGCTCCTACCGGCGGGGACGGTGCGCGGT‑CC‑‑‑CCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCAttt < 2:112561/147‑1 (MQ=37) gttgttTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGt < 2:3688548/150‑1 (MQ=255) tgttTCCCAACGCGTGATCGCGCCTGCGCCGGCCTCTTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAACGCATTTTTTGTTc < 2:5031524/150‑1 (MQ=255) cAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTCTGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCACAGCATTTTTTGTTCTTTAAcc > 2:2996020/1‑150 (MQ=255) aacgCGTTATCGCGCCGGCGCCGGCCTCTTCGCGG‑GAAACCCCGCGCCTCCCGGCGGGGCCCGTGCGGGGT‑CC‑‑‑CCCGTCGGCGCGGTTTACCCCGCTAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAAccc < 1:2537263/147‑1 (MQ=255) aTAGCGCCGGCGCCGGCCTCTTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAac < 2:2149929/150‑1 (MQ=255) ccTGGGCCGGCCTGTTGGGGG‑TTAATCCCGCTCCTCCCGGCGCGCACGGGGCGCGGA‑CC‑‑‑CCCGTCGCAGGGGTTTTACCCGCTAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAacccaccc < 1:2940343/150‑1 (MQ=255) gcgcCGGCCTCTTCGGGG‑GTAACCCCGCACCCCCCGGCGGGGACCGTGCGGGGG‑CC‑‑‑CCGTTTGGTGGGGTTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGtt < 1:84134/150‑1 (MQ=255) gcCGGCCTCTTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTtat < 2:1697033/150‑1 (MQ=255) ccGGCCTCTTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGGGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTtata < 2:5021049/150‑1 (MQ=255) cGGCCTCTTGGGGGTTTAACTCCGCTCCCACGGGGGGGTACGGGGGGGGGT‑CC‑‑‑CCGGTTGTTGGGTTTTAACCCGCGACTTGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTtatn < 1:228169/150‑2 (MQ=255) cGGCCTCTTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAg > 2:3571586/1‑150 (MQ=255) cGGCCTCTTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTGTGTTCTTTAACCCGTATAAACCCACCCGTTATAg > 2:555088/1‑150 (MQ=255) gCCTCTTCGCGG‑GTAAATCCGCTCCTACTGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCTAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTc < 2:2347139/150‑1 (MQ=255) ccTCTTCGCGG‑GTAAACCCGCTCCTACGGG‑‑‑GGACCGCGCACGGT‑CCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCGCAGGCGGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCg > 2:3473731/1‑150 (MQ=11) tctTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCt > 2:1857175/1‑150 (MQ=255) tctTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGATTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCt < 2:1682545/150‑1 (MQ=255) ttCGCGG‑GTAAATCCGCTCCTCCAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTGCTGTAACCCGTATAAACCCACCCGGTATAGTCGCTgg > 2:2621659/1‑150 (MQ=255) tCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGc > 2:334043/1‑150 (MQ=255) tCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTGTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGc > 2:198983/1‑150 (MQ=255) gg‑gTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCCATc > 2:5147578/1‑150 (MQ=255) gg‑gTAAACCCGCTCCTACGGG‑‑‑GGACCGCGCACGGT‑CCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCGCAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATc > 1:4999552/1‑150 (MQ=17) tAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGc < 2:948142/150‑1 (MQ=255) actCCGCTCCTACAGGCGCGGCCCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGTAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATcatgct < 2:1761428/148‑6 (MQ=255) aaTCCGCTCCTACCGGCGCGGACCGTGCGCGGA‑CC‑‑‑CCCGTAGGAGCGGGTTGACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGccc < 2:279916/150‑1 (MQ=255) aaTCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTATCCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGccc > 2:5269598/1‑150 (MQ=255) tCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAg > 2:3831654/1‑131 (MQ=255) tCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCa > 2:4225200/1‑150 (MQ=255) gCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAaca > 1:541399/1‑150 (MQ=255) gCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTGTTTGTTCTTTCACCCGTATAAACCCACCCGGGCTAGTCGCTGGCACTCTGCCCCaccc > 2:5107641/1‑147 (MQ=38) cTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAacac > 1:4705886/1‑150 (MQ=255) cTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTta > 1:5039452/1‑121 (MQ=255) cTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCt > 2:3621852/1‑150 (MQ=255) cTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCt > 2:314676/1‑150 (MQ=255) cTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCt > 1:1571214/1‑150 (MQ=255) cTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCt > 2:1821138/1‑150 (MQ=255) cTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCt > 1:3964280/1‑150 (MQ=255) tACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCACTCTGCCCCACCACCCtg > 1:3886215/1‑149 (MQ=255) tACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCtt > 2:4588221/1‑150 (MQ=255) aCAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTc < 2:4699363/150‑1 (MQ=255) ctacgggggACCGCGCACGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCa > 2:602953/8‑150 (MQ=255) cAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCa > 1:4621418/1‑150 (MQ=255) cggggcgGACGGTGGGCGGT‑CC‑‑‑CCCTTTGGAGGGTTTTTACCCGCTATGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCaa < 1:1154704/146‑1 (MQ=255) cggCGGGGACGGTGCGCGGA‑CC‑‑‑CCCTTCGTCGGGGGTTTCCCCGCTAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCaa < 1:1496485/149‑1 (MQ=255) aGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCaa > 1:5032555/1‑150 (MQ=255) aGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCaa < 2:4487188/150‑1 (MQ=255) aGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCaa < 1:4789695/150‑1 (MQ=255) aGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCaa > 1:5259056/1‑150 (MQ=255) gcgcGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGca < 1:264370/56‑1 (MQ=255) gcgcGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGa > 2:3676669/1‑150 (MQ=255) gggggACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGaa > 1:1056874/4‑150 (MQ=255) gcgGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAAc < 2:1572508/150‑1 (MQ=255) ggACCGTGCGGGGT‑CC‑‑‑CCGTTCGGTGGGGTTTTCCCCGCTATGTGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACaa < 1:191713/150‑1 (MQ=255) ggACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACaa > 1:410493/1‑150 (MQ=255) ggACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACaa < 2:4072869/150‑1 (MQ=255) ggACCGCGCACGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACaa > 1:3682397/1‑150 (MQ=255) ggACCGCGCACGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACaa > 1:990801/1‑150 (MQ=255) gACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAg < 2:774497/150‑1 (MQ=255) gACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAg > 1:774497/1‑150 (MQ=255) ccGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGa < 2:4694367/150‑1 (MQ=255) cGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTg > 1:5078026/1‑78 (MQ=255) tGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCATGAACACGGACGc > 1:2728748/1‑150 (MQ=255) gcgcGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCa > 1:2227078/1‑150 (MQ=255) gcgGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAAc > 1:1759061/1‑150 (MQ=255) t‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGa < 1:5356611/150‑1 (MQ=255) t‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGa > 1:3356944/1‑150 (MQ=255) cc‑‑‑cccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTCCAAGAACAAGGACGCAACGTGaa < 2:4981546/150‑1 (MQ=255) c‑‑‑cccGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGaaa < 2:506885/150‑1 (MQ=255) cccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGaaaa > 2:2709845/1‑150 (MQ=255) cccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGaaaa > 2:2586627/1‑150 (MQ=255) cccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGaaaa > 2:2586325/1‑150 (MQ=255) cccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGaaaa > 2:2057763/1‑150 (MQ=255) gtagtaGCGGTTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAAc < 1:1390723/150‑1 (MQ=255) tAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAAct < 2:1110274/150‑1 (MQ=255) aGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAActc < 2:2879649/150‑1 (MQ=255) ggggttttACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAACTCTTCa < 1:1173829/145‑1 (MQ=255) gggTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGt < 1:2589622/82‑1 (MQ=255) gggTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCAAAACCAAAGCATATTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCCCTGGCAATCTGCCCCAACAACCTTCAAGAACAAGGACGCAACGTGAAAAAActctaaacc > 1:1050087/1‑145 (MQ=255) ggTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAACTCTTCACCg > 2:2188633/1‑150 (MQ=255) gatttACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCTAGAACAAGGACGCAACGTGAAAAAACTCTTCACCg > 1:2123763/3‑150 (MQ=255) ccGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAACTCTTCACCGCCTCgct > 2:5096806/1‑150 (MQ=255) ccGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAACTCTTCACCGCCTCgct > 1:3116693/1‑150 (MQ=255) ccGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAACTCTTCACCGCCTCgct > 1:2922531/1‑150 (MQ=255) ccGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAACTCTTCACCGCCTCgct > 2:4176798/1‑150 (MQ=255) acgcgAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAACTCTTCACCGCCTCgct > 1:4322269/2‑150 (MQ=255) gcgAAGAGGCCGGCACAGGCAGAAGCATAACCACAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTGATAGTCGCTGGCCATCTGCCCCAACACCCTTCACGAACAAGGACGCAACGTGACAAAACTCTTCACCGCCGCgctgc > 2:1605797/1‑150 (MQ=255) ccGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAACTCTTCACCGCCTCGCTGCTCGCCGCAg > 2:2481108/1‑150 (MQ=255) cGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAACTCTTCACCGc > 2:3902940/1‑132 (MQ=255) cGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAACTCTTCACCGCCTCGCTGCTCGCCGCAgg > 1:4465601/1‑150 (MQ=255) cGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAACTCTTCACCGCCTCGCTGCTCGCCGCAgg > 1:2020788/1‑150 (MQ=255) | TTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGG‑GTAAATCCGCTCCTACAGGCGCGGACCGTGCGCGGT‑CC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAACACCCTTCAAGAACAAGGACGCAACGTGAAAAAACTCTTCACCGCCTCGCTGCTCGCCGCAGGCCT > NC_002947/4896371‑4896660 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |