New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5537079 =36 (0.960)5 (0.170) 5/216 3.4 13.2% intergenic (+8/+95) nadE/PP_4870 NH(3)‑dependent NAD(+) synthetase/azurin
?NC_002947 5537155 = 37 (1.230)intergenic (+84/+19) nadE/PP_4870 NH(3)‑dependent NAD(+) synthetase/azurin
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGCCGGTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5537252‑5537079
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggtgaacccgctcctgcaggGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCT  >  NC_002947/5537155‑5537288
                                                                                                                                                                                                                                                                                                                    
AGCCGGTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATT                                                                                                                                                                >  1:863137/1‑150
    GGTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCG                                                                                                                                                            >  2:789266/1‑150
     GTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG                                                                                                                                                           <  1:908911/150‑1
           ACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATAGTCAAGTGATCAAAGGCTAACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAAC                                                                                                                                                     <  1:64385/150‑1
            CTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGCTCACCCTCGTATTCGCGGGTGAACC                                                                                                                                                    >  1:704252/1‑150
                  ctgCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCC                                                                                                                                              >  2:685699/4‑150
                                         ACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGC                                                                                                                                           >  1:136899/1‑130
                                         ACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGC                                                                                                                                           <  2:136899/130‑1
                                                             AAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG                                                                                                                                                           <  1:774758/94‑1
                                                             AAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG                                                                                                                                                           >  2:774758/1‑94
                                                                                                       AGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTT                                                                                                               >  2:392808/1‑96
                                                                                                       AGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTT                                                                                                               <  1:392808/96‑1
                                                                                                                     CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCAC                                           >  2:261911/1‑150
                                                                                                                         GAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGA                                                                                                          >  1:778265/1‑83
                                                                                                                         GAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGA                                                                                                          <  2:778265/83‑1
                                                                                                                                                   ATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTCGACGATGACCTTGCCTTTCATCATCGAGA                                                                                  >  1:848837/1‑81
                                                                                                                                                   ATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTCGACGATGACCTTGCCTTTCATCATCGAGA                                                                                  <  2:848837/81‑1
                                                                                                                                                         GGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGG       >  1:447503/1‑150
                                                                                                                                                            TGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTT    <  2:27928/150‑1
                                                                                                                                                              AACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCT  <  1:693038/150‑1
                                                                                                                                                                   GCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTC   <  1:103988/144‑1
                                                                                                                                                                   GCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCATTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTC   >  2:103988/1‑144
                                                                                                                                                                        TGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAAGCTGGAAGcc                       >  2:56171/1‑117
                                                                                                                                                                                                                                                                                                                    
AGCCGGTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5537252‑5537079
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggtgaacccgctcctgcaggGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCT  >  NC_002947/5537155‑5537288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.