| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5038212 = | NA (NA) | 8 (0.210) | 8/270 | 3.1 | NA | coding (1256/1536 nt) | PP_4443 | transposase |
| ? | NC_002947 | 5038234 = | NA (NA) | coding (1278/1536 nt) | PP_4443 | transposase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CCTGGTGCCCAACGGATCAGCCACAGCCAAAGCCCTCGACTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCCGGGTCGCTGCGCAGTGGTAAACGAGCGGCTGCGATCA > NC_002947/5038156‑5038358 | ccgggTGCCCAACGGATCAGCCACAGCCAAAGCCCTCGACTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTc > 1:913614/4‑150 (MQ=1) gcggggTAGCGCTGACGCGCTACCTGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCCGTGTCGCTGCGCAGCGCTAAACGCGCGGCTGCGATCa > 2:107472/4‑150 (MQ=1) | CCTGGTGCCCAACGGATCAGCCACAGCCAAAGCCCTCGACTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCCGGGTCGCTGCGCAGTGGTAAACGAGCGGCTGCGATCA > NC_002947/5038156‑5038358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |