| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,061,559:1 | +C | 7.7% | intergenic (‑136/+52) | hupA ← / ← alkT | DNA‑binding protein HU‑alpha/rubredoxin‑NAD(+) reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,061,559 | 1 | . | C | 7.7% | 309.9 / 19.6 | 78 | intergenic (‑136/+52) | hupA/alkT | DNA‑binding protein HU‑alpha/rubredoxin‑NAD(+) reductase |
| Reads supporting (aligned to +/- strand): ref base . (39/33); new base C (2/4); total (41/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.26e-01 | |||||||||||
CTGGTTTGCGCATAGTGAAGCCTCTTTGACGGAATTCTTGTTGTTATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTCAGGGCGTAGCCCAGCAGCTTGCCGTCGGCAT > NC_002947/6061411‑6061705 | cTGGTTTGCGCATAGTGAAGCCTCTTTGACGGAATTCTTGTTGTTATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTgg‑g < 2:1253013/150‑1 (MQ=255) tGGTTTGCGCATAGTGAAGCCTCTTTGACGGAATTCTTGTTGTTATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGg‑gc < 1:1061623/150‑1 (MQ=255) tttGCGCATAGTGAAGCCTATTTGACGGAATTCTTGTTGTTATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGg‑gcggc < 2:842994/150‑1 (MQ=255) ctgggctacgccctgaccggagcggcggtgatggagaagctggcgctgaatcgtcagttgccaccggttatggcgtaaatagcgcgcgttctgtcggatttatcctgttgttgcctgcacaatGGCCGCGCCAG‑TATCTGG‑GCGGCCAtt > 2:809256‑M1/124‑150 (MQ=255) gcATAGTGAAGCCTCTTTGACGGAATTCTTGTTGTTATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATtg > 1:604063/1‑150 (MQ=255) gTGAAGCCTCTTTGACGGAATTCTTGTTGTTATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAg < 2:1194620/150‑1 (MQ=255) ctTTGACGGAATTCTTGTTGTTATGCCGTGCTGCCTCTGGGGGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAacaaca < 2:607828/150‑1 (MQ=255) tttGACGGAATTCTTGTTGTTATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAg > 1:1000932/1‑150 (MQ=255) tGACGGAATTCTTGTTGTTATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGCGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGa < 2:535553/150‑1 (MQ=255) aCGGAATTCTTGTTGTTATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATa > 2:429922/1‑150 (MQ=255) ttgttgTTATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACa < 2:604063/150‑1 (MQ=255) ttgttgTTATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACa > 2:1161934/1‑150 (MQ=255) tgttgtTATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAg > 1:934698/1‑150 (MQ=255) tgttATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAAc < 2:934698/150‑1 (MQ=255) ttATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAAcgc > 1:99678/1‑150 (MQ=255) aTGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAAcgcgc < 2:1000932/150‑1 (MQ=255) tGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCGATTGTGCAGGCAACAGCGGGATAAATCCGCCAGAAcgcgca > 2:271787/1‑149 (MQ=255) tGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGCCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAAcgcgcg > 2:790699/1‑150 (MQ=255) gCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACgcgcgc < 1:738249/150‑1 (MQ=255) ctgcCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTa > 2:883793/1‑150 (MQ=255) gcCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACg > 1:427230/1‑150 (MQ=255) gcCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACg > 2:47062/1‑150 (MQ=255) tctGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGa < 1:77763/127‑1 (MQ=255) tctGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGa > 2:77763/1‑127 (MQ=255) gggAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATaa > 1:127672/1‑150 (MQ=255) gcagcGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCgg < 1:429922/150‑1 (MQ=255) agcGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTg > 2:939251/1‑150 (MQ=255) agcGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTg > 2:53669/1‑150 (MQ=255) agcGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTg > 1:334231/1‑150 (MQ=255) aaGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGa > 2:1090001/1‑111 (MQ=255) aaGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGa < 1:1090001/111‑1 (MQ=255) aaGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTg > 1:839699/1‑150 (MQ=255) aaGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTg > 2:494129/1‑150 (MQ=255) ggCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGAc < 1:47062/150‑1 (MQ=255) ggCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAAATCATGTGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGAc > 2:179857/1‑150 (MQ=255) gCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCTCTATTTACGCCATAACCg > 2:1239912/1‑137 (MQ=255) gCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCTCTATTTACGCCATAACCg < 1:1239912/137‑1 (MQ=255) cACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGa < 2:1159446/150‑1 (MQ=255) cACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGa < 1:53669/150‑1 (MQ=255) cAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGAt > 2:533343/1‑94 (MQ=255) cAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGAt < 1:533343/94‑1 (MQ=255) gCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAgcgc < 2:334231/150‑1 (MQ=255) tctAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCa < 2:839699/150‑1 (MQ=255) tctAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCa > 2:138025/1‑150 (MQ=255) tAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGc < 1:494129/150‑1 (MQ=255) aTCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGa > 2:1044717/1‑133 (MQ=255) aTCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGa < 1:1044717/133‑1 (MQ=255) tGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAAc < 1:886628/117‑1 (MQ=255) tGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAAc > 2:886628/1‑117 (MQ=255) ggCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCAt < 1:138025/150‑1 (MQ=255) gCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATc > 1:1169888/1‑150 (MQ=255) aGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCAc < 2:508970/150‑1 (MQ=255) gACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAAc > 2:865471/1‑120 (MQ=255) gACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAAc < 1:865471/120‑1 (MQ=255) aCGGGAGTGAGAATGGCACGAGCTCAGGGGCTGCGCCAG‑GATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCAccg > 1:102536/1‑150 (MQ=255) aCGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCAccg > 2:485410/1‑150 (MQ=255) ttatcctgttgttgcctgcacaatGGCCGC‑CCAG‑ATACTGGCGCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACcgccgc < 1:794480‑M1/126‑1 (MQ=255) aGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCtt > 2:370329/1‑134 (MQ=255) aGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCtt < 1:370329/134‑1 (MQ=255) tGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAAt > 2:466080/1‑71 (MQ=255) tGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAAt < 1:466080/71‑1 (MQ=255) aaTGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTc < 1:485410/150‑1 (MQ=255) gCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTCAggg > 1:1273889/1‑150 (MQ=255) cACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTCAGGGc > 1:615750/1‑150 (MQ=255) gAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTCAGGGCGTa < 2:1273889/150‑1 (MQ=255) ctgcacaatGGCCGC‑CCAGATA‑CTGGCGCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTCAGGGCGTa < 1:462855‑M1/141‑1 (MQ=255) tgcacaatGGCCGC‑CCAGATA‑CTGGCGCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTCa < 1:770349‑M1/134‑1 (MQ=255) tgcacaatGGCCGC‑CCAGATA‑CTGGCGCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTCa > 2:770349‑M1/9‑142 (MQ=255) aGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTCAGGGCGTAg < 1:1161934/150‑1 (MQ=255) gcacaatGGCCGC‑CCAG‑ATACTGGCGCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTgg < 2:610616‑M1/87‑1 (MQ=255) gcacaatGGCCGC‑CCAG‑ATACTGGCGCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTgg > 1:610616‑M1/8‑94 (MQ=255) cTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTCAGGGCGTAGcc > 1:663354/1‑150 (MQ=255) cAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTCAGGGCGTAGCCca < 1:939251/150‑1 (MQ=255) aGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGa > 2:17337/1‑97 (MQ=255) aGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGa < 1:17337/97‑1 (MQ=255) gcCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTAtt < 1:344014/64‑1 (MQ=255) gcCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTAtt < 1:343925/64‑1 (MQ=255) gcCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTAtt > 2:344014/1‑64 (MQ=255) gcCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTAtt > 2:343925/1‑64 (MQ=255) g‑TATCTGG‑GCGGCCATTGTGCAGGCAACACCAGGATGAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTCAGGGCGTAGCCCAGCAGCTTGCCGTCg < 2:102536/150‑1 (MQ=255) cTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTCAGGGCGTAGCCCAGCAGCTTGCCGTCGGCAt > 2:1286363/1‑150 (MQ=255) | CTGGTTTGCGCATAGTGAAGCCTCTTTGACGGAATTCTTGTTGTTATGCCGTGCTGCCTCTGGGAGCAGCGCTCAAGGCACCGCAGGCTCTAATCTGCGGCAGACGGGAGTGAGAATGGCACGAGCTCAGGGGCCGCGCCAG‑TATCTGG‑GCGGCCATTGTGCAGGCAACAACAGGATAAATCCGACAGAACGCGCGCTATTTACGCCATAACCGGTGGCAACTGACGATTCAGCGCCAGCTTCTCCATCACCGCCGCTCCGGTCAGGGCGTAGCCCAGCAGCTTGCCGTCGGCAT > NC_002947/6061411‑6061705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |