| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 86765 | 31 (0.630) | 7 (0.160) | 6/218 | NT | 17.5% | intergenic (‑48/+97) | PP_0075/PP_0076 | choline sulfate transporter/choline betaine‑binding protein |
| ? | NC_002947 | = 86824 | 39 (0.910) | intergenic (‑107/+38) | PP_0075/PP_0076 | choline sulfate transporter/choline betaine‑binding protein | |||||
GGGCGAGGATGGCGCCGCTCAGGCCTACCAGCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/86609‑86765‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtgggagcgggcGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGCGACCCCTTAAGGATTGTGGATAACCCATGCATCGCCTCTCTTTACTGCTGCCCTTC < NC_002947/86824‑86688 GGGCGAGGATGGCGCCGCTCAGGCCTACCAGCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGG < 1:159541/150‑1 GAGGATGGCGCCGCTCAGGCCTACCAGCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCG > 1:1065068/1‑150 AGGATGGCGCCGCTCAGGCCTACCAGCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGG < 1:1011312/150‑1 GATGGCGCCGCTCAGGCCTACCAGCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGC > 2:767312/1‑150 CCAGCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGT > 1:772250/1‑120 CCAGCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGT < 2:772250/120‑1 GGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGC < 1:209216/150‑1 GGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAACAACGCGTTGGCTTTTTCGC < 1:485114/150‑1 AGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGC > 1:850303/1‑141 AGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGC < 2:850303/141‑1 AGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTG < 2:853328/150‑1 GATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCG < 1:234043/109‑1 GATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCG > 2:234043/1‑109 TGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGTCTTGGCGACCCCTTAAGGATTGTGGATAACCCATGCATCGCCTCTCTTTACTGCTGCCCTTC < 1:156528/150‑1 TGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGCGACCCCTTAAGGATTGTGGATAACCCATGCATCGCCTCTCTTTA < 1:363571/136‑1 TGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGCGACCCCTTAAGGATTGTGGATAACCCATGCATCGCCTCTCTTTA > 2:363571/1‑136 GGGCGAGGATGGCGCCGCTCAGGCCTACCAGCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/86609‑86765‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtgggagcgggcGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGCGACCCCTTAAGGATTGTGGATAACCCATGCATCGCCTCTCTTTACTGCTGCCCTTC < NC_002947/86824‑86688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |