| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 375301 = | 53 (1.080) | 7 (0.150) | 7/246 | NT | 11.4% | coding (588/1233 nt) | PP_0312 | electron transfer flavoprotein subunit alpha |
| ? | NC_002947 | 375332 = | 57 (1.180) | coding (619/1233 nt) | PP_0312 | electron transfer flavoprotein subunit alpha | |||||
GCTGACCGGCTCGGCGCACTCGGCAGCCGCCAGGATCAGGCGCGGCACAGTGCGTTGCAGGTCTTGCTGGCCGGCGCCGGCGCGGCCGATACACTGGCCGTCCTTGACCTGCCATACCCGGGTTGCCGGGCGCTCGCCCAGCG‑‑CGGCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/375451‑375301‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCTGCAACGCACTGTGCCGCGCCTGATCCTGGCGGCTGCCGAGTGCGCCGAGCCGGTCAGCGAAACCC > NC_002947/375332‑375458 GCTGACCGGCTCGGCGCACTCGGCAGCCGCCAGGATCAGGCGCGGCACAGTGCGTTGCAGGTCTTGCTGGCCGGCGCCGGCGCGGCCGATACACTGGCCGTCCTTGACCTGCCATACCCGGGTTGCCGGGCGCTCGCCCAGCG‑‑CGGCACC > 1:883156/1‑150GCTGACCGGCTCGGCGCACTCGGCAGCCGCCAGGATCAGGCGCGGCACAGTGCGTTGCAGGTCTTGCTGGCCGGCGCCGGCGCGGCCGATACACTGGCCGTCCTTGACCTGCCATACCCGGGTTGCCGGGCGCTCGCCCAGCG‑‑CGGCACC > 2:75898/1‑150 CGCACTCGGCAGCCGCCAGGATCAGGCGCGGCACAGTGCGTTGCAGGTCTTGCTGGCCGGCGCCGGCGCGGCCGATACACTGGCCGTCCTTGACCTGCCATACCCGGGTTGCC‑‑GCGCTGGGCGAGCGCCCGGCAACCCGGGTATGGCAGG < 1:984349/150‑1 ATACCCGGGTTGCCGGGCGCTCGCCCAGCG‑‑CGGCACCCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCTGCAACGCACTGTGCCGCGCCTGATCCTGGCGGCTG > 1:246619/1‑135 ATACCCGGGTTGCCGGGCGCTCGCCCAGCG‑‑CGGCACCCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCTGCAACGCACTGTGCCGCGCCTGATCCTGGCGGCTG < 2:246619/135‑1 CCGGGTTGCCGGGCGCTCGCCCAGCG‑‑CGGCA‑CCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACC > 1:465396/1‑94 CCGGGTTGCCGGGCGCTCGCCCAGCG‑‑CGGCA‑CCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACC < 2:465396/94‑1 CGGGTTGCCGGGCGCTCGCCCAGCG‑‑CGGCACCCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCTGC < 1:1177590/97‑1 CGGGTTGCCGGGCGCTCGCCCAGCG‑‑CGGCACCCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCTGC > 2:1177590/1‑97 CCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCTGCAACGCACTGTGCCGCGCCTGATCCTGGCGGCTGCCGAGTGCGCCGAGCCGGTCAGCGAAACCC > 1:976244/1‑128 CCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCTGCAACGCACTGTGCCGCGCCTGATCCTGGCGGCTGCCGAGTGCGCCGAGCCGGTCAGCGAAACCC < 2:976244/128‑1 GCTGACCGGCTCGGCGCACTCGGCAGCCGCCAGGATCAGGCGCGGCACAGTGCGTTGCAGGTCTTGCTGGCCGGCGCCGGCGCGGCCGATACACTGGCCGTCCTTGACCTGCCATACCCGGGTTGCCGGGCGCTCGCCCAGCG‑‑CGGCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/375451‑375301‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCTGCAACGCACTGTGCCGCGCCTGATCCTGGCGGCTGCCGAGTGCGCCGAGCCGGTCAGCGAAACCC > NC_002947/375332‑375458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |