| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 401316 | NA (NA) | 9 (0.200) | 8/224 | NT | 21.8% | coding (899/1059 nt) | PP_0334 | transposase |
| ? | NC_002947 | = 401372 | 36 (0.730) | coding (955/1059 nt) | PP_0334 | transposase | |||||
TTCGGTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑Atgatcgccgcctc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/401168‑401316‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGCCCAATC < NC_002947/401372‑401211 TTCGGTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑AT > 1:455747/1‑150 GTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACGTACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATC < 2:1004865/150‑1 GTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATC < 2:1052641/150‑1 GCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGCCT > 2:1060956/1‑150 ACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGC > 1:1248185/1‑150 ATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGA < 2:153192/150‑1 GCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGG < 2:455747/150‑1 AAGATGCGCAAGCGCGGTGACGGCTACAGACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATAAGCCAG‑ATGATCGCCGCCTCCTTGCGCACAAGGCGGGATAGCCAGCGCAAGAGatcgga > 1:557672/1‑144 AGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGA < 2:1248185/150‑1 ATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGC < 1:1084751/81‑1 ATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGC > 2:1084751/1‑81 GCAGCCTGATGATCCAGGGCGCGCATTCCGTATTGAGCCAGCTAAGGCCTGATTCCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATC > 1:711134/1‑135 GCAGCCTGATGATCCAGGGCGCGCATTCCGTATTGAGCCAGCTAAGGCCTGATTCCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATC < 2:711134/135‑1 CTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGG < 1:291103/112‑1 CTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGG > 2:291103/1‑112 ATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATC < 1:376976/150‑1 CCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCGTCTTac > 2:488769/1‑148 CCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGC > 2:85053/1‑150 CGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGCC < 2:1029388/150‑1 CGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGCC < 1:285301/150‑1 CGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGCC < 2:492600/150‑1 GCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGCCC > 2:748314/1‑150 GCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGG < 1:1230806/111‑1 GCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGG > 2:1230806/1‑111 TCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGTCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGCCCAAT < 2:832141/150‑1 TCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATATTGCCCAAT > 1:1267565/1‑150 TCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCA < 1:988280/63‑1 TCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCA > 2:988280/1‑63 CCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGCCCAATC < 2:363708/150‑1 TTCGGTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑Atgatcgccgcctc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/401168‑401316‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGCCCAATC < NC_002947/401372‑401211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |