New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 461367 | 45 (0.920) | 3 (0.070) | 3/234 | NT | 6.4% | coding (1101/2301 nt) | pqqF | coenzyme PQQ synthesis protein F |
? | NC_002947 | = 461389 | 46 (1.000) | coding (1079/2301 nt) | pqqF | coenzyme PQQ synthesis protein F |
GCGCGGGCGGAAGCTGGTCACTGATCTTCAGCGCTGCCGGCAGCGGTTGCGCCTTGGCATGGGGCAGGTCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/461216‑461367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaagcTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCTGGAAAGCCTGCCAGGTGCCGACCATGGCGATTGGCAGCTGCTGCCAGTCGACCCATTGCTGAAGGCTGACCTGCCCCATGCCAAGGCGCAACCGCTGCCGGCAGCGCTGAA < NC_002947/461389‑461242 GCGCGGGCGGAAGCTGGTCACTGATCTTCAGCGCTGCCGGCAGGGGTTGCGCCTTGGCATGGGGCAGGTCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATAGTCGGCACCTGGCAGGCTTTCCAGCAGGCCGCCAA > 2:932323/1‑150 GCAGCGGTTGCGCCTTGGCATGGGGCAGGTCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGCTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCT < 2:61112/150‑1 CCTTGGCATGGGGCAGGTCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGCTGGATACCCAAGGGTTGCAGGCGCTTGGC < 1:557317/130‑1 CCTTGGCATGGGGCAGGTCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGCTGGATACCCAAGGGTTGCAGGCGCTTGGC > 2:557317/1‑130 TCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGC > 1:741147/1‑84 TCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGC < 2:741147/84‑1 GCCAAGCTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCTGGAAAGCCTGCCAGGTGCCGACCATGGCGATTGGCAGCTGCTGCCAGTCGACCCATTGCTGAAGGCTGACCTGCCCCATGCCAAGGCGCAACCGCTGCCGGCAGCG > 2:625868/1‑150 CCAAGCTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCTGGAAAGCCTGCGAGGTGCCGACCATGGCGATTGGCAGCTGCTGCCAGTAAACGCATGTCTAAAGGCTGACCTGCCCCATGCCAAGGCGCAACCGCTGCCGGCAGCGC > 2:304422/1‑150 CCAAGCTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCTGGAAAGCCTGCCAGGTGCCGACCATGGCGATTGGCAGCTGCTGCCAGTCGACCCATTGCTGAAGGCTGACCTGCCCCATGCCAAGGCGCAACCGCTGCCGGCAGCGC > 2:160264/1‑150 GCTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCTGGAAAGCCTGCCAGGTGCCGACCATGGCGATTGGCAGCTGCTGCCAGTCGACCCATTGCTGAAGGCTGACCTGCCCCATGCCAAGGCGCAACCGCTGCCGGCAGCGCTGAA < 1:756869/150‑1 GCGCGGGCGGAAGCTGGTCACTGATCTTCAGCGCTGCCGGCAGCGGTTGCGCCTTGGCATGGGGCAGGTCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/461216‑461367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaagcTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCTGGAAAGCCTGCCAGGTGCCGACCATGGCGATTGGCAGCTGCTGCCAGTCGACCCATTGCTGAAGGCTGACCTGCCCCATGCCAAGGCGCAACCGCTGCCGGCAGCGCTGAA < NC_002947/461389‑461242 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |