| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 529914 = | 40 (0.820) | 6 (0.130) | 6/228 | NT | 12.2% | intergenic (+8/‑176) | PP_5SC/birA | 5S ribosomal RNA/bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA |
| ? | NC_002947 | 703050 = | 50 (1.120) | intergenic (+44/‑215) | PP_5SD/PP_0598 | 5S ribosomal RNA/paraquat‑inducible protein A | |||||
GGCATGATAGCCATGGGCTGTTGGCTTGCATAGGAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTACCTGCATGCGCAGATAGGGGTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/530064‑529914‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggggttttgTCTTTGGTGGG‑AAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAGGGGCGCACCCCCGCACACTCTTCAGGA > NC_002947/703050‑703195 GGCATGATAGCCATGGGCTGTTGGCTTGCATAGGAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTACCTGCATGCGCAGATAGGGGTTTT < 1:108308/150‑1 TAGGAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCT < 1:108646/124‑1 TAGGAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCT > 2:108646/1‑124 CAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTATCTGCGCATGCAGGTAGGGGTTT > 1:490186/1‑85 AACCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGCAGA > 1:763910/1‑85 AACCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGGCAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGCAGA < 2:763910/85‑1 CCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGG‑AAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGG > 1:618254/1‑133 CCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGG‑AAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGG < 2:618254/133‑1 ACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGG‑A < 1:174826/38‑1 ACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGG‑A > 2:174826/1‑38 GGGGTTTTGTCTTTGGTGGG‑AAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCG < 1:478921/77‑1 GGGGTTTTGTCTTTGGTGGG‑AAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCG > 2:478921/1‑77 GGGTTTTGTCTTTGGTGGG‑AAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGT > 1:1087209/1‑113 GGGTTTTGTCTTTGGTGGG‑AAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGT < 2:1087209/113‑1 TTTGTCTTTGGTGGG‑AAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAGGGGCGCACCCCCGCACACTCTTCAGGA < 1:950321/150‑1 GGCATGATAGCCATGGGCTGTTGGCTTGCATAGGAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTACCTGCATGCGCAGATAGGGGTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/530064‑529914‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggggttttgTCTTTGGTGGG‑AAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAGGGGCGCACCCCCGCACACTCTTCAGGA > NC_002947/703050‑703195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |