| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1036524 = | 57 (1.160) | 3 (0.070) | 3/232 | NT | 5.6% | coding (226/591 nt) | PP_0895 | hypothetical protein |
| ? | NC_002947 | 1036569 = | 49 (1.080) | coding (271/591 nt) | PP_0895 | hypothetical protein | |||||
AGTTTGTGTGCGTAGGACTCGCGCTCGATGAAGAAGCGAACCCCCAGGCCCTGTCCGCGGTATGCCGGCAACACCAGCGACTCACCGAAGTAGTACACACTGGCCGGGTCGCGCCCCTGGGCCAGGAATGGCTGCTGGAATTCGGGCGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1036675‑1036524‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcgacCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGCCGAGTTCGATTACTGCGCGTTCTGCGCGGTCGAG > NC_002947/1036569‑1036712 AGTTTGTGTGCGTAGGACTCGCGCTCGATGAAGAAGCGAACCCCCAGGCCCTGTCCGCGGTATGCCGGCAACACCAGCGACTCACCGAAGTAGTACACACTGGCCGGGTCGCGCCCCTGGGCCAGGAATGGCTGCTGGAATTCGGGCGCG > 2:964048/1‑150 CACACTGGCCGGGTCGCGCCCCTGGGCCAGGAATGGCTGCTGGAATTCGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGC < 1:110815/129‑1 CACACTGGCCGGGTCGCGCCCCTGGGCCAGGAATGGCTGCTGGAATTCGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGC > 2:110815/1‑129 TCGCGCCCCTGGGCCAGGAATGGCTGCTGGAATTCGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAAC > 1:572415/1‑150 GCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGCCGAGTTCGATTACTGCGCGTTCTGCGCGGTCGA > 1:1086590/1‑150 CGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGCCGAGTTCGATTACTGCGCGTTCTGCGCGGTCGAG < 2:572415/150‑1 AGTTTGTGTGCGTAGGACTCGCGCTCGATGAAGAAGCGAACCCCCAGGCCCTGTCCGCGGTATGCCGGCAACACCAGCGACTCACCGAAGTAGTACACACTGGCCGGGTCGCGCCCCTGGGCCAGGAATGGCTGCTGGAATTCGGGCGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1036675‑1036524‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcgacCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGCCGAGTTCGATTACTGCGCGTTCTGCGCGGTCGAG > NC_002947/1036569‑1036712 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |