| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1147959 = | 53 (1.080) | 5 (0.110) | 6/236 | NT | 9.5% | coding (110/2589 nt) | PP_1006 | heme receptor |
| ? | NC_002947 | 1147991 = | 45 (0.970) | coding (78/2589 nt) | PP_1006 | heme receptor | |||||
CATCACCTATAACAGCCCGCGCGTCTGGGAGCGCTTCCGATGTCCACTGGTCCTACCCGCTCGTCCAACCTTCCCCGCCGTACAGGACAACTGTCCCTGTTGACCCTTGCCCTGCTCGCCAGCGGCGCCTGCAGCCTGC‑‑‑CGGCGCTGG‑‑‑‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1148107‑1147959‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgg‑‑‑‑cGAGCAGGGCAAGGGTCAACAGGGACAGTTGTCCTGTACGGCGGGGAAGGTTGGACGAGCGGGTAGGACCAGTGGACATCGGAAGCGCTCCCAGACGCGCGGGCTGTTATAGGTGATGGCTGTTCTCGTTCTCAAACAAGAATCAGT > NC_002947/1147991‑1148136 CATCACCTATAACAGCCCGCGCGTCTGGGAGCGCTTCCGATGTCCACTGGTCCTACCCGGTCGTCCAACCTTCCCCGCCGTACAGGACAACTGTCCCTGTTGACCCTTGCCCTGCTCGCCAGCGGCGCCGGCAGGCTGC‑‑‑AGGCGCcgctg < 2:599718/150‑6 ACAGCCCGCGCGTCTGGGAGCGCTTCCGATGTCCACTGGTCCTACCCGCTCGTCCAACCTTCCCCGCCGTACAGGACAACTGTCCCTGTTGACCCTTGCCCTGCTCGCCAGCGCCG‑‑‑GCAGGCTGCAGGCGCCGCTGG‑‑‑‑CGAGCAGGGCAAG > 1:654048/1‑150 CGCGTCTGGGAGCGCTTCCGATGTCCACTGGTCCTACCCGCTCGTCCAACCTTCCCCGCCGTACAGGACAACTGTCCCTGTTGACCCTTGCCCTGCTCGCCA‑‑‑GCGCCGGCAGGCTGCAGGCGCCGCTGG‑‑‑‑CGAACAGGGCAAGGGTCAACA < 2:654048/150‑1 AACTGTCCCTGTTGACCCTTGCCCTGCTCGCCAGCGGCGCCTGCAGCCTGC‑‑‑CGGCGCTG > 1:597542/1‑59 AACTGTCCCTGTTGACCCTTGCCCTGCTCGCCAGCGGCGCCTGCAGCCTGC‑‑‑CGGCGCTG < 2:597542/59‑1 TTGCCCTGCTCGCCAGCGGCGCCTGCAGCCTGC‑‑‑CGGCGCTGG‑‑‑‑CGAGCAGGGCAAGGGTCAACAGGGACAGTTGTCCTGTACGGCGGGGAAGGTTGGACGAGCGGGTAGGACCAGTGGACATCGGAAGCGCTCCCAGACGCGCGGGCTGTT > 2:621218/1‑150 CCTGCTCGCCAGCGGCGCCTGCAGCCTGC‑‑‑CGGCGCTGGCCGCCGAGCAGGGCAAGGGTCAACAGGGACAGTTGTCCTGTACGGCGGGGAAGGTTGGACGAGCGGGTAGGACCAGTGGACATCGGAAGCGCTCCCAGACGCGCGGGCTGTT > 1:718119/1‑150 CTGCAGCCTGC‑‑‑CGGCGCTGGCCGCCGAGCAGGGCAAGGGTCAACAGGGACAGTTGTCCTGTACGGCGGGGAAGGTTGGACGAGCGGGTAGGACCAGTGGACATCGGAAGCGCTCCCAGACGCGCGGGCTGTTATAGGTGATGGCTGTTCT < 2:718119/150‑1 C‑‑‑CGGCGCTGG‑‑‑‑CGAGCAGGGCAAGGGTCAACAGGGACAGTTGTCCTGTACGGCGGGGAAGGTTGGACGAGCGGGTAGGACCAGTGGACATCGGAAGCGCTCCCAGACGCGCGGGCTGTTATAGGTGATGGCTGTTCTCGTTCTCAAACAAG < 1:621218/150‑1 CGCTGG‑‑‑‑CGAGCAGGGCAAGGGTCAACAGGGACAGTTGTCCTGTACGGCGGGGAAGGTTGGACGAGCGGGTAGGACCAGTGGACATCGGAAGCGCTCCCAGACGCGCGGGCTGTTATAGGTGATGGCTGTTCTCGTTCTCAAACAAGAATC > 2:135359/1‑150 TGG‑‑‑‑CGAGCAGGGCAAGGGTCAACAGGGACAGTTGTCCTGTACGGCGGGGAAGGTTGGACGAGCGGGTAGGACCAGTGGACATCGGAAGCGCTCCCAGACGCGCGGGCTGTTATAGGTGATGGCTGTTCTCGTTCTCAAACAAGAATCAGT < 1:135359/150‑1 TGG‑‑‑‑CGAGCAGGGCAAGGGTCAACAGGGACAGTTGTCCTGTACGGCGGGGAAGGTTGGACGAGCGGGTAGGACCAGTGGACATCGGAAGCGCTCCCAGACGCGCGGGCTGTTATAGGTGATGGCTGTTCTCGTTCTCAAACAAGAATCAGT < 1:322319/150‑1 CATCACCTATAACAGCCCGCGCGTCTGGGAGCGCTTCCGATGTCCACTGGTCCTACCCGCTCGTCCAACCTTCCCCGCCGTACAGGACAACTGTCCCTGTTGACCCTTGCCCTGCTCGCCAGCGGCGCCTGCAGCCTGC‑‑‑CGGCGCTGG‑‑‑‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1148107‑1147959‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgg‑‑‑‑cGAGCAGGGCAAGGGTCAACAGGGACAGTTGTCCTGTACGGCGGGGAAGGTTGGACGAGCGGGTAGGACCAGTGGACATCGGAAGCGCTCCCAGACGCGCGGGCTGTTATAGGTGATGGCTGTTCTCGTTCTCAAACAAGAATCAGT > NC_002947/1147991‑1148136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |